XLOC_043411 (gene) - C. hemisphaerica

Overview
NameXLOC_043411
Unique NameXLOC_043411
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:278063..282790-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043411 ID=XLOC_043411|Name=XLOC_043411|organism=Clytia hemisphaerica|type=gene|length=4728bp|location=Sequence derived from alignment at scaffold_506:278063..282790- (Clytia hemisphaerica)
ATCCACCTAATTTTTAAGCTTCGAAATAACAAAAATTAGAAAAAATGATC CATTGTGGCAGATTCACTACAAGCCAAATCGCAAAAATATTAGGTATTTT CCAAATCATATGTGCTATCATTATCACAGCTGTTGGTATAGGAATCGTTA TTAAATTTCGTGAGGTTGACCACACTCTACAAAGTGATAAATCAGTAGCC GATACTTATATTGATAATCCATGGACAACTCAATATGGTGCAGCAATATG GATGGGTTTAATTGTAAGTTTACCCATAGTCATTATAAAAAACCCTGGTT TGGTAATGTAATTATTTTAGCTTTATTGTCAATCTTTCCTTCGTTGTAAA TAAAAGGCAAGTTGTGATTTGCATACTTTTTTATCACGTTACCATTTTCG ACTCTTGGGATTGGTTTATTTTATGATCACATGATCAAAAACTATGCAAA ACAAATCAATTAAAGGTACGCAAGTTCTAACGGTTAACAATAGAAAGAAA AAAAAGCCTTCCAGACCGGGTTTTTCTATAATGACTATGGTTTACCGTCC GTTTGTACATACATGTTTTTATTTTATTTTATAAGCATAATGATTATAAG CATAAACGTCAGGGCTCGGTTTTTTTAGTACCTAAACAATGGCTCTATTG TTTGAGAACAATAGAATGCTAAGCATAATGTGAGCCTGGCTGATATAGGG ACAGACACTTGCTTTAAAAAACACACGTACTTGACTGTCTCTAATTCGAT TTTCAATTTTTTCGATTTTCATCGCATAAGGGAACGTATCGAATAGTAAA AGTTCCTTTATGGGAGCTTCTGATAAAAGATGACTTTCAATATTATCGAA AAATCGAGTGTGTTAAATAGTAGAACGTTGAATTAGGGAGCGTCAATTGT ATAATTCGAACTATACTTTAATAGTATTCCATTTGTAGTTTTTCGATTAC GATCTTTGGGCGATCTTTCAAAGCCTTAGTGCAAGCTGTTTTTTGAAATC TGCTCGCACTTATTGCAATAAAACAATAGGGTATTATTCCAGTAAATATT TTTCTTTCATCCTCCTCTCACCCAAAGTAGAAATTCTGAATAAAGGGGGT ACATAGTCTACGGTGGGATATTCTTCAGNCGTCAATTGTATAGTTCGAAC TATACTTTAATAGTATTCCATTTGTAGTTTTTCGATTTACGATTTTTCAA AGCCTTAGTGCAAGCTGTTTTTTGGAATCTGCTCGCACTTATTGCAATAA AACAATAGGGTATTATTCCAGTAAATATTTTTCTTTCATGCCTCCTCTCA CCCAAAGTAGAAATTCTGAATAAAGGGGGTACATAGTCTACGGTGGGATT ATTCAATCTTTTTGTAACAGACAATCTGCTCCAGAAATATGGGAATTTTC TATATACCCAGGACAGAAATTTTTGATATCCCAAGGGGTAAATTATCGAA TGATCAAAAGATTTCTTTTTCTCATAGATGGCAATAGCAGGAGCTTTTGG ATGTTTTGCTGATATTAAACCACACAAGTCTAAATATGTAAGCAACACTG TTTTTGATTTCTGAGAATATTCTGTATTGTGATGGCACTATGATATGTGT ATTGATGCATAGAGATTCGATTCAGCCCTTCGGGCTTATACTTCATCGGT AATAATGCGTTACGTATATAACATGGTGATAATCGAGTGCCCCCCCTTGG GGGATATGGCTATTCTTATGAAGTATATTATAATGATAAAACATGAAATT CCACCATCTCACCGACTTTTAAGCGCGTTAAACTACAATTGGAAAGTAGA GTTTTAACTCTGAGTTTTAACATGAGACTTAAGCCTTAGGGTCTTAGGAT CTCAGGATTTAAAAGCTCAAATTTACTCTAATAGGGCTTGAAATATAGCC TAGAAGCCACCAAACCCCTCCAAAATCGAAATATTCAATGAAAGAGAGTT GAAGTGCTAAAATTGCCTGAAAAATGAAATTCTCAGAGCATTAAAATACA CTAAAATCTCGATATATTTCGACCATAATTGTACACAAAAATTGGCTGAA ATTTGACTTGCGCATACATTTATTAAAACTTTCTAATTATTTCTTTTCAG ATGTACGGTACCATGTTTCTAAACATTGTCGTCGTTTTAGCCGCCATTTT ACTTCTCATCTTTTCCCATCAAACAATCACGTGGTTTGACACGTGCCAAT ATCAATATCACGTGTTTCATACTCATGTTATGCAAGTAAGAGACTGTTCT GAAGACGATAAATCAACTGGCAATACAATGTATTGGACTGTCTTTGTCGT TAGTTTGTTGGTGATCCCGATTACAATTATGATGCTGGTTTTATTGGGAT TCTCAAATTCATCATTGTTGGAAGAAATGTGCCAAGGAACGTGTTTCAGG AAAATGGTTTATAAAAGTAAAGGACCAGATAGTCAGGTAAATCTTCTTTT TCTAGTCTTTCTTTTTCCAATAACATTGAGTCATATTTTGGAAATTGGTT AGCTTTTTGGGTCTATTGTCGGTTTTTTTCAAGTTCACATGACTGTATTT CCATTGGCTGAGCATTTATACAGGGTTTGTAAATAGTTGTGCCGTACTTG TTCTCGGAAAGTGCAGGCAATTGCTATTTCCTTTTTGGATTAAGTCTAAA GACTGATTTTCTCCTTTTATTTGCTTAATCTTATACAATAGTATTTTTGT CCTTGCAACACAAAAATTTAAGTTCTCGCCTAGTACACTGATCTACCTCC CTATGTGCTAAAATCCGCATGAAAGAGGAATAGGTTCGAATCTACAAGTG TGAACGATGTCAAATTTCTGAAGTCATTACATTGATACAAGTTTTTTTTT CATAAGAACATTCAAAATTTTTGAAGCCTTCAAATATTCTTAACTTGTTT AGCTTTAAGCCTAAAAATATTCTGAACATGTTCTTATTTTCACCATTTTT TGAGCAATCTTGTCAATTTCACCCAATTTGAAATTGGGTGTTTTAGAGTC CGCAAAGCCTTAAAATGTTCTTATCTTGTTCTTAACATTTTGGCCATCGA AGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAACGTCTATGTACTC ACAGATGCAGATCTTTGTTTCATTCGACCCCTTGTAAACTGGAACACAGT CCCCTGGAAGAGTTTGGATTGTTAGGTGTATTGAATTTTTTTGAATAGAG GTTTCTTCAACTTTTTCTTCATTCAAAATTTCAACAGGTCAGCTACAAGA CAAAGAACACGCACGAGTTCAATAAAGAAATGCATGTCAATAATGGTGGG GCACAAAAAAAAGAACAGTCAATGAATTACAGTCAACCTGCAATTTATTG TTGATATTACTAATGGTAAAGTATGTATTGTGAAAGATCGAGTTACAATG GTATTTTTAAAAGTGATAGGTACGGCGGTGGATTTTCAAAATCAGCGCAT TTGGGACCAGCTTCTTTAGAAATGGAAAAAAAGTCCTGGGTACTATATTA CAGATGAAAATTATATCAAAAATTACTTGTTATTGATTCATAAAATAACA TTGTACCTGAAGTGGATAAATTTTCGCAAAATGAAGATTTTAAATTTTCG AGTCGACAAAATTTCGTGAATTGGCCAATTTATCGCCTAATTTTTTTCTT TTTTTCCGGATTATTCATCTTTTCACAAGGACTAAATTTCGCAGAAATTG TCAAAAATCGTGAAAATTCTAATCGACGTAAAATTTACTTCAAGTTACTC AAAGAAAAACACAGAGATAAATGAGTTTTTACGACTAGCTTGCAATATAA ACAGACCTGGATTAATCGTCGGTTTTTTGCATTTTTGCGGACATAAGTCC GTCAACTTCGATTTCGTGGACACAAAAAGCGTAGGAATATAGGAGCACGT TTGTTTCCTTCGGAGAAGTTAGAGAATGAAAGTCTGTCTATTGATTTTAA CGAGACAAAAACCAGACGACTTCACGTCTACTTATATTGCGAGCTAGCCG TTTTTACACTCCACTAACTTGAGAGTGTTTCCAAAATTTACATTGCATTT GACAATTGTGCAAGTCATTCATTCATAGATGAATAGAGGGACTTTATCAA AGACATTCCTTAATTCCTAACGAATCACCTTGCCGTGCATGAAGCTCGAT TGGGCAACTTGTAATTATTATCCAGTTTAGCAGCAACCACCTTCCCAAAG CCACACGAAAAATCAACCCTTTCTTGAAAGTTTTTGACCATTTTAAGACA AAATATGGTCAGATTTTTCAATTTTTACACCCTTGGAGTGCAATTTTTCT CATGTCTTCATCCTTGCAGTGCACTTCGAAAAGCTTGGAAAAAGCCGGGA CACGCACATACTGTACCTCGTTTACCTTAATTGCTCCTCCCCCGATCGAT ATGCACGATCATAATTTGCGTAGGTTTATCGTGTTTCAAGATCTGAGAGA ATTTTATACAAGGTTGAGACTGGACTTGCCGTTGCTTGATCAAGCTGTCA ACATGAAGAATGTCGTTAATACTAAATAGACAATTTTTTTAATATTTTAT ATATAAAAAGGTATTCTTTTAGACATATTGTAGAGATAATAATAATTTGT AATTTTTTTTTCATACATAGATTTAACACTAAAATTCAACTCTAAAACTT TTGAATTGTTATTAACTGCTCACAGCTCAAAAATATTTTCTTAGAGATGA GATTTCAGTCTGCACTTTTACAATAGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069720TCONS_00069720Clytia hemisphaericatranscript
TCONS_00069719TCONS_00069719Clytia hemisphaericatranscript
TCONS_00069718TCONS_00069718Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069718-proteinTCONS_00069718-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:278063..282790 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.58 2.08 0.58 0.33 78.75 56.2 44.44 47.21 29.41 39.79 25.12 17.41 11.78 8.72 6.3 7.8 17 14.85 6.24 10.82 22.9 20 12.19 16.03 16.89 18.77 106.89 116.17 8.91 6.07