XLOC_043418 (gene) - C. hemisphaerica

Overview
NameXLOC_043418
Unique NameXLOC_043418
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:468427..475395-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043418 ID=XLOC_043418|Name=XLOC_043418|organism=Clytia hemisphaerica|type=gene|length=6969bp|location=Sequence derived from alignment at scaffold_506:468427..475395- (Clytia hemisphaerica)
GAAATTTTCATATTATCTTATATCAAATTAGAACTGGATATTTTAGAAAG AGCCAAAATTAAAAACCCTTCATTTTTGTTTACTTATTCAACATTATTTA CAGGATCCAAATTATCCTTCGAAGAATTTGCTCAAATCCGGAAAATGGTT ATGTGATAGAAACAATCCTCATCAATCGGCTGAAGTTGAAATATCTTTTT CAAGAGCAACAACAATTCACTTCATTGATATAGGTAAGATGACTTGCACA TTAGACAAGGTGGAACTTTTCACATTGTTTTTTTTAAATGGCAGAAAGGT AACAACTGGCTTTGTTTAACACTGAAATATTTCAAAACACTCCTGAACAT TCTCTCAAGCTTTGGACAAAAACTAAATGTTATTCTGATCGAGTATTTGA AAATTTATTTTAATCTATTTATAGGGAACAGTGGTAGCTGTTATGTAGAT ATCTTAGTACGTCATTCTCTGAAAGGAAATGACTTCAAAAGTCTAATACC AACTTTCACATTCATGTCCGTGCCAGAAAGTAAATCAGGGGAAAATAAAT GTAAAGTTGAAATGTTCAAACAAGGTAAATTAGATTTTTTTATCAATGTT TTAATCAGATCTTACATTTAGGATAAAGATCCTATCTGTTTATTCTCTCA ATGTTTTTCCCTTAGAATCAAAGTCATCTTGTTTTCTCAGTTATATTTTT GTATTTTTATTTTTCTGTGACAACGTGCCTTTTCTCAAATTACTAAGAAT TTGTGGTAATAAAGCCTTTTTAGTGGAAAAAGAACCTGTTTTTGCCAACA ACTAGATATTTTTGAAAATATGACCTGGAAAAAAAAAATTTAAAAGTCTA TAATTAATAAATTTTAGACAGAATGATGGCTGATGTCAGAGATGAAAAAT GGGATGTCCTGAAGATAGTGTGCCGCCAACCATACAAACCCAATGCTCAA TATGGCATCAGCTTTGTTAATGTAAGGGGATGTAGTTCTGGAACTAATCA AGCAAAAGATGTAAAAGCAAAGCCTCCTCAACCGTCAAATCAATCTGCAC TAAATTCGTTTTTCGGATTTAATAACACTGGGTGAGTTTTCTGATTCAAT TTAATTGATTCAACAATTTTTCATCTGTGATGATCATAAAGAAGCTTGCT TCACTTTGCTGTATCTTTATAATGATGTCTTTTTTTTGCTCATTGGCAAT TATTCTAGACACGAGATAATGCTCAAAGATTTAAAGCATAATAACTTGTA AATGAATGGTGTTTTTCTTGTCTGAAAAGCAGTTATTATTCTATGTGAAA CAAGAAATTTAGTTATTATTTTAAACTAAACCAGTTATCATCTTTTTCCT TGTTATTTAAGTCTGGTCTCCCCAAAGCCTGGAAAAACACTGGCATTAAA ATCTAAATCACCTATACTGAAATCACCTCATCAAGTTATGTTGACAAAGA CAAAAGGTTTGTTTATTGAAATTATTCTTCAGCATAGTTTTCATGGTTCT TTATTATTTTTTTAAATACTTGAATTTAAATTTCGCACACAATTCCTGAT GCATAAACTGTATAACATTTTTTTATCATTTAGTTACAAATGAAATTCAA GAAAGCCCAACCAAATATTCGTCAGAAAAGTTGAAGGTTTGTTTATTACT TTCTTATCCTTTGTTCACTTCTTGTATACTTTTTGGGGTTCTAGGAAAAC TGCCCCCGAGAAAATTGCCCCCCGGAAAACTGCCCCCGGAAAATTGCCCC CTAGAAAATTGCCCCCTAGGAAAATTGCCCCCTAGGAAAATTGCCCCCTA GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTTGCTTGAAATCTTACACCCTCTTCTCACAGACCCGGTAGG ATTTTTTTAGCCAGTGGGGATAAAAATAACGGACTGAAAGTCGATATTCC TTTATTTTTTATGGCTGGGGAAAAATCAGAAAATTCAATGGCCATTTGAA GTTTCATTGGATTTTATAAAAAAGTGGAAAAAAAGATGGCGGTGGGGGGT AGCAATTTTCTAGGGGGCAATTTTCCTAGGGGGCAATTTTCCGGGGGGCA GTTTACCGGGGGGCAGTTTTCTCGGGGGCAATTTTCCTGACACCACTTTT TGGACCTACCTGGAGGTCCTTTAATTTGACTGTTGTCCGTCCGTCCGTTC GTCTGTTACAAGCTTTTTTGGGACTGGCTCATTAGTTTTTTTCATTTTTA GCACAGTAATGCAAAATAGCAATGCCTAAAAGGTGACGGAGCCTGATTTT TGAGAAAAAAAAATTGGGGGCAAATTTGGGCCAAAACTGCCTAAAAATAG GGTTTTTTGGATTTTGTGCAAAATTGCTTCATTAGTTTTTCCTGATATTT GGCAGAAAGATAGAGTGCTAGGTGGCCTAAATTGCGGCTGATGTGATTTT TCCCTTTAGTCGTTTTGAGGGAAAATGGCGATTGGCATGGTAATAGAAAA AAATGATTCTAATTTTTTTTACATAAAGATAGAGGGAAAGGTTTTCCATA ATTTTTTTCTTGCAGTAAAATTCTGATTTTCTTATGTTGAAACAAAAATA CCCTTCAGTAAATTTATGGGGAAATGAGTATTTCTCGCGATTGGCTTGGT ATTATTTTCTGAATTTTAGTTTGTCTGACTATTGTTGCCATTATTCTATT TTTTTTATTACACTATAGCCTTTAGGTAGGTCCATTCAGCATGTAGCTTG TTTTTCGTTTATTCCTTAATGAATAGAATCAACAGAAATATTGAAAAATG AAGACATCATGAAATACTAGGTTGATTTTAATATTTTTGTATAATAATTG AGCAAACTTTCAATATTACAATTTTAGTTCCTCAATGATGCAGAAGAGTT TTTGTATAGAGCTGGTTTTGATGAAGCCATCAAATTGGGGAAGCCAATCC TAATGGCAGGTACACCAAATTTCATGAACTGTTATACTTCGAAAATTACT CAAACTAGATTATTATTTTATTCTTGCAGAAAAAAATTCATAAAGATTAA TGCAATGCTACTTTCTGATAACACCCAGTAACACCTACCTTTTATACATA CCCCAGCTGGCACACAACGTTCTTTTAACGTTTATCTAACGTTCACAACG TCCATGTAATGTTAGATGAACGTTGAAACAACATTGTTTGCCAACTGGGA CTTAAGATCAGATTTTTCTTGGAATGACTGTTTTTAACCAAAATTGTTAT TCTCTTTAGAATACAGAGAAATGATTGAAAAAGAACGAGGACAAAAATTG TCAAGGCAGCAAAAGAAACTTCTTGTATATGTAGGTATTACTTATTTACA TCTTGCTCCTGTCTTATTGATAAACAATCAGATTTTCACTAATCCAATTT TTCTTCTTTAGATTGCTACTGAAATGAAGAAAACTTTACAAGCAGAGAAA AACAATGCTAAGGTAATGTTTTAGAATAATAAGTTTTTACGATTTTTTTC GTTAAAAAGTAAATGAATGTAAAGGTCAACCCTCTTTGATTCACACCTCT ACTATTCAAATCAATCTTCTTAATAGAAAATCAGCCCAAATTTGAGTCCT GTCATAATTTAAAAAAAATTTGCTTCGTGAAGTTTGAATTAGAGAAAGTC AACTGTAACAGCAAAGATATAAAGGGCTGAGAATGACAAACCATTTCATT GGTGGTCATTTTGAGTGTATCATACAGAAAAATCTCTTTCTACAGAATTC TTTATGTTTCCTCTCTTCTCGGGTAAAAAAATCACTTTTCGTTAGAATTC TGACTTTGGCTGATTAATAAGCATGAATTACACGCCATTGTAGAGTACCT TTAGGGAAGAAATTTTTGCGGAATTAAATTTTGCGGTTTTTTGACAAATC CGTAAAATTAAATTCCATGAAACACAAATAATCTAGATTTAAAAAATCAC CTCTAAAATATGCCATTTTGTAAACAAAACATTCTCTCAACTGCAAAATT AAATTCAACGAAACGAAATTTTGAGCTGTGAATCACGAAAATTTCTTCCC CCAAAAATTTCTTCTCGTATACTATAAATGTACTTTTAATTATGTTTTCA GATTTCATCAACTCCACCAAATATGAATAGTCTTGAACGTGAATGTACAA AATGTGAAGTCAGGTAGTATATAAATTATTTCAGAAACTCAAAATAAAAT TTAAAAAATTCAGTATTTAAGGATTCACTTTATTAAACACACTTTAGGAG GACTTAAAAATTGAGCTTGCATATGTTTAACAGAATAACTTTTTTATAGT AAGTCAAACCTATTTTTCAATCAAAAAAACGAATCTCAGGTAAATAAAAA CTGCACCTCCGACAATTAGCCCTTAGAATGACTAAATTGTGCAAAACAGT AAGGAAATTAAGTTAATCTTTAATTATTTTACTTTTTTTAGTTTTTCAAT TGAAGTTATGGAAATCCATGAGCAAATTTGTACAGCAACTCCCAGGACTA AACCAAGACAAAATCGAAAATCCATATGTTTTGATTATACCATGTCAGAT GAGGATAAATCAATACAAAGTTTCAATAAAAGAAAACCATCAATGTCCAC AAAATTAACATCTGCTGGTGAAACTTCTGCTTCATCAGCATCCTCTAGCC CTGAATCTCGTTGGTATGGTAAAACAATACCTAAAAGCTCTGGATCAAAT ATTACAACAACACCAAAAAGCTCAGGCTCTACAGCTACAATAACATTGAA ATCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTAAAG CAGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATAGATACA CATGTGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGATTC TCCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATGTAA AATCTAATAACAATAGTGATGATTTCTTTNTCTACAGCTACAATAACATT GAAATCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTA AGGCAGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATCAAT ACACATGCGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGA TTCTCCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATG TAAAATCTAATAACAATAGTGATGATTTCTTTGATGACATGAATCTCAGT GACTTTGAGGATGATACTACTAATAACGATGATGATTTAGTTGTTACAAA AGACACAAATTTCAAAAGGGACAATTTTCAGAACTCTATTTCTATAAATG ATGATGACGATGATATCATAATTTCCAAAGAAAAGAATAACTCACATAAT ACACAATATGTTGAATGCCCAATGTGTTTTGAACTCATGAGTACCACTAT TATTGAACTACATGCTTCTACGTGTAATGGAAAAACAGAGACAACACCAC AAACTTTCAATAATAAACCAAGCTCAAATGCATTTGCAGCTACTCCATAT CTTTCAAGTGTCAATAGACAAGCAAACAAGATGGGTTCTAATGCATCTAC AGTGAGTCCGAATCTTTCAACAACTAACGGTTCATTGGAGAATCACCAAC ACCAAGGCGATACTCAAGAATGTCCTGTCTGTAACAAACAAATCAATAAA TATAAAATTGCTGTCCATGTTGTTTTGTGTACTGGTAAGGGTCTGGATAA TGATAAAGAAGATGATGACCTACCATCCATTTTCAACAGAAAATCTTCTA GTACTTCCGCAACGAAAACAAAGACTTCTAAAAAGTCTTCTTCTACTAAT GCTAGTCCCTCCCCTTCAGGGGCTCATAATGTGATGAGTGTTATGCACAA GCCTTCAGGGAGCCACAATGCAATGAACACTTTCCAAAATACAAACAACA CTGGTGCCAGTTATAATCCTTCGGGAGCTCATAATACACCAACTAATAGT ATACTAGTTCCTGACCATGATTATGGGAAAAGAGAGGAAGCTTCTTGTCC CATATGCTCAATAACATTGGATAAGAGTATGATTGAAGTACACGTTAATA TGTGTTTAGACAGATTGCAATGAAGCTGTTTGAATTCAGATATTTAAGTT GTATTTAAAGGGGTTATCAGATGATTCTTGATATTTGGCTTAGAGATACC TTTTGACCTATTTTTTTTCCAAAGCTGAGATACTTGACTTTGAAATTTCT AAAAATAAGTCTTTACACAGTCTTTACGTTGAATTTCTATTATTTTCAAG TCAAAATTTTAAAATTCAGAGTCGAATATCTCAGCTTTGGAAAATAATTG GGTCATAAACTTTGGAGGTGTTTCTTAGGACCATAAAAGGTATCTCTAAG CCAAATATAAAAAATCATCTGATAATCCCTTTAAAGTTGACTTTTGATCT CAATGCAAGATGACATTACATAATTTTCTAATAATTACTGAGATGCTATT TGGCTTTGTCATAATTTGACTATGTTGACTATTTGAATAATGCAATAAGA GGTCATTTTGGATTTTGATATTCTTGAAATACATTATATATTTTTATCTT ATTTGAGTCAAACCTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069733TCONS_00069733Clytia hemisphaericatranscript
TCONS_00069732TCONS_00069732Clytia hemisphaericatranscript
TCONS_00069731TCONS_00069731Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069731-proteinTCONS_00069731-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:468427..475395 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64 1.53 0.72 0.59 3.47 2.38 4.42 5.28 2.97 3.7 1.73 1.66 1.88 1.11 2.21 2.31 2.83 2.69 0.87 1.01 1.92 2.42 2.17 2.69 3.57 4.52 0.56 0.58 1.62 2.09