XLOC_043333 (gene) - C. hemisphaerica

Overview
NameXLOC_043333
Unique NameXLOC_043333
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_502:40105..51089+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043333 ID=XLOC_043333|Name=XLOC_043333|organism=Clytia hemisphaerica|type=gene|length=10985bp|location=Sequence derived from alignment at scaffold_502:40105..51089+ (Clytia hemisphaerica)
TTTAGAAGAAACActaaaaaacaacacaaaataaCAATGTAACATTTTTT AAGTGGCATCAACCAAAATGCGTAAACATAACAAAATCACTTGGAAATCC GTGGGAAAGATCTACTAATGtcgtgaaaaataaataaacaacgcATAAAC AAACAATGGCGCAACCCACTGATGCTTTTGATGAACTCTCAAGTCGAATC AGTGAAAGAAAACGTTCAGATTCAGGCATACACAACATTGAAGACCTCAA TGTTGAAGAGAGTAGAGCGGAGCATCACTTCACAAGACGCCATAGTGCAG ACGAGTTAGGGGACTCGGGACGAGAAAGTGCGGACCAAATGGACACGTCA ACTAATTCTAActccaaatcaaagaaaaagaaagctggGAATTTCTTCAA AGgattcaagaacatttttaggaagAAATCGAAAAGAAAGAGTCAGGATG GTGAGGGGTCACTCCAAGAGCAATACAAATCACGATCGCAAGACGATATC ATGGTCGGTGGGGGTTCCGGAGGGAATACTAGAAATGACGATCATTTGAG GAGATTGAATTCTGATGGTTCTTCGTTGACATCCAAACGATCGAAATCAC CCATCAACCAAGATGATGATAATGTAAGAAAAAGCTTTTGTATGTCCTGT GATATGGGGTGCGTCTATTGAGTTCTTCCCTTATTGGATTTCTTGTACAT TTTCTATAGAGTTTCAACTGTCCTGCATGGAAATCTTTGTGGTTTTTCAC CATTATCATGGTTCAGTTCAATTCAAACGTAATCATCTTTCCATTCTTAT TATGTTGTCTATACACTTATCTGGCAACCCAGTCCACTCGGTAGACCCGG TCTTCACTATCACCAACTTAGTAAAGCTCCCCTCCCAAAGTTTAATTGTA CTTGATGTGATGTTTTATTTATCATTCTATCTTCTTTTTCTGTAGAACTC TGAAAAGAAGAACTCCTTGAAAGACGCTCAACAGTATATTCGAAGTTCAC TCAGGAAGCTGAAAAGCAAGAAAGGAGATAAAAATGATTTGGATACAACA GTAGAATCAATGGATTCTGAACCCAAGCTTGATACTTCGAGTCGTGCGAG ATCCACTTCTTCGTTGGGGAACAGCAGTTTCAACGACGATTTTTTCTCCA AGACTTTGGCAGAAGAAAGCACTGACCAGTTCGGCAATCACTCTTCCGGT AAGAACCTTTCCTTAAAATCTCTATCAATATTAACGTTCAAAGCCTGGTA TGAGACCAATTTTCTTAAAAGCCCAATGTACTTTTAAACTAGATACAATT TCGCaggaattaaatttggcggattcgcGGATTTGGATGTCAAAGCATAA AATTAAGTCCCTGTGGAATATTAAAACATTACAGATGAGCTCAGCCGCGA AATTTCACCCCGTTAAATTAGTTTTGTTGAGTGTTCTGCGTGCTAAGCTC TTATTAAATTCAGATGAATATTTGCCGCAAATCATCTTTACTCGCCATCA TAAACAAACGTTTCCACGGATTGAagtaacacccccttctcacgggatga gctggagtttttataagatacttcactaattggtcaattgaagtaataga gatgacgcgttctttagaaaaagtaatgaaattaacttaacgaccaacca aatcacacagagcttgtaaaaactccagcttgtccccttctcacagaccc agtataattttttcagccagtgggggtaaaaataacggactgaaactcga taggGATCGATATTCCCTTATTTTTTATGACCAGGGATTTAaactctttt gttttcaagtcagaaaattcagtggagatgataaaaataacataatattt tgccgtgaggattggtttatttgattattttcagtcgGGACGTAAATTgg ggtataattttccactgggacgatattttggccaatttttccagggggaa gggttcccagtggctCTGTAAGAAGGGGCTATGGCTTAATTGTGTGTGAA GACACTTGTTTCAATTATATAGGTTCTTTTTCAGTGTCTCTTTATCAGAA TATACAATCTCGCCCAATCAAACAATCCATTAGCGATATTCTCAAAGCAA TTAAGGAAATTGATTGGCTTCTCATGATTgcaattaggaaagttttgaaa tatacattattcattgaaattaGCGAAGCTGTggtttttgttttgtattt ctgctgagaaaataaaatgtttactTGACTACCAGAAGTTATCATCAGCT TGTTGATGGTATACTGTACATTATCTGTCTATATCCTGTCTTTACCATTT AATTGAAATTTCAGAACTCATAAGCTTGTATTGGCTTGGGTTGAGTCAAT AGTGCTGTTTGACGATAATATTTAGGGCTTCAAAAGTTTGATAACGTTTG GTTGAGATCGGTTTTTTATgtgtttttcagccatttaCTGAACCATAGGT TTGATTCTTGCGTCAGTTGTTTGTtggcgtagtggtatagtggttatcat ccttgactcccGCCTGGGAGGCTTGAGTTCGATACTCATCGtgtctctac gattcacttggcaagtgaatataccttcgcccgggtcaacccatgccatg tgaggggaattgggtaccattactctaatacaagagtgtgggtagattag acagacattgtgacgtgccgtcgcactcataaggttcggcctcgcgtgag catcgctctcccagtgtcgtttgagtgtcatggtatacgccatggcttag tagctcgcgtctgtcaaatcgcagtgtctgtcagcgccgtgattcctact cattcttgggtaggacccatcccgaatgcattcggagggctcatatcata tATCATACCTATCTTGAGTGAATTATTGCCTATTCCAGGGGAATATTACT CATTTgagagttttttttctttatgcGAAAAATGAACCTAATTACAGTCA TTCTCCTATTGGAAGTTACCAACTACTTGTTTCCATTCATGTTAAGTGCT GTATGTAGGTTGACTTGTGAAAGAATAATTTGCAAGAATGAAGGCTTCAC TTCGAATTTTTCTATTTAAATATCAGTAAGGTATTTCATAAATCTGTTAT TTACAATCAGAATGCCTCACCACTTCCCGTTGATCTGTGTCACCAATACG GGAAACCAATATAACGGAAATGACAATAGATCAAGATGTTTATTTTGGAT AAGGATATCATATTGTTAGTAACACAGAAGCAAAGGAAATGGTCATAAAA AGTCGGACGACCCCATAAATGGATATGAAGTTTTTGTATGAGAATTTGTG TATTTGACAGAGAAATGACAGTTGCGTGACCGATACAGTGACGTTTTTTG TGAATGATGATGTGCTTTATAGCAGTTTGAATATTGGGATCTTTTCGCAT ACAGTTTACATAGTAATAGTAGGGTTGATGGTTCACGATACTATCATTAT CGAGCCCTCAATTTTCTATGAGTTTCCATCTTAATCTTATCTGGCTTCCC TCAGAAagattccttttgatttttcactgCAATTGTCCAATGTCCTACAT TTGTTTACTTTAGTtagttttttgattaaaaaggtTTGGGCTGTTCTTTT GTCAAGGTTTAGTCATTTTTATCGGATCTGGGTTGAATTGCGTAATTATT GACCATTCTACTTCCAGCTATACAGACCTCAACTGTTCAAATGAGGGATA GTAAACTGTTCATTTGGTTACCTATAGTAATCAATCAAAAGAAACGGTTC CATCATGAATTATCAAACTCTTTGCACAGTATTTATCCATTGGGATGTTT TGTGGGAAAGAAATTTTCCCCAATACATATGATTGATTATAAACAAACGC GATATGATGAATGATTATCATAATTTGTTGTCTTATTTCGTTAGTATAGT GTTGTTTTACCCTTTTCAAATGTCTTAGCACTGGTGTTAcacattttttc attatttttccgTTTAGCTAGCATGGAATTCTTAAACTGTTTCTTGTTTG ATCTACAAGTTTCTGTGAAATGAATTTCTATCTTGTTTTAATTCTGGTCT gacttttcaaagattttttcaatttaatcaAAGGACTTTATCAATGTTTG ACTAGAAAACTCCAAGAAGCCTCAACTAATATTCAGATTACGCGTTTGTT GGACCTTCTATAGCATAGAACCTTGTTGCTTTGTGTTAACTTCAATGGAG ACGAAAGACAAAGCACTCCTTGTCGAGATGTTTTCATTCCATCCTCGTAG GCACATATTACTACGTGATCTGGCCTACGTTTATGTCAGCTTTCGTGTGC TTTAATGTTCTGACGTCATGGGTTGATGTAGAGATGAGCTCAATTTTATG AAAAACCCTTTATCTGCATGttacaaagtttttcaaatcgGTGAATGACT GTTAGTGATTGTTTATGACGTTTTCAGTCTATAAGCTTCTTTTAAagtgt ttttggtttttgcttTAAATTCGACTTCAGATAGCTCTCATAAACGCATG TCTTCAAGTGAAGGTGTTGTTGTTTAGAGAAGTTATGGAAatgtttgttg aaaatttgtatGCTATAGTTTGTTCATTACTATGGCTCCTTGAAGTACAT AGCTAGCTCATAAGTCGTCTCGAAGAGCTGTTAGATGGTGATCCAATATA TTTGAtcatttctctctttttatgTAATCTTGTGGTAGATTACTTTTTcg aataagaaagaaaaacttaGGTATTTGATACCTTTATAACATAACTTTCT GGATTATTCAAGCAGGCCTAAGAACTGTTTACCTCGTTATTTGTTTTGGT ACAACAACAAACTTACAAAAATCCTAATCCATGTCTGACTAAAGTGTTTT CTACCGGTCCGTTGAAATTAAATGTCGAATATTGAAACGATTTAAGGtcg ttttattaaaatttcttataaaaaatcctGTATTTTGATATAGGCTATCG GATTGACTTTGTATGTTGAATTGATTTGACATTATACATACACTAGAAAG TCACTGAGCTTTTGTTCATAgtgtttttcaaattaaaatgaTATGTTTAA GCTTGTTTTATTGTCATTGCTACTTCTGAGTGTCAGCATTTTATGCTTTG AGCAATCAAGAATGGGACAGTTGACCAACTCTGTTTCATCTTGTCATGTT GTTTTTGGCTTATATGATTACTATTTTATGTTTGGGTGTTTGCAGAGATT TTGATGTATTTGATTATGACCAAAAAGCAATTCTCTTTAACTTGAAAAGG AATGAAATTTAGTTCTGTCAACCTCTTGATATGAGATTTCCAAATGGTTA TTCTTGTTGAAAGGCGGCTAACTTGGATTTTGAAACCTTTGTGAAGACCT AAAAAGGGGACACCAAAGTAATAAAAAGGGTTTTTTACCGGACTCTTCCT CATTCGAACTACTATATTTTTCGAATCCTTCTATAACTCTATTTCTCGTA TCTGATTTTAGAATACTATCGTTTTGAGTTTTtggtttgaaaataaaagt aaattctGTTATTTGGATGCTTATCAATGGAACTACTTATAGATACTTTA CGTAACGAATTATATCAGATTATATCATCCAGTTCTTTCTTACATCATAA TGTGTCTTTTTTGACTTTATGTTACGATGATGTTAACTTTCAAAGGTAAT GGGAGATTTCAAGGTTCAAAGTTAATCAAAGCTCCTCAGGTTGTCTGAGA TCTTATTGCAGTGTTTTTTTAACGGgagacgtcttttggacgttccGGAA ACGTCATGTGATGCATGTTTATGCTTGCTATAATACAATGTCTAACAGTT TGTTTTCATTTCTAGATTTAttgcaaaatataattttcataagaaataaa taaagagAAGGAAACAACACTAAATTTGTCGTTATCAAATGTAAAAGTAT CCTAAATTTTATGTGCGATACCGTATATTGGAAGGGGTTTTAGGCTCAAA ATCGAGTTTTGATCAAAATGGTTGTGATTTGTCTTCACACAAATAAcgat aataacaataatatagAGGAGGAAAAATTCAACTTTAAAGACGCTTTCAG CAAATTCAATAATGTCAATGCTAATAATAATTTGCACACTCCTAAGAGTT ACAATGCAGCCAAAAATTTCAGTCCAGTCAAAAGTTTAACAACTGCCACA AGTGGCAATGCTGCGAACATTCGAAAAGACTTGGAATTTCTACATAAGAA GAAAGTTACATTGGACAAGCCAACTCACGATAAACCGATAActgtttctt cttcttcacaAGCGACATCGACGTATTCGCGTAATGCTTGAAAgctcttt tttcatttgttgtCTACAAAATTGGTTCCTTTTTATTTCTTGCTTCTCCA GACGGTCAGGAGAAGCCCGAGCATTTACTGCATTATTCaataaaaattac atttttcttttcgctttaggtttaagggctctgaccatagttaatttttc ataattgccgtgtttaaaatgtgttttctgactgatgtaaccaacaaaac tatggcatgttatacattttctgttagacNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ngcaacatattattaacgtctttttaaagttcataacgtcatttctgcaa ttaaattcttaattactctgaagggatttgattaaaaagcaatttataaa gataattctttgttgaaagtgttaaagaacctaaaacataacttttatgt tcaaatactaaaatcaattttctgactatggtcagagcccttaatttcaT TTCAGAACTATTTTTTTATATCCGTCTTTTACATTTTCAGCTCCCGTCAA ACTAGGAGACATCAAGCCGACAACCCCACAAATTGAAAATACCGTTGCTA AGGACCGTATCCGTGTCGCGCCACAAAACCGTCGGAAACCATCCCGATAT CGCACCGGAAACGCTCCACCGAAACCCGCTCGCTCCACGAGTTCGTTTTC CTTTAAGGAAGACTCGTTTTTAACGAAAATCGATGAAGATTCCGATAATT TCGAAAGTCGTCAAACTACGAATGTCAGCCGACATACATCAAACGTCAGC CGGAACTCTGACTGGGATTCAATGCCCTCCTATTCACGAAGTAACTCGGA AATGACAAATCGATCTTCGTTTGATAATACTGAACCGAATTTCAACGATG CTGTCCCCAAAGCATTACGAAATAAACATTCGTTCTCGACAGCCGACGAT TTTCAACCTCAAAAGCAGAGAACCATGGCCCAGCGATCTTTTTCGACCAA TTCTCGAGAGAATGTCAACCGCCCTAAACCACCTATTAAACCGCCCCGAA GCGCCAATTCATCCATACAAAGCTTAGACGACAATGAAGATCTTCCGGTG AAGAAATTCTCGTTGGGTGAATtgaaaagtaaattattttattCCGAATC TTTCGGAAAGAACGACGACGAGAAACGACTCTCAAGAGATCAAGTTTTCG GTAGTCGGGCTTCAATTGATGAGAAGGAGAAATCAGCTCCCGAAAAACGA CAATCTTACGGTTATGAAAGAGAATCACCCGGTGACAATCAAACCTCATC CCCCGAAAAGCGACAATCTTTCGGAGATAAGCGAGAATCGTTCGGAGAGA AACGACAATCATTTGGAGAGAAACGACAATCTTTCGGAGAGAAACGATTA TCTTCGGTCGATACAACACCTGTCGAAGAAAAACGCCTTTCAAAAGTTTC GTACGGAAGCCGAAACTCCTTGACgggaaaatcttttgaaattgatgaaa aacgaAACTCAGGCTCGGTGACAATACAGTCTTATTCTGTTCCTGGTTTA TCTCGAAGTCGCACTTCTTTGAACAGGGAGTCACCAGAAAAGAAGCCATC GCCTGAAACCACTACAATAAAAAACCAAGAGGGTTTTTATCGAAGCAAAG AAGATATTTCACAGCAGCGTAAAAGTGTTCATGAAGAGAAAGAACTTGTT TTCCCCAAATCCCAAGAGGGAGATTCTTATGGTATGTTGGCAATGGCGTT GACCAGCCCACGACAAGATCGAAAGATCGAATCCAGCCCTCCCTTATCGA ACATCTCTCGATCAAAATCTTATTCTGAGAAACTAGAAAACCGAGAGAAT AGTTCATATTCTAGTACTAATTCAAAGAGTGTTGGCTATATTAACCAAAC AGGCGCTAAATCACCACCGGTCGTTCGTCAGAGGCCAGCTACAAGTCCTC GGAAGCTTCACCGTCCAGATAAAGAGGAAGAGGAAAAACCGTTTGAGTTC AAGCGTATTTCGTTGAAAAGTGTTCCAAAAGCTGAGGACTATATGGACAG CAAGGAAAGTGTCGAGAAGGCGAACGAATCTCATAACACTGCAACGACCT CATCGAACgatattttagattttgttaATAGTGAAATGAACCTTGACGAA CCCGTTACCAATCAACCGAAATCGTTCTCTCGTACACCGAACGCGAGTAC GTCCTCTTATCAAAAGGTTTCGAGCCCCGTCCGTAAGTCTGAAGACATTG AAACAAACTGTATGGCGTTTGACAGCGCCAAATTATCGAGCATCGATTTG AATACGAGTTCCTTTAACGAGAAATCTTTCGAAGAAAAGCCACGACACGA CGTAAAACGAGCTTCTTGGAAAACTATCGATGAAAAACCGAAAGTTGTCG AAAGTCTTGAATTCAAACggcattctttaaagaaaatcgaCCGAAATTCC TTCGAACAACACGCCCCTGTTGAAGACTCTGCCGGATCACCCttagaaat gaaaagacattcgTTAAAGAAAGTTGATCCACCCTCTTTAGCAGGGGAAG CCAAATCGTTTTCTCTACCTTCAAATCGAGACGTCAAACCAGAAGTGGAA GAACAGATGGACCGCCCGCCCCGCCCATTAGCTAAAAACCGCCCTACAGT TCATGGGTCACCAAGTAAAGACTTTTCGTTTCAAAGTAGTGATGTTATTC AGCGTTCGAAATCGTTGGGAAGTAAAGAACAGAAGAGGTTGGGAGACGCC GCTTCTTCGAAAGAAAACCTCGCATCATCTCCTAGCAACGCTGAACCTGA ATGGTTCCGATTGGCTCGACAAAAACAAGAGAccgacaaagacaaaaaca ATGGTTCGACGAATGAGGTAAGAAAAATTTCTCAGTTCTTCTTTCGTATG GGGTATACTTTTGGTGCttgttgaaatctttttagCCGCTCTAATCTAaa ataagcaaagaaaaatggGGGACATTCCGTCCAAACTAATCGGATACTTG TTTTCACTTGCATCACCTGCGAATCTAGGTAAAGCTGTAAAAGAAAGAGG TTTTAGTTTTCTATACAAGTCTAATGACCAAAAAAGCTCAAAACATCATT TGAAATTAATTCCGATTCCCGATCTCTTCTTTTTCAGGCAAACAGCAGAC CTTTATCACCACCGACcaaaccaaaaccaaaaatcAGTCCACGTCCACCC ATTGGTCAAAAGCCAGAAGTCAGTCCCAGACCTCCGATCGTTGCTAAGAA ACCGGTACAAACAACAGTTTCACCGACTCGTTCCGGTTCTCGTGTACAGA GAAATGTTGAAACTACAACGTCGAACTCTTCAGAACCCGAGTGGTTCAAA TTAGCGcgcaaaaaacagaaaaatgaagaagtcgTATAGTTTTATACAAA TTTAATTAATTAGGATAGAAGACTCTTTTAGATTATACTGTGCGTTCTTT TTTTTAGATTCTAAgataatttttgtataaaattaATGGAATAATCTTTG CTTTTAgggtattttaggctttttaAGGCAGTTTTTACTCACTGTCACTA TTTTACTCATATTTCACTGTTTACGAATCAATCCAATTTAGAAAAtctat ttttggaatttagcgATAGTTCAAGGACCTTGAACGACATATttgcagat gagatggagtttttataagatactttgataattggtcatttgaagtaatg aaaaagaaaatgacgcgttctttaggtaaagtaacaaaattgttttgtta ctggttaacgactaacaaaatcaaataagagcttataaaaaactccatct cgtcccctATTTGATACTTTAAACAGAAACGCAATCAAGATGATCTTTTG AAAGTGGAACTACTTACAAGCAGTTATTATTGTTTTTACGTagttatttt ttattgcaatattaTTTATTAGTTTCGTGTAAAAATAGCATTAATTTTTT GACACTCGGATAACAAAACTCGGTGAAAAATAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069520TCONS_00069520Clytia hemisphaericatranscript
TCONS_00069521TCONS_00069521Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069520-proteinTCONS_00069520-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_502supercontigscaffold_502:40105..51089 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.42 6.34 2.19 1.52 117.49 88.91 61.94 65.58 33.23 45.17 26.36 22.2 31.09 26.75 27.67 35.57 36.68 32.57 27.15 32.87 24.33 25.03 28.79 29.31 35.16 33.06 52.33 41.34 27.02 27.11