XLOC_043524 (gene) - C. hemisphaerica

Overview
NameXLOC_043524
Unique NameXLOC_043524
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:194493..202958+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043524 ID=XLOC_043524|Name=XLOC_043524|organism=Clytia hemisphaerica|type=gene|length=8466bp|location=Sequence derived from alignment at scaffold_511:194493..202958+ (Clytia hemisphaerica)
CTCAACTCTAATATCAACACAGTGGAAGAATTCGTCGATCATTTAACCTT CTTATCACGACTCTCAGATGATATTCCCAAActtgaaattaaatacacgG AGATTATCAAACTTTTCAATGCAGCCTTCCATTATAAAGCTATATTAACG GAAGAGGAAAAAGCGCTTTACAAAACGTTGGGCCCTTGTTTCCACCAATT AAAGGTAAAAGATGAATTATATAGAAAtgcattattattattgttttcaT GTGGTTTTTGTGACAAGTTTTTACCTGAAACATGTGGCtttgattttaaa gttttgatcAACTCCTCATCTTTCATCCAAATAGCTCTAACACTTTTTCT TGACTGGTTTTTGTaaaactgcaaaaaaaaaaccagGCAAACTCTTGTGC CAATGTACATATACAGTAAAATGCAACGACATttcaatctttcaaaatct ATGAACTAGTAACAGATTTCGATCAAATGTTTGCTTGTGTTTgcttagat tttttttctctaaattttgtGTCGGTCTACAAATTCGGTGTTTGTAAGGG GCCTTTCAACGAACTCTTTTCATTACAGTCGTTGGTGATGTATTGTGAAG CGAAGAAAGATTCCAAGATCCAATCATTCTCTGAAGAGCTAGACACAATA ATCGAAGGCTTCAGTCGAAAACTTCACCAATTGGCCAATCAAATACGTAA TCCTTCTCTCCTTGAGTATGATCCATCCTATGACGTCATGGAAACTATTG TCTTCTTAAAGGAAGATCTTCAACAGTTGTCAGATAAAGCTAAGAGTTTT GCTAATTACGAAGAATCTTTTTCATCTGCGTTGTCAGCATCCAAGAACAA ACTATTAGAACCTATGTAAGTTTTATAAATTATTAGACTAACTTCATCGT GTTCAGATCCTAAGTGCCGCAAAGttgattttaaaaaatgatgtcggatg cttttttttaacttatttttgaTTTGAACAAGATTTTTCATATGTATAAT AACAACTACGTTGGGGTCAACACTTTTCTCGAATGGTCTAGAAGGCTTTG TTTTTATGGGAATCTTTCTACCCTTAGTGCAGGTTTTTGTGTAGTAAACT TTCCCCGTATCTTTTCAGTCATTCAATCTTCAACCCTAAACCAGTTTCGA AAGTTGTCGATCTACAAAACGATCTGAGTATTGTGGAAAAGGACTTGATG TTACGCCAGTTACTATGGCAATCTTTAAACGAATGGGACCAATTACATCA GAAATGGATCGAAACAGCTTTCAATTTCCTGGATGTTAATTTGTTACAGA AAGAAGTCACTCGGTTCGTTCAAACCATCTACCTCATGGAGAAAGGTACT AATATTCTCAATAAGATTCTTTGCTGTCCCTTAAAAATTAATTGTTGAGC TTTCGAATAATCTTTTCACTATCGGTTGGATAATAAAACCAACAACGACT TTTCAAAGTGAAACCGATTAGCTGTAAAGGAGGTATAAATCATGTTATTT CAGATTAAGCTATCACGTAATGGTATCTGACTGACCAAGGAAgttctata aaaatatttttataggACTTCCATTTTTATAGGACTTCCTTGGACtgagg ctggacttaaaaaattgttaatttgccgtcacccgaccgaccctacctcg aaacctgccgacccaaaaaaatttattgccattttaaagaagaaattttt ttcttcaaaaatttcaaacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctgtctcaagcataaaaatt GTGAATTCCCTGCTAGCGCTCTTCTgttttccattcaaaattacctaaat gtaaacaaactgttaatcCTTCCATGGACggaaatttcataaatcgtcaa aataaaaagaatttccgaccgaccgacccacctccaaaatctagggtcgg gtgacggcaaaccaacaattttttaagtccagcctgaGTCACCTGCTCCT TTTCTgttcctttttcatttttttttaaatatatatatGATAAATAGTTA CTTAcccaaaaagtgaaatatgCTCTTCTTGAGGAGAATACCACGTAAAT CTCGTgctccaagccacgataaacttccaatatgctCTTCTTCTTCCCTG TTTTTTAGGACTGCCACCGAACCAACTTGTGCCGAGCCTGAAAACGAAAG TTCACTTGTTCAAGTATGCAATGCCGGTTGTAATCAGTTTGAGAAATCCT GCTTTGAAAAGTCGTCATTGGGATGAGATCACGTGCCTGATCGGTGTCGT CATCAAAGGTGACAAATATTTGACGCTCGGTCGCTTGTTGGATCTCCAAA TGTTCGCATACAAAGATCGCATTTCTGAAATCTCTTCACAAGCAAGCAAC GAACAAACGCTTGAACAAATGCTACAAAAAGTgatcgatttttggaaaaa aactgaTTTAGAGTTGTTGGCTCATTCGAGTCGTGATGTGGCCATAATAT CTGGTATTGATGAGATCATATCAATGTTGGATGATAGTATGGTGACTATT TCGAACATCAGAGGTTCAAGATTCCATCTTTTTCTACAGGTACGTGCGAT GATTCAAAAACGTTTTCAAATTCATCCTTGATCTAGGTCATTTTGAGGTC ACGATGAATGGCGGTTGCAATGAATCATGGGTAGTGATGGATGAGTCTTC TCACACCCAATAACGGATTTCTTTTGGTAAAACTCAGAAATGCGGAATTC AAACGGAAAAAGACCTAAGGGGACTAATATCCATTGAGTAAAGAACAGGA ATATTTCTTATGTCAAAGAATGACTCTAGTTAACAATATTTTAACCATTA GgaaagaaatatcttttcatttttttgtcttAGGCACAAGTGAACGAATG GGAACGCAAACTGAATTTATTTTCGCGTACTTTTGAAGAATGGGTGTCTG TGCAAAGGAATTGGTTGTATCTAGAAACTGTTTTCTCAGCACAGGACATT CAAAGGTAACTTTTGCATTTCCATTACGTATTTTCCGTCATTAAGGTAGC AGACGTTCGGTTTGCGTAAGGGGTCGCCTCTATGGATTCGAACGTTTGTT ACCTCTCTTGTACCCTATACTAGACATCAGCCGCGTTTTCTCTATGCGAC TTTTCCAAATGTTTTGAGCCCTGGTTTTCGGGCGCttaacattcgatttt tttatatcactttaaacttttgaagctcCTACAGTAGCAAAAAgaacttg aaaggcttctatttttcgaaaatcatcaaagtgaaactcactaagaaacg gaaTGAGAAATCCCGGgttttagctctagtttagacggcccatttttcgc cctgcctattctaattgtgaattaaagttggcaatgcaatgacttcttgg CTTCTTGcaatcttttccaagcaaatGTTTTAACTGCCGACTTTGTGCCG ACTTtgtgcctactctaacaattagaataggcagggcagaaagtcggccg tctaaactagagcttagtgAGGTACCTCTACGGTACGCTACCTCTTTTGC GTTATTAGCCTAGCAGAATATCCACAACGGCTTTTATTTTATGCATACTG TTGAAATGTGTAAAAGCTTTATACGATGTTAAAAAACGGTTTCATCTCTA TTCacataaaaatttaaacataatTTTCAATTAGACAATTACCACAAGAA GCCAAACTGTTCGCACAAGTTGATAAGAACTGGCGTGACATTATGCGGCG AACCATCGATAAACCAAACGCTCTACAAGCTGCAACTTCGTCAGGTTTAT TGGAGGTTCTTCAAGGATGCAGCTCAACGCTGGAGAAAATTCACCATTCA CTCGaggtaagtaagtaagtctgcgaccgcagtcggaggcgacccgaacg ctcctttttcgatagctatctacccgaaggcaaaggagggtgccactctt tctccctgggttgttccacttacccttgatccttctctttatctctgagc attaagcagagaggcatcaggtaccattttgagaatctttggtatgatcc ggctggggattgaacccacaacttTGTGAACGGTagacggatgctctacc actacaCCACGGTTCGCTTACTCGAAGTAAATtgtgaaccaaaagaaaaa aatcttgtcGATGAAAATAACATATAGGAGTCAACATCTGCGTCATCAAA AAGTATTTAACACTTAACAATATTTAACTctttaagtcaattttcaagGA GATTTAGATTctcatcgaataagagagcttatcaaatagtagagcgtcgt tcacgagagtttcttgttgacgtcGACTTTCAATATCCTCGAACAATGGA GTATATCGATTTCTAAACCAAAACCTCtcttaaaactttcaaatatcttt ccaacgcaGGATTATCTGGAAACGAAACGCTTGGTGTTTTCGCGCTTCTA TTTTTTGAGTAATGACGAACTTTTGGACATTCTTGCCAACAGTAAGAACG TTAAACAAGTGCAAGTCTACCTTCCCAAATGTTTCTTCAATGTAAATCGG TTGAAGTTTGGTATGACGCAAAGAGCACCTGTTCCCATCTGTGGTATGAT ATCAGAAGAAGGCGAATACATGGAACTGACCAAGTATGTATCTTGAacac tttaaaagttttgtttttacataagtgttcccgtttcatatcaggcacat atttcatatcggggcagtgtctgtctattgttataCTATGCCGATATAAG caggaaaatgtttttcttttcctctttctgaccaatcttgctccacatcc gtatcaatccaatgtgaaaaagcttgtgaattaaaagtgatgagtaagca aacgatatcacacttatttaaaaacaaaacctttaaacacAACtacatat tttcttttttataagcaacttcaATTTTCAGGTCATGTCTGGGGTTGCTT ACTATTCTTGCTCATTTTCTCGACTTTTGGATCTTTTTTGTAGAATCTAT CAAACAGAAAAAATGCATAGAGGCTTTTAGTTGTCAAAAGCGGGACACAG GCGCCATGGAAAGATCCAATTAAAAAGTCTTACATTGAAAGATCTGATTT TCTCTTGGGGGAAAACTACACACACCTTTCTTTTTTCATCTGTTTAAAGT TAGAAGATTTTTAGTCAAATAGTAAAGATTTTGTATCCATTTTATGCATT TACAGGTCATTGAAAGCACGTGGGCAAGTCGAACAATGGTTGACCAACGT TGAATCCGCCATGTTCGATTCTGTTCGAAACCATCTCAAGAAAAGTCTTC CTGAGCTGCACCGAACAGACTTCATGAAATGGATCTATCAGCAACACGGC CAGATTGTGCTGACATCAGCACAAATCACATTTACGAGTGAAGTCGAAAC CATTCTACGTCATTCTCCTCAAACCAATAGCAATGACAATCAATCGCTCT CAGATATTGGGCATGGTTTAAAGAGGAAGTTGGACCGCCTTGCTACGGTC GTGTTAACAGAGTCTTCACTGAATAAACGCAACGTCATCATATCTCTGAT GATTTTGTTGGTTCACGAAAGAGACACTGTCAAGAACTTGATCGCACAAA ACGTCAATGAACACAATgatttccaatggaataggtaCGCAGTTGTTATT AAATTTCCATCAAATCCTAAATTACAGAAAGAACTTTTCACGCATCATTT GCTCGAGGACCAGAAAATATGATCTGATTCTCTTGATTATAGTTTTTTTT ACACAGTGAAAAGACTTTTAATTTTCCTAGTGCCATCTGCCAATACTCAC ATTCAAAAGAAAGTAGCATCAAGTCTAAATTTCAAATGAAGGTCTTTTTT AATCTTAATTCTTCAGGCAACTACGTTATTATTGGGACGACAAACAAAAC AATTGTtttatcaaccaatcaatcGCTTCTTTTACTTACGGTTACGAATA CCTTGGCTGTACTTCAAGACTTGTTATCACGCCTTTAACCGATCGATGTT TCCTCACCTTAACAGGCGCCATGCATTTTCATTTGGGCGGTGCGCCCACA GGTCCTGCGGGTACTGGAAAATCTGAAAGCGTCAAAGATCTAGCTAAGGC GTTGGGAAAACAATGTATAGTTTTCAACTGCTCCGAAGATATGGGCTTCA AAGTTATGGGCCGTTTGTTATCGGGCCTCGCTCAGTCAGGTTCATGGTGT TGTCTCGATGAGTTCAATCGTATCGATCGTGAGGTGTTATCCGTGGTTGC ACAACAAATGCATATTTTACGGACCGCCAAATTGAACAAGTCAGTTCGAT TCATGTTCGAAGGACGAGATATTAGACTGAACCCCACGTGTGGAGTTTTT ATTACGATGAATCCAGGCTACGCCGGTCGTCAAGAGTTACCAGATAATTT GAAATCACTGTTCCGGCCTGTTTCCATGGTGATACCGGATAATACTTTAA TTGCGGAGATTTGTCTGTTGTCTAATGGCTTCACTGCAGCCATGAAGTTG TCCAATAAATTGGTCAATATCTACGAATTATGCAAGAGACAACTCTCTAA GCAGGTAATCAATGAACTTCTTGGTCAaattccactttcgatttttaAGT TTTCAGATTGTTATGAAAAGAAGGTCACGTTAAACTTAGTTCAATGGCaa gtaccgtattacttcgaatgaacgcccggggcgtttatttaatttcttCG ATTTCAGGAGGGGCGtctattcgagggggcgtttaaaagaagggggcgtt tattaaattatttgagTCTAATGTCGAGTATTTAGTGCAAATCTACTCTT TGTTTTAGTTCTATACCAGGATTTCAGTGCAAATTTCTTTGGGTCAGCGA CTAAAATTGCATTAAAACTGATCTGGTTGCAAAAAagactaaaatcttcc ttttcaatcATAATCAAAACTTGTATCAAAGTATCtaagtcacaagtttc taataagaaaggggtgtttatttgaggggggcgtttgttaaataattttc ctttcaggaggggcgtttattcgagggggcttttaaaagaagggggcgtt tattcgaagtaatacggtatattTGAATCTAAGCGGTCCAAACCGGCTAA AAGGCAACACCTTTGATACAATCCGAAATATCTCTCCCAACCATTTCAAA CCGATAGTTTTTAATCCTCTTTCTTGAAAATAAtgctttttaaacaaaat tcctTTCTGTGCCCGCTCCcaacaaaacaataaatactGCAGTGTGATAA ACAGTGAATTGTGAACTTATATTTTTTCAGGATCATTATGACTTTGGTTT ACGAGCCATCAAAGCTGTTCTCATAATGGCCGGTGAAAAGAATCGAAGTC GTAAGACGTATgtatccataacttttaatggtTCCGAAATTTTGTatttg aaatttgatatttagATTTTGGGCCGTTAAAAATTATTCCCGGATGCACG GATTCAACAGATGTAACGCCTCCCCTTCCAACACCTAAGCAATATATTAT TTTCCAGAAGTAATCTAGTAGCTACCATTATGTAACTCTAATCTTTGTTG ATTTCTAGTGGCAGTCTTTCATCAATTGAAGAGCGTATTTTGAAGCAAGC TATCCAAGATTCCATTCAACCGAAACTGATCACGGATGATCTGAAGATTT TTCAACAATTATTTCATGACGCCTTCCCTACCAACGATGTCAATGAGCAA GAACCATGTCTCATCGAggtatataagaacaaagtgtATTCTATAAGAGG ATTCTAAGACTAATTCAAGGCCTTTTATTCCTCCTACGTCCTAGAGACTC TACAATCAgttccaaaatacttggcacaaaagggaaattccccatgaaat tttataaccacaagAGATTTGTAAAAGCTCCAAATTAGTTTGCAaatgta gagttttaactctgagttttaacgctagacttattCGATCCGAAATTGAC ATcttcgctcgaacttcaattttcgaaaaatggtaaagtagccaaaattg ccaatatgttatggcacccATTGtagcagactctaaaacatGTAATCTTT aggaaatttaagaacatccgacTTTTGACGTGTAAGATCTCAAAACGATT CCTTTTTCAAATTCCCGTCATTTTCTTTATACCATAGAAAGCCATTGGTA TCGCATTACGTGAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069886TCONS_00069886Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069886-proteinTCONS_00069886-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:194493..202958 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51 0.41 0.62 0.15 9.14 5.92 1.77 2.36 1.36 1.29 1.25 1.95 0.3 0.42 0.06 0.13 0.08 0.13 0.24 0.29 0.27 0.27 0.19 0.31 6.82 5.22 0.21 0.11 0.1 0.08