XLOC_043253 (gene) - C. hemisphaerica

Overview
NameXLOC_043253
Unique NameXLOC_043253
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_499:4934..11665+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043253 ID=XLOC_043253|Name=XLOC_043253|organism=Clytia hemisphaerica|type=gene|length=6732bp|location=Sequence derived from alignment at scaffold_499:4934..11665+ (Clytia hemisphaerica)
tttttttcaaccagTCTTTCATTTTCATATGGAAGAGAATTTGCAGAAAC ACTTTTGGACAAGGAAGGTCAAGATGGCGACGAAAATTTATCTGTACGGA TTTGAACATCTACCTAATTTCACAATCCTCTTGCTTCGTATGCATAAATA CATTGGTGATTGAAGTTGAAACATTTGGAACATTCAATTTTGTCAACTGG CGTTTACTTGACTTGTCAGATGAATAGGATTCTTGAAGATTTGCAATTAA AGGCAAAAGACAGCTAGAACATCATCAGGTAAAGGCACATATTTTTTAGT TGGTTTGTATTTTACGCTCCTATTAAGTCGATTTAGTCCTCAAAACTTAT GGTAACTTTTGTGTCTCTTGTGTTTTTTGATAGTTGACTTTCAAGCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNacatcaatcgaacttcatcgaacaaagaaaactcatc aaactaaatcgaacttatcaagaaattttcgtaaagttcgatagctgttc aatcgggttcggtaatcgaacagctatcgttcgattttgttcgataacga aaatcggtttgatagggttcggttgacaccgcctggtCCGATACATTCAA TTATACAAACCAGACCAATGATAGAGATgacactttttttaaagaaagta ataaaaattttaatctttttttttacaaattaacaaCCTAAGAGCTTGAT aaagctccagcttgtcccatccgaTGGGATAGATATAGGATGGCCCGTGG GCAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCCCCCCGCCCGCCAATA CACCCTCGgaatatgaataaaaaattttgtctttgtcgatCTTGATCGAA CCTATCGTATTCATCAAATTGCGATCGaactttaaaaaagttttcctgGT TCAATTGGGTTCGGTactcgaacagctatcgttcaaTAAGTTCGACAACA AGAAATGCTTGACAAATcgacaaaaaaaactttgttaCATAAtaccaggc ggtgtcaatcaaaataatcgaacacaatcgaacacctatcgaaccggaaa tttttcataaagttCGATGACTGTTTGATTATACTAACATACATAGTTTG ATAAAGTTCGATCGCAGTTCGATGAATCCAATtgaggttcgatcagttcg attagtttgatttatacTTGCCgcctaattttttatttacatcTTGGTGG CCGCCCACGGGCCATCTAATATCTATCCCATCGgacgggacaagctggag cttttacaagctcttttacGATTTGAAACTCATCGACCATCAATTGAACC ctatcgaacatcaatcgaacttatcaagaaattttcgtaaagtttGATGG CTGTTCGATCAGGTACGGTAATCGAACTGTACTTTGAAttgaactttgtc gaacttaatcaaactttgttgtCCAAATTAATGGAACAGAGAATCTTTTG CTgaatttgtcaaacatttcttgTTGACAAACTTTATCAAACAggttttt ttgttgaatatgTTTAAGGTTTTGATAAACGTAACGTTATGTTGAATCTA GACATAATTAATGGAATAGTTTGATTACCAAACCTTGTCAAACTTAatta aacaacaaaaaatcacaaactttttaaaagtggcaaaaattgtGAGTAAT TAGTTGTTCAATAGAACAATATGATataatcaaattttttatcgTTTCAT TAACAGGACTCTACAAAGTGATGTTTACTGAACAGAAATTTGGATGATCT TGCAAAGAGAAGAACAAACCTCCATCATTGAACAAATAACGTAAAGGTAA GAACACATACTTCAAAATTAAACAATCAGGCTTTGCCTCAAATGATACAG CCTGGGAACTCAAGTAagggaaagtcaaaaacttacaaattatttttata aattgaGGTTTGTAATAACAACATTATGAATTGCTACATTTGAAATGATG CagtaaaaattgtgaaaaatctaTAGGAATAGTAGTATGGAACTTACTAA GATTTGTATAAAAATCatgaaagtaagaaaaataaaaaacctcTATGAAA GACAATATAACTATACAGTCCTTTGTGAAATATAAATATGAAAGGACCAG TAAATTAAAATAGATTATTTAAAAAAGGTTGAGTGAATCAGAGtgaataa aaaatgataaatactaATAGgactaaaatgaaattttatggtctctttta agATTATAGACCAAACTTACTGCTGTAATTCAGACTATTTGTTCATACAC TATTGATATTAAACCACCTATATAATCctggtaaaaacagtaggaaaGTG CTTATTTTGTTAACAACTACTcttgggtgcctaataaacgtacatgtacg ttgaAAAATTGGTAGATTTTTCCCTGTACGTTTTTtttagcctgtacgtt tatttattttagctttGATTTCTcgtctgtacgtttattttagcctgtac gtttattattttcaattttatttccctcctgtacgtttattttggtctgt acgtttatttcagcatgtacgtttattattttcaattttatttccctcct gtacgtttattttggtctgtatgtttattaggcacccaagAGTAATCATA TTATTAAGAATATTGACATGATACATTTTGGATGAAAAAGAGCTTACTtt taaatgaattaaaaaatatttgccaGTCCTATTTAAGATTTAGATTAAAC TTTTCTTCTAGCTTTAGATTAAACTTGTCTTCTAGCTTTTTgatcagtga caaaatattgCGCACCACCAAGTAGTCTTTATCATCTGTTGGTCTTAACA AGTAAGTGCTATCAGATTTGATAGTATCCATCTCCATGGTTCTGAGTTTT TCTTTAGAATCATCCCAAAGAAGAGTCAATTTGATCTGGATTTGAGCTAC TAAGTCTTTCAAGTCCTCTTTGTTACCTTTCAACTTGCAAGCCTCATATT GATTTGCTAGAGTATCATTTCCAAAGAGTGATGTCAAAATGgtctttgtt gttattttctgtcTTCGCAATTGTAACACTTCCCTTTTTTTGTTTCTGCT GCCTGTGAAAAAAGAGGAACCAGTATAAACATCTGAAATCTTATAcatct tttttttcaagaacattcaaaatctaGCCAAATATAAATTAGAACAACAA CTAGTACATAGATTGTACTTACTACTCTCACTATCTCCGAACAAAgattt tgatggttttggtacTTGAGGTGTAGCTATAAGcataaaaaacaaacttc aataATTAGACAAAGTTATGAATGATATCAAATATTATCTCAAATTATAA ACTTATTACTCACATGTAGTCATGATGGGCTTTGACGAAGGCGTTTTTGG TATGTCATTGACTTTGGAATATGGTGCtattaaaaaataatgattaTAAT TATTATGAATCGATTATAAGAGATAATAGAAGAGCCCTTTTGAGTTTCAA CCTATATTGATTATCTTTATTGGCTTACCTGGCATCAAAGGACTCTGGAT ATTAAGACCATTGAATAGAGTAGAAGGTGTTTTGTCCAAAATTGATGTAT CCACTGACTTGTATTCTAAATAGTTATCATAAAAAGCAATATTCTCAATA TTCAAGCTTTACAGCCCTATTAAGATTTTACAACAGTAAACTTTATTTTG TGTGTGTTGTGTGTTGTTTGATCTGATccaaaaaaactctttttaaatAG AATAATGATGTGAAATATTATGAAATTAATTCTTACCAAAAAGTGAAGTG TTGAAATTCATGAGTTcgttttctccttgcattgcttcCTCGACATTGTT TGTTGTgcctgaaaaattcaaaaaagcttttaaattccttgaaagtttga agaacGTGGGACAGATTTTATTATGTCAGATTATGTCCATTTTTTGGCTG ATATCAGCAGAATTGTTTTTAGTCAGTCTCACCGTCATCATCAGCAATCA TTGTTATATCAGAATTGTTGTGTTCAATTTTGTCAAATCTATCCTCTCTG TCTTCATGTTCCTTGGCAATTTCTTCGTCACTTTCTTCATCACACTCTTC TTCATCACTTTCTTCAGAACACTCTTCTTCGTCACTTTCTTCAGAACTGT CTTCTTCATCACTTTCTTCAGAACTGTCTTCTTCACCACTCTCTTCAGAA CTGTCTTCTTCGCCTTCTTTTGAACTGTCTCTGTTGATTTTAACTGGTTC TATCTCTGGTTCTATGGATTAAGAAACTATCATTCAACATTCAACACCTG ACATTGGAAAGGTTTGTCTTTCAAGGTACCctcaaggaaaatattttcat aaagaaAGTAAAGTGGAACATAAAGAAAGATATTAAAATTAGGCATAAAA ATTACCATCAAACACAATTGTCACTTTCCGCAATCTTGAAATTGACCCAA TGTTGTATAATTTCCCTTCATCATTCATTACTTTATCTGCTGGTACCATG TCGGGTTTCTCTTTAAGTAAATCATTCCATTTATCTGAAGAAAAATTAAA CAGATTAGTGCCAACAGTCCTGTAAAATAAAGGCTGTTTCAgatgaagaa atatttttcgttgGTAAAAGAATTTTAAGTAGATTGAGGAAATTCCTGGC TGGGGCTAAACTTTTCATTAGGCTAATTTTCTTTTGTCcaggggtcggta ctaaaatctcggacaaataaatatatagaaattGTCAAAAACAATGGTTT TTATTTCGTATAAGTAGAAGTGAGATATTAGTAGTACTTGCCTTGTAATT TGGTAACTTCATTTTTTNAGTAGAAGTGAAGTATTAGTAGTACTTGCCTT GTAATTTGGTAACTTTATTTTTAATCGTCGATGACCTGAAGTGAGCTAGC GGGAGGCTCAAAGGCTTAAGGTCGTGTAAGGTAATTCCATCATTGGTTTC CGTCCATATTTCTTTAACCTCCAAGAAATCAGCGATCCTTTGTAGATGAC CCTGCCAAGTTCTTGGGTGCTTTTTAATGAATGAAAAAGGAACCAGAGTA GAGGGTAGTGGGTCCAATTGATCGCCTGATTTTGAACATgctgattttga tttctttcttctttttaccAGGTTTTTTTGATCTGCATAATCATCACGGA CTTGCATCCTGACGAAGGCGTTATCCAAGACATTCTCTGGATGGTGGTTT GATGTCCAAGTTGCTGCatgcttcaaaaatttgaacattTGTTCTTCCTC TTCAACATTTGCTGATGGTAAACTCATTATTCGAAACTGATGGCAGCCCT CGATGAGTTCGTGCATGTACTGGCCGTGAAATTTTCTTGTCGTTCGTTTT TTGATCGTATCGAATGCCTCTTTGATGTAAATGATGTGCATGAAGACGAG GTTGTACAAACGAAAAATCAACTGAGGTGATCGCTCTCTGGAATACATGA TATCCTGGATCTCACAAAGGCTtctcaagattttgaaaaagcaGTCTTCG ATCTTACCGTTCTTTAGTGTAATCGTGAGCTCATTGAGAGCATTACGGTA ATCTCGAGCTCGCTTCAGTTGAGACCCTCTCCAAATAGCTGTCAACGTGT TGTCAAAGGTGCGTTTTTTCCTCTTATTCAAATGCCTTGGAATTTGGTCC AACAAGTTTTCCGTGTGACCTTTGAGAGCATGCATAGGATCCAGAGGTAG AACTTCATAATTGTATAAACCTGCCTCGGTCATCGACTTATGATTGGACC CGGCCAACAGTGCAGGGACTCTTTGTGTGCCTTTCATCTCCTCAgcaaga atttttctcaaatgttCAACCTTGTTTTGTGAAACAAACTCGACCTTCCT CTGATTAAGATCTgatattattttatctttttgcAGGTGGTCAGCATAAT GAGCAGCGCCTTCTCTTTGAAGTTCCCGACCAACAGTCGTTGCAAACAAC TCTCTGCATTTGTCATCCAGTGATGTGGTTTTACTATACAGCACATGTTG TAAATCATCTCCTCTGTTACCATCCAATTGGCAAAACCAGCAAAAGAATC GTCCTCCCTTTTGGTGACCTGCCTCTAGCTGGCAAGCTGGGGCATCGCCT AGTGAAAGATTTTATTGTACTTATTTATGTATTACTTGTGaccatttcaa ataaaaaataacttagaaaaatgttcttcaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069400TCONS_00069400Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_499supercontigscaffold_499:4934..11665 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86 0.85 0.16 0.04 3.46 2.67 4.91 5.14 4.46 5.45 3.43 5.04 6.55 7.13 7.66 10.12 8.32 8.73 11.68 11.27 11.69 11.66 5.67 7.29 1.71 0.96 13.34 7.9 7.48 6.69