XLOC_043363 (gene) - C. hemisphaerica

Overview
NameXLOC_043363
Unique NameXLOC_043363
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_503:238498..249034-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043363 ID=XLOC_043363|Name=XLOC_043363|organism=Clytia hemisphaerica|type=gene|length=10537bp|location=Sequence derived from alignment at scaffold_503:238498..249034- (Clytia hemisphaerica)
GTAAGCTCCCAAAGAGTTGATGAAAGAACGAAGAAAAAAAGGTTTTTGGT TTACAATCATGGTCGAAATATATTAACATTTTAGTGTATTTTAACGTTTT ACAGATTTTAAAGTTCGGGTGAGAATTGCTATTTTAGCAATTCCACTTTC TTTCTATTTCGATTTTAAAGGGGTTCGATGGCTTCTAGGCTATATAACAA TTTTTATTGGGCAAATTTGAGCTTTTAAATCCTGGGATTCGAAGGTCCTA AAGTTTTAAGTTGTAACGGCCACAGGGGACGTTGGGAGGATACGAACAGG TGTGCGATATATTTTCTACTGATTTAATTACTATTCCAAACGCTAAAAGA CAAAAAATACAAACTCTTAGAGTGTGTACAAACGAAAAACTTTATCCTAA AGCGATCTTAACCTAGAGGGCTATAAAAGCAAACACATTGGAAGATAGAT AGGATTTTGTCCGAGTAAGGTCTCGTCTTTCTTCTTTTGAACTTTCGCAT CGTAAAAAGTAGCCTGGATATCCAAGCTCAAAATTTTAGAAAAAATAAGT GTTACCTCAGCCAGACAAAGTTCTAAAATTATAGAGCTTGATTCACCTAG AAATCAGGTGAACACCTGTTGACAGATTTTCCTGCATGAGTCCCATGGCG GCAAATAAATATATGCACATAATGACATGCATAATTTCAAGATGGTACCC CAGCAGTGATAAATCAATTTAGAATGGCAGCANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAAGTAATTGAAAAGAAAACAACCAGAAC ATCTAGAAATTCCCATGTTTTGATCTTCCCACTTCTTCCCTACCATTATT GTTATTTTTATTTGGATGCGTGGTCAAACACCCAAGGGAGATAATTAGAT ATTCCATTGTTATTTGCTTCGAAGATAAAAATCAGGGAGATTTGCAAAGC AGCGTATGCGCCTTGCTGATCGCCCACGCGGTTCACCTAAATATTTAGGT TATCTGATATTCCGATGGCGTATTGGCGGCCGCCCACGCTTAAGCTCTAA AGGAGCAGGCCAATATCTCATCGGAGAGGGATAGTAGTCGTCCATTGATG TGCCGACATAAGTCTAACCCTCATTTTGGGGGCCGTGCTGAACGCTTAAA AATTGATTTTTTGAGATCTGGTGCCTCAAAAAGACCGTCAAATCACAGTC GTTAGTTACCATGTCATGAGTATGTCGGCAAAAATTACAAACAATGATGT AATTTTCAAAAAGTGTGTGCTGTATGGTTGTTTTTGGTTTCTCTTGATGG AGTTTTTGTAGTTTAACTGTACTTATCACTCCCTGAATATTAGTTTTAGT ATCCAGTGTAATTTTTGTATGTGCACCAACCCAAAAAATGTGTTTCTACC ACTTTTGTTTTTGTTTGTTTTGATGGCTGATTTTTTCTGCACTTTCTCAA ATTTTATACCATTCAAAGACCAAAGAAACTAAAGCAGGTATGTTCCTTAT GGGCTTAGGCTTTGAATTTTTTGGTCTTTCTTTGGTCTGAATCTGTTTTG ATTCGGGCGTAGATTGGGGTCAAGAATTTGTTGGATACGATTAAGGATCA TACGGATTAGATTGATTTTCAATTTGTGATTGTATTAAACCGAACTTCAC TCAAGATAACTGCTGCTTTCAATAATAACTTAATGAAATGTCTTAAAAGA AATTGATTGTGTCGTCACAGGTCGTGTTTCGACTACCATGTGAATGTCTT TTCTAAGTAGGAACAAAGAAAGAGGAAAAGTAATCTGGGTGTATGGGATG TTTTAAAGGGAATTCTGATAACATAAAATGTGGTTCTGGCAAAACGATAC AATCTATATGAAAATGGGACTTCCCTTCAAAAGAAAAAGTGATTTCAAAA TGAAGTTTCCGCTGAAATGAAGTTTGGTATGAAAGAGTTTTTTGTACCCT TGCCGTGTAGCCCTCTTCGAAAAAGTAACCGGTTAACAGCAATGTCTCAC AGTGACTGTGGAGAAGATTCCCGGCGGGGATAGAAATTCTATTGTTCTCA GGTCAAAAAGTCCATTAGGAAGGGTTTTTCCATTGAGTTTCAAACGGTGA TGAAGCTTAAGTCGATGTCCCAGTGAAGCTGAAATTATAGACTTTTTTTA CACCGGAGACGAAATTTTTGCTTAATTTTCCAATGGGCTTAGGGTCTCCC ATCAAATCTGTGACACGGTACAAAGAAAAAATCAATAAAATGATAGACAT ATTTGATGTTATGATTCTCTATGGCTGACTCTTTTTTAAAAGCGTCGAGG GCATTTAAAGTTGTGTTTTCAAGGATGTGAATAAAATTATCAGCTTTGAA TTTAATCCAAGATCTCTGGTTATCGTCACGGTTACTTTTCTCTGCGTTGA TTGAGCGTTGAAAAGAATTGCTATTCGCCGTCACAAAATATGATTTCGGC ATGTAACTTTCACGATAGGGGGCAAGCTCGCAATGTATGGGCAGGCGAAA TCGTCGGCCTTTTCAATACACGTCAGATCTGACGGTATTCCAAAAAACAT TAGACGTATTATAGAGTAGTATGGTTGTAACATGATATATAATATACTAT TTAAACATATTACATCAGACGGATCAGTTTTCCCTTTACTTGTTTTTACA AGACATCGGCAGATTGGCCCTGCTGCTGGCTAAGGAAGAAGGGTTAGGTC GAACTATTTTTCTGGTTTCAATGGTTTCATAGGTACTCCAGTGTTTTCAC TTGTTTTTAAGAGATATTGGCCGTTCTAGCTAAACAAGCGGAGCTAGGCC GAACTATTTTTCTGGTTTCAATGGTTTCATAGGTACTCCAGTGTTTTCCC TTGTTTTTACAAGCCACTGCCCATTTTAGCTAAGCAAGTAGAGCTAGGCC AAACTATTTTTCTGGTCTCAATGGTTTCATAGGTACTCCAGTGTTTTCGC TTGTTTTCAAGAGATATAGGCCGTTCTAGCTGAGCAAGTGGAGCAGGCCG AACTATTTTCTGGTTTCAATGGTTTCATATGTACTCCAGTGTTTTCGCTT GTTTTTAAGAGATAGGCCGTTCTAGCTAAGCAAGTGGAGTTAGGCCGTAC TTTTTTTTTGGTTTCAATGGTTTCATATGTACTCCAGTGGTTTCGCTTGT TTTTATTCTAGCTAAGCAAGAAGGGCTAGGCCGAACTATTTTTCTGGTTT CAATGGTTTCATATGTACTCCAGTGTTTTCGCTTGTTTTTAAGAGATAGG CCGTTCTAGCCAAGCAAGTGGAGCTAGGCCGAACTATTTTTCTGGTCCCA ATGGTTTCATAGGTTCTCCAGTGTTTTCGCTTGTTTTCAAGAGATATTGG CCGTTCTAAGCAAGTAGGGCTAGGCCGAACTGTTTTTCTGGTTTCAATGC TTTTATAGGTACTCCAGTGTTTTCGCTTGTTTTCAAGAGATATAGGCCGT TCTAGCTGAGCAAGTGGAGCAGGCCGAACTATTTTCTGGTTTCAATGGTT TCATATGTACTCCAGTGTTTTCGCTTGTTTTTAAGAGATAGGCCGTTCTA GCTAAGCAAGTGGAGCTAGGCCGTACTATTTTTTTTGGTTTCAATGGTTT CATATGTACTCCAGTGGTTTCGCTTGTTTTTATTCTAGCTAAGCAAGAAG GGCTGGGCCGAACTATTTTTCTGGTTTCAATGGTCTCATATGTACTCCAG TGTTTTCCCTTGTTTTTAAGAGATATAGGCCGTTCTAAGCAAGAAGGGCT AGGTCGAACTATTTTTCTGGTTTCAGTGGTTTCATAGGTACTCCAGTGTT TTTACTTGTTTTTGAGAGATATTGGCCGTTCTAGCCAAGCAAGTGGAGCT AGGCTGAACTATTTTTCTGGTCCCAATGGTTTCATAGGTTCTCCAGTGTT TTCGCTTGTTTTCAAGAGATATTGGCCGTTCTAAGCAAGTAGGGCTAGGC CGAACTGTTTTTCTGGCTTCAATGGTTTTATAGGTACTCCAGTGTTTTCC TTTGTTTTTATCGGCATTGTAGGTAACCTGGGTCGGTAAACCTAACATTA CATATCTAGTTACCAGTACTCGTAACACGTGTAACTCTTTGCACTTGTAA CTTTCACTGATATACAGCCAAGTGATAATTTGGCAAATCACTGAGACCAT GTTGACATTTTGATAAAAATATTAACAAAAAGATAAATTATAATACCTAC CAATACAAAAACACAAAAAATATTCATTATACTCAATGTGATCTCAGTAG TGCGAAAGGATATAAAGTTGAATCTGTCAGAAGCTTGTAAGGTCTCTGAG AGTATGTCAGAAGCTTGTATAGTCTCTGAGAGTCTGTCAGAAGCTTGTAA GGTCTCTGAGAGAGTGGTTTCAAGAGAGGAAATTAATCTATTTTTCCATT GTTACTTTAACATGACTTAATGATAGTTATTGACAAAAATATTGACAAAA TCACAAAATATGACGCCTAAAAAGACAATTATAGTAAAAATATTTGGCAT ACCGAATGTGATGCAAGAAGTGTGGCTGGATATAAAATTGCATCAATCAG AAGCTCGTCTGGTCTCAGAAAGGCAGGTTTTAGAAAGACGAGCGTGATCA TTATCCTATCATTATTTTCATGACAAAATGACATAAATTAATCAAAATAT GATATCTTAAGATAAGAAATCACCAAAAATTGCAAGCATACTCAAAGTGA TGTTAATAATAAAAGCGGATATAGATTGACTGAANGCCCTACTTGCTTGG AACGGCCTATATCTCTTAAAAGCAATTGAAAACACTTGAGTACCTATGAA ACCATTGAAACCAGAAAAATAGTTCGACCTAGCCATTCTTGCTTAGAACG GCCTATATCTGCTTAAAACAAGGGAAAACACTGGAGTACATATGAAACCA TTGAAACCAGAAAAATAGGTAGGTCTAGCCCTACTTGCTTAGAACGGCCA ATATCTNGTATGAAACCATTGGGACCAGAAAAATAGTTCGGCCTAGCCCT ACTTGCTTAGAACGGCCAATATCTCTTAAAAACAAGTGAAAACACTGGAG AACCTATGAAACCATTGAAGCCAGAAAAATAGGTAGGTCTAGCCCTACTT ACTTAGAACGGCCAATACTGCTCGCAAGCTAGCAACATCACTGGAGTACA TATAAAACCATTGCAACCAGAAAAATAGTTCGGCCTAGCCCTACTTGCTT AGAACGGCCTATATCTCTTAAAAACAAGGGAAAACACTGGAGTACCTATG AAACCAGTGAAACCAGACAAATAGTTCGACATAACCCTTCTCTTGCTTAG CTAGTAGCCGGGCCAATTTGCCGATGTCTTGTAAAAACAAGGAAAAGCAC TGAAGTACATACAAAACCATTGAAACCAGAAAAATATTTTGGCCTAGCCC TAACCCTAGAACGGCCAATATCTCTTAAAAACACCAGACNGGAAAACACT GGAGTACGTATGAAACCATTGAAACCAGAAAAATAGTTCGGCCTAGCCCT ACTTGCTTAGAACGGCCAATATCTCTTAAAACAAGTGAAAACACTGGAGA ACCTATGAAACCATTGGGACCAGAAAGATAGTTCGACCTAGCCCTTCTTG CTTAGACCGGCCTATATCTCTTAAAAACACCAGACTACCTATGCCTAATG TCTGATGTAATATGTTTAAATAGTATATTATATATCATGTTACAACCATA CTACTCTATAATACGTCTAATGTTTTTTGGAATACCGTCAGATTCAGATC TGACGTGTATTGAAAAGGTCGACGATTTCGCCTGCCCATACATTGCGAGC TTGCCCGATAGGGGCTGTGTGTACGGCTGTTTAGAGTGACGTAGAAAATG TAGAAAACCACCTTCTATGATGATGGCTGAACAGTTTTGGAGTTCAGTAG ATAAGTTATGTAAGTTTATTGAAATGAAAATTTGATGAAGAATTTTGCAA AGTGTTGTTTGCGTGTTGTTTTAGGTGAAAAAGCAAACGTGGATGTTGTG TAAAAATCGGACACGCAACTCTTTAGTTTTTACTATGATAATAGTCAATA TTATAATAGATAAAAAAACTAATTACGAATTACGAATTACGGTCAACTCA GATGAGGGCGTAGTAGTGTGGTGATCATCGCTCTTTACTCTAATCGGGGA GGTCCGAGTCTGATTCCTATTGTAGTACTACAGTTCACTTGGCAACCCAG CTGGCACACAACGTTGTTTCAACGTTAATCTAACGTTAAATGGACGTTGT GAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCGGCTGGGAAGTGAA CACACTTTTGCCTGGGTCAACCCATACTACTCTGATACAAGAGTGTAGAT GATAAGCCAGGCATCGTGGTGTGTGGTGTCACTCGTCCTGCTCTGCGCCT GCGACAAGCTATATGCTCTCCCACGTTGTTCGATTGTCATGACTATCATG GTGTTTGTGTCTTGCGTGTACACGTTGAGAACATGTTTAAGCCTTAAAAC TTAAAATTTAAGAACATCCGAAGGCATCAGGAATTTTGAAACTTGAGAGC GGCCATTCCTGTCCATAGATATATGTTACGCCCGAAGGGCTAGATATGCA ACTTTAAGCTTTAATTCTCCAAAAAATAAGTGAAGCAAAAATTTGACTTT TTAAATTAGCATTTTAATTGTTTTCGGAGCGCGAGATAAAAAAGAGTTGG CGGCAAACGCTATTTCGCATCACTCAAACCAGTGAAATTGCTTGTTGTCA CGTGATTTCTTAGGTAGGAAATCCTATCAAAACTTGCTTCACTTTTCGAT AAAAGCCACGGATCTAGTCCTTCGGGCTTTACAGATCTGTGTTCCTGTCC TCTGGAGTTGAATTGAAATTAGAATCTGTTTTAACGTCAATATGGGTGAA TTTGAATCACAATAGAATATCTGATTCTTCGATTCTATTCTTAGACCTTT TTAGAACAGAAGATAAGCTTTCTTAGCACTTTAAGACACCCCCGGGGGGG GGGGTACTTAGGCAAAAATAAGTGCTGGGTATGTGCAGACGGTAAGGGTC GGGTTTTTCACCTTTCAAAGTCTCTCTAAGGGTTACAAAAATCAGGAAAT TTCAAAGTAGTCTCTCTAAGGGTGGGAAAAATCACGATTTTTAGAAAAAA ATTACAAAAAAGTCTCACTAAGGGTAGGAAATTTTTGAAAATAAGGAAAA ATTTTCGAAAAAGTCTCTCTAAGGGTCATTTTTTTACTAAAATTTGGTCT CTCTAAGGGTCGGTTTTCGGAGGTCCCGTCCGCACATACCCCTCATTCAC CAACCCTAGTACCCCCCCCCCCCCCTCATTCTCCAACCCTAGTCCCCCCC CCCCCGGGAAGACACCACGCCAAAAGTAGAACGATCGTTAAAAGTGTAAA CGAAGCAATGCCAAATATTTCAATTGTTCATCGGCCGGCTTTTATTTTAT TTTATTTAAGAGGCTCCAGAGGAATAAAGATTTTACTAAATTTCTGTGAT TACATAATAATTTAGCAAATGTTCGTTATTTGCAACACGGCCAAATCGTT ATTCAGCTGGACCAATCTTTGTATCACCAAATATTGTCATTTACAATATG GACTTTGTTTATTTGATATGTTCGAAATATATTATGGATATTACATTATC AAAAACGTGAGACTTACATAACTACCTGAAAATTTCACGTGACCTTCACA GCTATAAATATGGCGAAAAAATCTGTTAAAATCATTCAGCAACAAGCTAA GGTAACAAGACAACACAAAAAAAAACAAGATATTCTTAGGAAAACTCACC AACAGGAAATATGAAGGTTTTACTCGGACTTTTATTATGTGCAGTGGCAT CGCAAGCATTCTTATTCAAGAAGATCAAAACTGTGTCCGAATTGGATGTA AACAAATATTCTGGTCGTTGGTATGAGGTAAGGATGAAATTTCAAGCTAT TTTCTACCACACAATATGTCATTACCGAAATAATCTGAAATCAACCTTGA CCCCTGTGTATAATTGGCTATTTGATAATTATTGATACAATCATGGACAA AATGTTTTAGATAGAGGGGATTTCCATGCGAAATTTTAAACACCACAAAT GATTTTTATGCCCCTTAAACTACAGTTTTGTCGCTGAGTTTTAACATAAA ACTTAAGACTCAAGACCCTCCAAAATCGAAATATTCAATGGAAGAAAGTG GAAGTGCTAAAATAGCAATTCTCGCCCGAACTTTAAATTCTGAAAAACGT TACAATTCACTAAAATCTCACATATATTTCGACCATGATTGTAGCGCCAG ATAATATTCCCTGGCGTCTAGCAGTAACACAAATAAAGCCTGGGATACAT GGGGACGAGTTTGATTTTCTATAATGTGACTTTGACAGTTCTTTACAAAC GCGTACATACTCAATCGACCAAACTCTTCAATTTAATTTTTTTAGATGTA CAACTCATTGATCCAAAGACAAACATTCGAAAAAAATTCTTACTGCACCA CTGCTACTTGTAAGTTTATTCGTTCAAATTTTTATTCCTTTGAATTTTTA TTCGTTCAAATTTTTATTACAAAGATATTTATTTAAATTAGTTATTTATT TAAATTTTCCAAAGAAGAGCAATTTAAGGGTCAAAATAGTAAAATTTGGT TAAAACGCCCAAAATGCCTAATTTCTATCAATGAATAAGAGCAGGAAAAG AAATAGGCTTCTGCTCATCCTCTAGCGAAGAGAGTTTCTTATATAGGAAG TATATATCTATAGAGGTCTGCGATTCAGAATAGAAAAGAAAAAATTGAGG CTTTAAGTGCCAAAAAAAAAAATCAACCGACCCTCAACAAAATTTTACTG GTTCTTATCTAGAAAAATATACCTCTTTAGACGGATGACAGATAAACTTC CGGTACCGAGGCATTATATAAGCTGTTTTGTTTAACCAAACTCACCAAAA GCCATCGATGCCACAACAAAATATCTGCAAAACTTAATACTTCCCTGCTT ATGTTTATTTTTTCATTTTAGACCGACTTGCTGCCGACGGTAAAACCATC CTTGTCCATAACTCTGGTCGTATCAGTGCACCAAAAGGACGATTGAACGC CATCAATGGAACAGCGTACCAAACCGATGCTGCCAACTTCCCAGGGGAAT TAATCGTCAGCTTCCCAGGAACTCCACAATCCAAGAAAGCTAACTGTGAG TTGTGATTTTAACGAATCATTCGACATGACTTTCGTTGAAATGTCACCAC AACACAATACTTAAACAGACCCCTTCTCACAGAACCACTAGCACTCCTTC CCACTTGAAGAATTGACCAAAAAATCGTCCCTAGCGGAAAATTATCCGGC AATTCCAACTGAAAATAATCAAATTAACCAATCTTCGCTGCAAAATATCA TGCTATCCCCCCCTTTCCCACTGGAATTTTATGACTTAGAACAATGGAAT TTAAATCCCCAGCCACAAAAAAATCGAGTTTCAGTTCGTTATTATTAACC TCACTGGATATATAAATCCTACCCGGTCTCTGAGAAAACCTTAAAATGTT CTTAGCTTGTTCTTAACATTTCAGCCATCGAAGCCTCGTGTTCTTATATA GTTTTTTCTTATAAAAAAACAAACGGTTGCAACCTTTGTATCTAAACTAG AATTTTATTTTTGACTTTATATAGATTTAGTCGTTAAATTGGGACCTGAA GTTAATGGTGAATACGCCTACACCATTATTACCTCCAACTACAAAGCTTT CACATGGATCTTAGCCCGTGATGTCAAATCATTCAGAGCTAACTACGAAC AAGAAGCTCTAGAATACTTAAAGAATAATGGATACAATTGGTTCTGGAAT CGACCACGAAAAGTTTTCCAAGGTGAAGAATGTATTTATCCACCAATGTA AATTTTTCTGACATGTAATTTTATATTATGCTTTTTAAATGTTAATTGTC TTGTTGAAATATATTGTCGCTGAACATCATTTAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069647TCONS_00069647Clytia hemisphaericatranscript
TCONS_00069646TCONS_00069646Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069646-proteinTCONS_00069646-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_503supercontigscaffold_503:238498..249034 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67 0.71 2.62 1.11 0.62 0.49 0.24 0.56 0.34 2.15 1.35 0.98 141.39 60.09 7.82 42.14 4.55 55.26 56.82 65.68 270.04 249.93 209.42 119 110.69 151.34 195.87 105.69 2416.44 570.78