XLOC_043130 (gene) - C. hemisphaerica

Overview
NameXLOC_043130
Unique NameXLOC_043130
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_496:571096..580453+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043130 ID=XLOC_043130|Name=XLOC_043130|organism=Clytia hemisphaerica|type=gene|length=9358bp|location=Sequence derived from alignment at scaffold_496:571096..580453+ (Clytia hemisphaerica)
aaaaaactgaagcACAGACGAACCAACAGTCCCAAGGCAAGGACATACAG CAATCATTCTGACCCTGACacgttttaatgggtaattttATCTTgtttag ttttattttattataattCTCGAATGTTTAATCTATCAACCTATTCGCTG TCAAGTGAAGTGGAACCTTGTTTTGCCTTCTCCTTTTTTTAATAGTCGTT TGACATTTGCCAGCCAGTTTTCAGAGTATGGCAGAAATCATTGAGATCTC GAGGGCAGAGAACCGCTCACTTTTCAAGAGCAGgggcaaaattttgataa tatctaCAACTCAGaggaaaaatcattgaaaactgGCTATATTTGCCTGT TTTTCTGGCTATTATTGTGGTGGGAAACGGATCTTTTAGGAGCAGAGCAG GACCCTCCCGCGTCTTCCGGAGTTTTCCggagcagctaaaaaaacactat ttttctctccgGAAATTTCCAGATCTCTTCCGGTGCTTCCAGAGTAAGTG ATTTTTAACACGttctaaaaaaacgtttaaacatggttaaagatagcaac tccagaagtcaggcaactttcgttgacgtcaaaccaaatgtttcattttt ccgtgaactttgaacccttccaAAATTTTTCTCTATGTATATAtatatgc taaagcgttccagtatttactaaaagaaagcctGTGATCACAGGTGATCA ATCTGTGATcaatcttagctttccagcggtatataacactgtggactcag gctagacggcaaattggtaaagtgCCAAacgtttttgcaacatttttaga aatgttttcaGACGGGAGAAAAATAAGGTGCAACTATCCATGAACAAATG TTTCTGAAAATGGAGGAAATTGTAGtcgaaggctgaaactttgtatgttt atcagaaaaagggtgaggaattcaacaaatcacaatcgctaattttagtt ctttgattttcatgtagtttttttcgcttttttgcttttttagcatggga atgtcccaaaaaaagtttatatttctgccgaaatggattttcttttcatt tggggtttctcctttcagaaaaacttattctttacttataACCTTTTGTT CCTcgatttccagaggccccttgaaaatgggtcctatcaccttttttgac taatttcaacctttttcaagctaattttcttcaaataaaataatgcaatg tcttcttttttcaaaaaaagatatatctttcgttattttcataaatatac taaatattttacaaatatttttatataataatattctaacaccatcaaag aattctccctccaaatttcaggtctctagcccTTTAACTGCCattcgtat tttttaaggttcgacctatttgccatgggaaaaaaagaaggttcgaccta tttgccgacatgggcaaaagttagcgattttgacttcattttctgaagaa tatatgaagtatcagccaaggactataattttgagttgaacattgttgaa tagttatttctcaacatagaaaagcttttaactattatcttttttcattt caaaccatctaatacaaaatctttgtagaagtgtTATATAAATTTTGCag caaagaaatggaaagtgcCCATGTCTGCAAGTCTCGACATCGGCAAAGAA ATTGAAAGtacccatgtcggcatatgccgacatcggcagttaaagggcta gctacactagaaaaagagatatgcaaaattaaagaagCCTGACTgggaaa tatcttttttttcttttttgacacattttttgaatttttccaagctattt ttctaaccttttttttgacatttttagtcaaatttttgacactaaaattt gaatatctttacaaccacttatcctctggaggcctatgacccattttctt tctttttcaaagctctacaagataggttaggttttgaaaaaaaaaaatat ttgaaaaatctttgggAGTTGCTATAAAAGAAATATGCAGATGTTTTTAA TAACATACTTACAGTCTTTATTGAGGATGATGGTTCAcccattaatgaaa ttgaatttgtcacaaTATATTCGAAAGCATGAGGTTTCACTGAGTCACAT GAGTCGGCGCTATCGTAATTACATCACAGATATCTTGCTCTGGTTTGTTC CGTAGTTCCAGTGCAGACCAAATGTTGAAAATCATGCTCGGAAGTGCTCC GGAATCTTCCGGTGTTCCCGGAGCACAAAAAAACGGCACTTTTTGCTCCA GATGTTTCCGGAGCGCTGGGAGGGTCCTGGCAGAGCTTTATGttggaaat tttcctttgggggcaaccatgacatgctctgaaaactgGGTCATTTGGGA GGTGTTTGGCAATCTATCTTCTATTCTTCTGTGGGCTTGATATCAGACAA ACACTCAGCGCTCTCATCAAAAGACTTGGGTCGTTCTACTGTTTGTTCTT TTGTCAAGTCTGTTGGTCCtattctttttatatatttatttttttacaaa acagTTCTCTCTATCGAAATGGGGCAGTTCAGTTCCAGTTATTATAGTCT GCTACCCCCTGTGGACGACATGGATTTTCTGTAACAATTTACCTTTGAGA AACTTCAGGATTTCCGTTACATTAaagatttcttaggaaaaaatCCAGGG TTTTCCGATACCTggcaagaaaatagagcaaattttTATGGATTTCTGAT ACTGATGACAGAATAAGGAGGAAAAACCCTTAATTTTTTGtatccttttt ttaattttcttaggatttccaagtgaaaagaaattcgaaaaatctATGTT GTCCACAGGGGGAGGGGGTGGGAGTTATGGTTatttttctggaactgccc aATAAAAGTCCAACTATGACGTTGaccctttttctttcaaataaaaagag aaatctCAAGCATTGATAACTCAATTAATACCGTGaaatcgggtaacttg catcagtggaagaaaacttgcatagccatcatcAAAGGCCTGACCAacca aaacagcaaaatttcaaaataattgaacTACGGAGCTCCGCTCTCAGCTT GTCTCTCGATGGCTGCTGGATATGTAACCTCGAATTTAATAATGATATTA AACATAATTTAATTGTGCATGACATCACTTATGATTAGGAGATATACATT TTACCACCCGCAGattttgtaaatcaggtttgttttgatttaactttgta ttttaatgaccagccaggtcttcatttgagggctatgcatgttagcctcc actgatgctcCTTCTTTTTGCAATGTTTCTTATTCAATTAGACCtgtact ctttcaaaaaataaggataaagAAGTCTTTGCCCTCTAAAGACAGAccgt ttttattttagttgtttttggaaggtaaaaaaaatgaatcaatgcTTTTA CTTGAAAATAAGGGATTTCAAATCTGTTTTTCATGCTGGTTTCCTTTTct tttgattatatttttcaactcctagtttttccattttttgtcgTATGGAA TTTTTGTGGTTTTCTTTCAAACTCTTTCAAACTCAAAAATTATCAAGAAC AAGATGCAAAGTTAAGCCAGAAAGCAAACTCTAGTCTGATTTTTGGGAAG TATCTccgaaaattagaaaatcaggGTTCAACTTTTGGcccaaaattgga aaattgaagaaatgtttattctaaaagaaaaattttctggaaaaagCTGG AAAATCTCAgagactttttctaaaaatttaaaatgcatGAGAAATCAAAT TGTTCAAACATTGCATCAGGCAGTGTGGAAATATGTGAAAGTTGGCATTT CTCCGTACagctacttgtttcaaataaacgtgCAGGTCCTAGAGGAAAGG GATGGACGTTTATTTAAGGGGTATCTATTCAAAGTaagaagaaaaaggaa gaaaacagGAATAAATAGATCAGGAATAGATCAGTCTGAGAATTCTTTTA TGTGCCTAACTTTTGAGGACTTATTCCAGACTACAGTTTTATTTGTAGTT GTTAGTATGGGTGTTTGTAAAGTTAGTTCTGTACTGCCAAAATTTTGATA ACATATTTCACAATTTTGAGaagtaaaaatatttatgtGGTCCGTTTATC TCCAAGAATTTGGTCTGTAGAATAGGGATCAACCATTGTCTCGTTTTTCG AAAATGGATTCAACTTCTCTTTTATGCTTGAAGTAGAAGATCTTAATCTT CTCTTGACACCTTcgtaaatatatttttggaaatatgcCATTCAGTTATT CTGCATTGGTCTTCCTAGTTAAGCCAACTGCCTCATAAATGTTTAGACAG GCTTATACTGCTAAAAAACTTTATGTCTTTAAAACTCCACTTTGTTcaga ttaaaattaaaaagtgtacGTCATAATAATCAGTCAATGTGAGAAGTGTC TAAAAAACAATATGCCTGGTAATAAATTGGATGATTATGATGTTGTGTGC ACGATTGGAAGTGGGTCATATGGCACATGTAAAAAGATAAANTGATTATG ATGTTGTGTGCACAATTGGAAGTGGGTCATATGGCACatgtaaaaagata aaaaggaAAACTGATGGCAAGGTAAAAATTCATTTTACTCAGTTCTagta tatttttacatgtaggTATGATTTATGAATCATGTTTAGCAAAATTTTAT GCCTTATAAAATGGAAACAGAAAAATTGTCAAGTAGCACTTTCTTTATTT TGCCAAAAACCTTTATGtctttttttgcatttaaaCAGTAAAGACAGCGG GATTATGCTGGGTCATAACCTAGGATAAGCTTTTTCTAAGGAAATTGCCA ACAAAAATCCAATTTAAAGCATTTAAAGAAGTGATTTTTCACCTTAAAAT TATTACATTGAATTTGTGCTGCTATTAAATATTCTATTGAACTTCATTTG TAGATCAGGGTTTGGAAGGAGCTTGAGTACGGCTCCATGACAGATGAAGA GAAGAAACTACTCGTTTCTGAAGTCAATTTACTGCGAGAGCTCAAACATC CAAACATTGTTCGATACCACGACAGAATCATTGATCGAGGGTCAACGAAG ATATACATTGTAATGGAGTTTTGTGAAGGTGGTGATTTAGCAGCATATAT TTTGAAGTACAGGAAACAAAGGTTTGTAGATTAGATTTGCTACTTTAGTC CCCTAGCCCAGAAAAGCACGCCACTCTTTAATTCCTTTGGATTTTTAAGA GGATatcaattattttaaaaatatactcCTGAAAGTGCTAATTTTCGACT GTAAAAATAATACTAGGACCCCTTTAAAGGATTTTTGACACTTCTACTAT AGCTGCACTAATCCTTTGTATAGTTTCGAACACTTTCTGAGAATTCAAAG TTGTTGCAATCTTCTCTAAAGTAAAATCGTCTGAGCCCTTCTGTACGGTT TTAACACGTTCTGAAAGTTTCGAGTtgcttcaattttttattttggaaga CCTGTCTCACAAATTAGCTTTGCTTatcattttgtctttttttctttaag aaaatttGTCGACGAGGCGTTCATCTGGAAAGCACTCTACCAACTATCAT TGGCTCTCAGTGAGTGTCACTTGCAGTCCAGGGGTGGAAGCTCTGTTCTT CATAGAGATCTCAAGCCTGCAAATGTTTTCCTAGATTCCAATAACAATTG CAAACTTGGTGATTTTGGACTGGCACGAGTATTGAATCATGATACAAGCT TTGCTAAAACTTTTGTTGGAACGCCCTATTATATGTCACCAGTAAGTTGA ACCCTTCACCTTAAAACGTTCAGTTCTTCATGGAAAAGGAAATTGTTGAT TTTTGAACCCATTAACCAATAAATTTGCTCATTCGTTTACTCCGCCCACC CATTGATCCATCAATTCCTCAGTAtatccattcattcattcattcattta ctGGCATCTGTCCATCCATTCATTCAATTCGCCTGGTCCATTCATCAATT GATGAATGAATACATCCCCTCATTCATTCTCTCATACATACATTCATTCA TCTCTTCGCTCGTCTTATACCTATTCATCATTTCATGTTTGAAATTTAtc tactttaatttttttttatttgacgtttATTTGACTTtggtttccttaaa aaataaatGGCTCTTGCCCCTTTTTATAATAATATGATTCAGATCGCGAA ACTGTTTTGAAAAGCTCGATTCGCGAAAGTTGATTTTTgcgaaaactttt ttcttcaaaagcttCTTTCCCTAACTAAGGCACAACTTTTTTCACACCCA GGAATTGGTGAACAGAACGAATTACAACCAAAAATCCGACATCTGGTCAT TGGGATGTTTAATTTACGAATTGACTGCGCTAATGCCTCCTTTCTTGGCT GCTAATCAAAAATTACTGGCAATGAAGATCAAGGATGGACACTACCGACC CATACCTACACATTATAGCAAAGACCTGGAAACAATTATCAAGAAAATGT TGACTGTAGTGGTGGGTTAAATTCAgtttttacattattttttcaGCACA AACTGTTACAAGCTGTTAAACTGTAGGGGTTAACTGGAAAAAAGTTATCG CGAATACCTATTATAGTAAAAAAAGTCAGCACATatagggcttttccaga aaaaaatttgattatgGGGGGCATCAGTTGACTCCACGGACAACCCAAAT CACCCctggacagagcaaatttatcccccggacaaggcaaattttgatga tccCCGGAcaatatcctccatcccccatgtacgaacattttctggaagaa cccATATCTGGAAAATGtatctttcctttttttaagcatatgctaagcat taccCTGAGTTGAGCCTACATttctgattttggctttttttgctaggatt ttacagattttcggaattttcctaaatttttgCATGGGATATAAGCATCC TGAGCATTTTTCAGGTTTGTCAAGCCCTTAATCTAATAAGCATCTCCAag cttgttttcaaatttttgcatgcttatataaaaaacacaTGTACCATTCC TGTCTGTATAATAAGAAAGATTCACATATATGGCACAACAGGACCAGTAA AACTCACTATCCACGATTTGGCCACTGGCAATGTAAAACTACACATTATC ATGTTTTCCGATGTTGGACATTATCAGTGTCGTGCATTGTTTCCagattt ttttatcatcctTTTTCTTTTAGGAATCGAAGAGACCGACCATCGAAGAT ATTTTGAATTGTCAAGGCATTCGTAATTATTTGGAACCTCCAGTTGAAAA TGACAAACGAACTTCCATGCCAACATTGGAGTAAGCTATTTACGTTTTTT ATCGTCTTAGCGTCAACCTTCAGATCCTTTACTCATACTCCGTTGGAATT GGTGCTGTAAAAATTTCCACAATTTCTCACATTGCAAATCAAATGAGAAC ATGAAATCTTAGATTAATTTAGTGACGATTATCGTTTATTCAGTTTACAA ATTTTTGGGGAATTAATGAAGCATTAAATTCTTTTAGTGACTTGGATAAT gacagtttgaaaaagaaagaggaACAGCTTCGAAAGTGGAGTCTTGATTt ggaaatcaaagaaaaacagttaaaacgTAAGAACATTCATTCAATATTTG TTTAGCGAAACATTTTTGATGCCATCTCTACCTTACATACTAATACCTAG ATAAATGGAAATACTGGAGGTTTTATATTATGGCCCTCTTTTCACTCTAT CAAATTATAACTAGCGTTTCGAGAGAAATGCGTACAGTCTATTGATGTTA GTGTATCTAATcaatgttgttttttgttttattttagaaaaGGAAAAAGA CTTGGTTGAAAGAGAAAGGATACTTGACAACAGACTTCGGTAAGATTTAT TCCTTtgctattttgatttttgaaagcaCTCAGCACCCCATTACTATTCT CAATTAAGAGGGAGATGAAGAAAACAATCGTTTTCCAGAGTTATTTCCTC GTGATATTTCGGATTCTAAACAAGAAAACGGGTGTTAGCGACGTAATCCT TCCTATAATAAATATGATAGCTACTCAAGTCCTAGTTGTCAAAGTGCTGG CCTTCCTGGATGTCTTGTCGTTTTTGTTCAGAATTTAGAGTTGGGGCGAG AAAGAGTGATAACTTATTGACAATTTCCGCATTTTCACTTATTTTTCGAC ATTTCGATTAGGAGTTTATTTAGTTATGAGCTTTTGGATTCTGATCCGAA GGTCATTCTCGATGTAAGTTAAAGTACTTCAAAATCATTTGAAGGAATGC CTCATCAACGATTGTCAATTGCCAGTGGCTGATTTTATTCCTAATGAATT TGTTTTCATTATAGCTCCGACAATTTATACCCTGCTCACAAAAGATTAGC GATGCCTGACAAAGAGAACATATTCAACAAGAACGAAGATCAAAGGCTAG TTGAAATGGATTGGAAAACAGGCTACCACCGTAATAAAGATTACGAGATG AAAACAGACTTTCGACCTCACGTAGGTGGCGGTGGGGGCATCGGAGATGT TTATGCAGCTGAAATCAACAAGCACAATCGTGCCTTACGACAATTGGATC ACAATTTTGACGTTAATAGATATGAAACTAGACTTGCACGACCCTTCCCG TACGGTCTCAGGTAGTTTGTAACATCTAACTACATATAACTTTTATGATA GTTCCAATCCAATCAAAGGTGCTTCTTTAGATGTCTTCTTTTGTTTCGCA GTTTAGAAATTGATGCTTTATTCACGCATACATGATTTCGTCCATTCCAT GCGTCAGCCACTATGATTTTATTTTACTTACTTATTTACGTTCTTGTGAa ctcgaaaaaatattttacgttTCTTTGACCTCCTAGTAAGCTTCATGAAA TATGCACGACTTATCGTGGTtcgattttcattgaatttttttatcactcg caaacaaaacttttaagatATTCTTCTTGCGTTAACCTGGATTTACTGCA AAaggatttattttgtttttacgtTTCGTGCGTTTAGCCTTGCTATTTCT TATGTTAGCTTATCTTgattttatgtttatttatattttacgtTTGTTTT TAGGCTTATACATACACCCTGACCAATTTTAACCCTCCTCCTTTTATCTT ACTCTTGGCGTCCCCAGCTTCCCTTGCCGTACCCATACTCCTAATGTTTC TGACTTTATTTTTGACGTAGTTTTGGTTTTTATTCTGAATTTACACCTCA AAATCAGAGGTCCGTCCAAATGTTGTCTTCAAATTTAAGTTTCCTTGTGA aaagttttatctttttttgaaaaagagaaataaaTATTATGTAAATATTG AACTGTATAATAGTAttattgaaaatatgttttgataAAGATGTATGTAA TTGTCTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069191TCONS_00069191Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069191-proteinTCONS_00069191-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:571096..580453 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NEK2serine/threonine-protein kinase Nek2 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.63 22.28 38.56 41.47 39.49 31.25 13.86 14.84 6.87 10.6 8.09 5.17 3.82 3.99 4.19 6.99 10.95 7.99 1.72 1.78 5.06 4.78 14.77 13.56 49.61 38.39 2 1.25 9.3 10.2