XLOC_043437 (gene) - C. hemisphaerica

Overview
NameXLOC_043437
Unique NameXLOC_043437
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_507:131262..141755+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043437 ID=XLOC_043437|Name=XLOC_043437|organism=Clytia hemisphaerica|type=gene|length=10494bp|location=Sequence derived from alignment at scaffold_507:131262..141755+ (Clytia hemisphaerica)
GAATCCTTAGattttttcgtaaattttttattatttgcaTTGTTATTTTC CTCTTACTTATATTccttacctcttttagtaaaaGTTGAATAAAATGGCT GTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCGACATGA AATGCTAACTTGGATCAATGACAGTTTACaatcaaattttacaaaaatag aaCAAATGGCTTCAggtatacatttttttaaatcctgaAAATAGTCGTGT TTCGCGgcattttaatttcgcggttttctgAACTCGACCGCGAAACCACG AAATTTTCATGCAATGAAGTATTTTGACGGCCAGATGACTATTCTGACGA CCAATTTTCCACCGGTCGGTGGACGACTATCCACCGATCGAATAACTATC TAGATGGCCGAATTTCCCACAATTCTAACCCTCTTGGCGACCAGGGCTTG GGTAGAATCACACAAATAAATCACTGTATTAATCGGATTAATGCACAGCA GGGGAATAGGAATGGCCAAATACCATGTACCGTGGTTTTTCTAATCTAAC GCGTAGTCTAATTATTAACGCGTagccaaaattctgcataattaatTTCA CTCTAATTATTACGCGTGATCAAGccttggaaaagaaaaattagacagga aagttttatttttgataaacttctttctttcaaaaacacaaattaAAGGG ATCTTCGTCATCCTCCTCTGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTAATGCTTGTTAATACATTATACGATCTATATGTAAT ATATATTACACAAGCCTTTAACGCGTACTTAAAACACTTGAATATCGTAA TTAATTGTTCTCTTGTTTTTCACGCGTAGCgtcgaaaataattatttatt gccacgcgttaaattagaaaaaacacGGTAGGGTTGCAATTTTTAGCGAA TATAAAGAAATCAATATtaatcgataacaatcgaaAGCAATCAGCGATTA ATCGATAGCaatcgataacaatcgaatCCAATCGATAAGAACGTAAAGTC TTAGTATCGATTGgctatcgattatttatcgattatttatcgatcactat cgattattatcgattaaaatcgattaatatcgattaatatcgattgATTT CCCGTATCGATTTCATCGATTGGGTACGCGCCTggttcattgcgtcacag caaaaagtttgtttttattttagtttgtatctttgaaataccccatcgga tttaggaagggtgtcggatttaggacgaCTCACagtatttgtttcaatcc gtgatcctaaggcttaatttttttttctcatcttcaatttactgaagaaa gcatgaatttgatgcgagagttagattgtcaacaaagtgctgtaaaaaat aattgaatgaaagaagaacttaagatcttaaatatttaaatttaaatgaa GAATTGTTGCGAAAAAccaaaccggctgggaacagtagttttgccagaaa agttttatttttgattggttcaatcgaaataggagatttggaaaaacttt ttatgcttggttttttgcacaaacccctgtaactatgtgCAAGCACCCCA TTGCTAAGATattgaaaccactgaaaatgaaagtaaaatcggcccgcaCT CCAAGTCCagtaatcttgatataggagtttaagcaaAGACTGCCTGTACT GTACGCAGCAGCAATAAAAATAATCATAACAATACTCAAAAAAATTACGT TCCCGtcttttttactgttttttgcCTAGGCAAAATAGCATACATAGTAA GTATATAAGCAGGCTatgcctttaattggctgtaaaaaattTTTGCAACT GTAGAATTTGGTACAATTTTCAacaatatagaccttttttcaaagaggac atcctgttgaataattatgtattccagtcataaaaacaatgataaagtcA TGCATAatttactgtatcatgcatattgtaataattatgcatggttttat cattgtttttctgctggactacataattattcaacagggtggcctctttg aaaaaggtctattagggGCCACTCACATATCAATTTTCCCACACTTAAGC ATCATTCATACGCTAATTAAAAAACCCACCCACCCCCCTACCCTTAGCAT CATATTATGAAATAAACCGGAAATAGATGAAAACCCTTTTTCCTTTCTCA CTTCAAGTATTGATGTTCAACTGCCAGAGAAGTTGCTTCCCCCTTCTGTC TGTTTGGTACATTTCGCTCGCTTGTTTTTCTAATAGTGGTTTTGTTATAT GACTTTTACACAGATTGGATCCCAGACCCACATTAGTTGTGATGCGGGAA AAAAAGGCCCCAAACTTTTTTAACATAATGAGCGTCTCCGGCATTTTACT ATACCAATTTATTCTCAATGCCGTGAAAAAGAGACAAATTTGAAGAAGTG AGGATGTTTTGTTGAATCTTGAATATGAAGAGGCTGCTACCAGAAAAATA ATAAGTATGAAAGTTAtagttttctggaaatttgaacaTCTCTTGGACCT CGAAAATTGATATGTCTAGTAGATTTTCTTAGTGTCACTCTATCTAATCC ACCCACCCTATAGCTTCGGAATGGCGCTAAGCGCGGTCAAAATCAATATG TGAGTGCCCCTTTAGAACAattctatttttaaacaaaattaaccatcaaa ttttttcatcttcctcCTTCATCTTCAATCAAGCACTCAAAATCTACTAA AGCTGAgtacataagatattcttatgaTTATTGATATTTCCTGAAACACT GTTTGTTGCGTGCTGCTATGGAGTGCATGACGCAACTCACATAACAACTA ACGCATAGTGCGCAAGGAGGTTCCAGGTACCACCtaaaaattcaggtccc acctaacCCTAAAATTCTCACCCTCAATCCAGACTACCAGATCCCAGCTG AAAAATCCCCACACAAAATTATACTAAATTCAGCAACGAAACAAAAATTC CTACTGTATAATGATAAAAAGGAGAAAGGTTTAGTATgtaaaagaattat ttatagAATATGAAATATAGAAGAAATTATAATTGAattggaaataagaa aaaactaacatACTTTTACCAAAACACCAGACTCCCATCTAAAGAAATTA ATCCCCACCTTAAACTTATTTGTCCCacctaaaacctgaaaatttccaaa tcccagctggaaatttttgacccagaACACCAAATCCCCCActatcttgg ggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNtttttgggggggggggtgcacactatgaaCTTACA AAGTCCCCTTCTGTTGGATGATCATTTTGGGTGCCTCATcatggaagata atttgttttgatgctccctggctttgggaagtagtgATGTTTATGGTTGT TTTCAATGGGAAATAGCAAACTTGAGTTTACATgtatcatttagtttttg cttttttgtgGATTTTCTGCTAATCCAACGGCAGCGCAGTTTGGTTACTT TACAAATGTCACTCAAATGTTAATTGTGGCAATGTGTGTTGTCTATGCAT TTGTTCGCCATTTTTGCCATCATGTCTTGGAAAAATAGTGTTAAGATCCC AGAAATGTGCCAGGAAAGTTACAACAAATGAGACAATTTAATCCTTAAGT CAAACTTTCAAAGTGGCAATTACAATGTTTATaactcatcaaaatttttc tgaaagGGGTGATAAGTGTTGTCTCATCCTTTTCTCTAGTCTATCATTTT GATAAACCTCAGTTGATTTAGATCactttgttgaatttttaaaagCCCTT TTAACTatcttactcaaaatttattgtaGTAAATGATACCGTAAGATAAA ATTCTAGTCCATTTGACAATGCATACTTCTAATTTAAAAAACCTGAACCC TACTAcaggaccttgaaaaccttgaaaaccttgaaaatggaccactcaac cttgaaaaccttgaaatccatcaattttctgggaaaacccttgaaaacct tgagaaatcgctaaaaaccttgaaaagtagTTCTTCATATTCATTCTTTT TGTCATACAAGCTTTTTAATAGGGCAGTGGCTGAGTCTAGGTTTTTCTCT AGAATCGCAAATTGAGGTATCTCAATCCCTTTACAATGAActagtttttt tcattttttctatcaATTGTCTGCTAGTAGTATCTTACCAGATCTTACAA AACTTATCTGAGAGCAGGGGTCTTATTTTGGCCCGGTGAATGGCAAATTT CGGCAGCCTAAAGACTCtaaacaaattaaattccctgGTCTTGGAAATCC ATTTGCTGGCCgatgaaattttgctgctttctATCCAGTCAttcaaaaag taagaataagtaCGTTCTTAAACTGTTTGTCATggggaaatttccaaaaa ttgccTGCGACGCTAAACCTTTATAACATTTAGAGAATTCTATATTCACA TGTTTCTGTTGTGATTCCATGTCTCAAGGAATGCAacatattcttttatc attagctGAGTTTTTGAGCCCTAGGAAATTGGCTGTTCCCCAATTTTCTT CAGGCCATTAATCATTCCATTCATATTATGTCACGTTACCCTATTTATGA ACTGGATACCCCAGAGTATTCTGGTTGACGTCTTGGAACAATGGCCGTTC ATCCTTAAAATTTCGAGCATCGAAAATAATTTCCTTAAAACAACACTTCT GCCTTTTGAAAGagtcttaaaaatcaaaattttctcttgtTAGCGCAAAC CATGGTCACTGTAAACATTTGGCTTTTActtctaattctttatttcgACA GTTGAAAGACTAGGTAGCCGGAGTTAAAATGTGGTATATATCGTTCTCGA GAGGGAGATAGGAATTTTACTGTGGAAATAATTCGCCGGCTGCCAAAAgc caataaattttatttgccgtcctctatttttctttcgcCTAGTaccactc tgaaaaaaaaaccaaaacctgTTGAGAGCCATGTCAACTGAGTatcaaaa aaaccttgaaatatGCCAAATCCTTTgccaaaaaccttgaaaaaccactt aaaaatgaccaaaaaaaccttgaaaaccttgaaaatcctgaaaaaaaatt tgtagacACCCTGCAGCAATCTTGATTTATTTTACCACTAACAGAAAAAG CTCCCACCCCCTCCCTAGTACGAAAAGGGTGGACAGAATTCTCTCCTTTT GAGATATGAATATATACATTCAACTTCCCAGCaagaagaatttaaaaaaa cattttaacgaCCTCCATTCAGACTCACAAAGCCTAGTTGCAACACAGAT ATAAAATATTGACTAgctctttcaaaaaaattgactagctctttcaaaaa aattgtcaaaaaatttgaaattcattaaCATTGAGTCAAATAGAAGACTT TTTGCTAAACAGGATACTGCATTTTTAGTGCTTCTCGTGTCATATATCGA GGCGCATATTTCCAGGGGTTTTCTGCTATCAGTTAATGATAGTAGAAACT CCATCTTAAATTTAGTTTTGAAACTCCTTgataaaaaatatcttttttga aaaagttttgtaaTCTTGCAAACACTAGGTATTTCTCGTTTGCTCTATTT GAGTTGTTTTGCTTGATGATTTTTTAACATTTGAGTAGTCTTGTTATATT TTCTTAGGTAAAAATGTCTTGAGTATACAATATTCTTTCTTAACAAAAGC AAAACTCTCACCACAAGGGGTCTATCATGCACCCACAGTTAGTGCATTTA GTAGATTAGATGAATTGTGAAACCTTTTGTTTTTGTCTTCTAACTGAACC TGAAGGGCTTTGTAAACAAGATTGTTTGGATAtcctgtttaaaatttttc atttctgaTTTCCTCTTTAGGTGCTGCATATTGTCAATTTCTTGATATGC TGTTTGAAAGTGAGTCaagtttttattggattttatGATTTGACTGGTTA TGGATGCATTGTGTTCTGCAGGTTTTTAATGTCCCCTATCTGGGTCCCGA ATCCCCCATTTGTATTTCTCTTCTCCCTGACCCACCCTTTTCTTCGATTC CCACACTTGAAGAACTGTCAAGAACAATAAATTTACATCCTCTTTTATAA CTTAGCAATCGAGTAATATTTCCCTGCAGCAAACATACAAATATATAAAC ATTTCTGCACTCAGCTGCACTTCACATAAGATGTTTTTGAAATCTCCATT GGGCTTAGCCCTCCCCATCGAGATAGAAATATTCAATTACCCCTCCTAGA CAGAAGAGGATCCCATGGCTTTCCTAGTCATATCTATTAATTTCCTTTTC AGACTGTGTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTTAGAACATG AGTACATTGTCAATTGGAAACTGCTACAAAATGGCTTCAAAAAGGTTGGC GTAGATAAGGTAAGTGGTGGAATGTTTACTTTGAAGCTTATTTCTCTACA GAGTTTAGGGGTtgacaaatttgattttgatggaCATACAATTGTTGCAC TTTTACCAATCCTTCTTTTTGGGTATATTTTGATGAGgtagtattatttt ttgttatcaGGTTTTCTCCTATAATTATTCCACCGTTTTTATCGTGTTAT TTCCGTTTCCCATAGGTTACCTCATCTTGTTTTGACTTTTCGTTTAGACT ATACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATTTCGAATT TTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACAAGAGT ACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACGGAAAG AAACCTGCTGCAGCTGGCTCAAGAAGTATGGCAGCTCCCTCAAAGTCAAG GGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAA AAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACACT GTAACTGCCGAAGTAAGTTGTACTTGGTTGACTGCCAACAGAAAGAAACT CTCTATAGTAGGGggggaatttgtaaaatcgctcgacttttttagtcaaa gcacttatACATTATTGGAAAGGTAAGATGTAGGGGAATCAAAATAACAT AGGTTCCAATTTTTTTTCGTACACTTTGGTGTGTTTTTCAGATAAATATG ACGGTCTCAGGCAAAAGTCATAGGGTCAAAATTTAATGAAAATTTTAGCT TCAGAAAAGAGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAATAGT GTGTTTTTTTTTCAACCAGAAATAGCTTTTTTGTCCACTTTTTGCACTTT TTGAAGCTCAATGTCTCGAGTTAGGTAGAGAAATCATATATACTCGCAAT ATATCTCTAATCTTAATTTTTTAAGAGCTTTCCAAAAATATACAACATGT TTCTCTTTTCTCAAGCTCAAAGCAAGACACCAAAGTGTCTGAAAAAAATT GGCACCTTTTATATGTCATTTTGATTCCCCTACCCCTTAGACTTCCAAAA ATGTATAACAAGTGCTTTGACTAAAAAAGTCGAGTGACCTCCAAAAATCG AACAAATTCCCCCCTACTACTATGTTATTTGGGTAAACTGGATCGAAACA AAGCAAAGTTTTCTGTCATCATTCTTCAGAAATGTCAAAAAGAATTTAAG TCGATTACGACAAAAACGAAACTGTTCTGTTTGAAGTATAAAAGTAACGT GAATATCGATATTCAGTTTTTTCATTACTTTCTAGCTCTCAGAAATGAAG ACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTCGGCAAATT ACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGAACACCCC TTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgaggtatttttttct tttgataaattGAAGGAATTGACTCCCCCGTCTTCATTGTCATGNAGAAA TGGACACTGTAACTGCCGAAGTAAGTTGTACTTGGTTGACTGCCAACAGA AAGAAACTCTCTATAGTAGGGggggaatttgtaaaatcgctcgacttttt tagtcaaagcacttatACATTATTGGAAAGGTAAGatgtaggggaatcaa aataacataggttccaattttttttcgtacactttggtgtgtttttcaga taaatatgacggtctcaggcaaaagtcatagggtcaaaatttaatgaaaa ttttagcttcagaaaagagagacctgttgtatatttttggaaagctctca aaaatagtgtgtttttttttcaaccagaaatagcttttttgtccactttt tgcactttttgaagctcaatgtCTCGAGTTAGGTAGAGAAATCAtatata ctcgcaatatatctctaatcttaattttttaagagctttccaaaaatata caacatgtTTCTCTTTTCTCAAGCTCAAAGCAAGACACCaaagtgtctga aaaaaattggcaccttttatatgtcattttgattcccctaccccttagac ttccaaaaatgtataacaagtgctttgactaaaaaagtcgagtgACCTCC AAAAATCGAACAAATTCCCCCCTACTACTATGTTATTTGGGTAAACTGGA TCGAAACAAAGCAAAGTTTTCTGTCATCATTCTTCAGAAATGTCAAAAAG AATTTAAGTCGATTACGACAAAAACGAAACTGTTCTGTTTGAAGTATAAA AGTAACGTGAATATCGATATTCAGTTTTTTCATTACTTTCTAGCTCTCAG AAATGAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTC GGCAAATTACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGG AACACCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgaggtat ttttttcttttgataaattGAAGGAATTGACTCCCCCGTCTTCATTGTCA TGTTACTTTTGATTgacttttctttcatttcgcggaAATTAAAGTAGCGC TGTGTCAATTATTCGAATCGACTATTTTGATCGTAAAGCACGTGCACACT CAGGAAAATGGTTTTTTAAAGCACGATAATGAAGGAATTAGATAATCACG TATCCGTTTCCATTTGTCGGACGTTTTGTTGTCCTCTCATGCTATCGTCT CATATCCGATtaataaaccttactccataactcgaagttTCCTTGATTCG AGCAGTTTTGTGTTCCTCGTGGGTGCCCGAGTTATGGAAACTCGACTGAG AAAGATAAAGgtcttagaaaaaaataaatgcgAAGTTTATTATATCGGCC GTTCAAATTTAGTAACCTCACTAGTTTTGTAGCTAGATGGACTCGAACGT TACAAAAGTCAGCGTAGTTTAGAATGCAATTTCCCTTCGTCAAATACTTC TTTGAACATTTTAGGATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCA GAATATATCGATGGAGGTGAACCTGAAGAATTCTAAATCGCATCCCTCGT TCGTACACATCACACACAAAAAAGTTGATCCGAATATTATTTTATTGGTT TTCTAAAAGATTCCGGGTTCAACTAATTGTTGTTGACGTTAAAAGACATT TTGAAAACGTTCTGTCTTGGGGACTGTTGTTCAACATGCATTAGTTGAAC TGTGTGTGTGTTTCAAAGAAATGTACATATGTTGTTTTACTGTTATGGTG ACTTACATCAAACATTCATTCTGTTGAAGTATATGCATccaagaaaaaaa tgacaaaagaatttACGCCGGGATATACCGATACAAAATAAAGTATAAAG CAAGAATAAATTAATTTAAAGGAAATGAACTTTTTAAAGCAATATGACTA TTATAGACCACTTTTTAggctcattttcaaatttctccgCCAACCTTTTC CTGTCTTGTGTATTCATTTCTATAGACAATTACTGGGATAGATCTCCATA CCACAACAGACACACTAGCTACACTTTTGTTTTAGTGAAAGTAAAATAGC TCCTAAGGACGTTAGAATTTTCTAATCACGTtacatttgtttttgttttt atagttAGCCATATTTTACCTTATTGATAATTTCTTAGGTcttttttgaa acaaatttcTGTATAATTATGTTGATAGCAGaatatttaaaattgaaaac acGAAAAAATTGTGCATGTCtgagaagttctttttcaaaccGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069758TCONS_00069758Clytia hemisphaericatranscript
TCONS_00069759TCONS_00069759Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069759-proteinTCONS_00069759-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_507supercontigscaffold_507:131262..141755 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MAPRE3microtubule-associated protein RP/EB family member 3 Homo Sapiens
MAPRE1microtubule-associated protein RP/EB family member 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
481.36 469.25 773.47 852.47 152.76 110.34 206.46 219.91 183.78 204.94 147.96 101.14 143.76 126.84 151.77 202.09 215.23 214.41 74.75 91.05 179.99 188.37 224.8 213.44 249.25 266.55 175.75 136.58 150.34 144.06