XLOC_043531 (gene) - C. hemisphaerica

Overview
NameXLOC_043531
Unique NameXLOC_043531
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:328660..340051+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043531 ID=XLOC_043531|Name=XLOC_043531|organism=Clytia hemisphaerica|type=gene|length=11392bp|location=Sequence derived from alignment at scaffold_511:328660..340051+ (Clytia hemisphaerica)
CACTCTCAGacataattgaaaaaaaacattggaCAAAAATCCATTTAAAC CTGCTGTTCTTGTAGTACAAACTCACAGTTTGctttgaaaatacatttta atAGAGAGTCCTCGACATCAGGTTCATAAGACATTCAAAAGAGGTCCAGG TAGTATAGCTCCCTGATGTGATGGCAGTGACCTCCTAAACACCGACCTCG ATCACTAAGGGAACTATATACATTTTCTTGTTATAATTTCGATACTaaat aagtttttcttttgatatcgTTATTTTTTCTCTTCAACATGTGAATATTT GTACAAAATCTTTCTGGTAAGTCAAATCTAACAAAGACTTGTTAAACATT TTCTCTTGAAATTGTTCCATatcagtttttatttctttgaagattttgtt caaacacacgaaaaataaatttttcatctttaatttcattttgatgGGTG TTTGGTTAAGTAACATCTAAAATTCATTAATTTGCGTTTCAGGAAGAAAA TGATGAATGTATGACAATGTGTTTGAGGTGAAATCAAGAGcttcaatttc aacaatctgGACCAAGGTATAAACGGAATcctaaaacacccctgtctctg tgctTCAGTCAGGGGGGTCGGTATACTTAAATTCTCAAACATACATGAAT ACTAAAAGGATACTACCACTACcccatttttgaaaagtggtattTTATTT AGTACCCATGTACTGAAATGTTTAGGGACATTTCGAGACAGAGAACACCC AATCTTGGTCTTTTCAGGACAACTTTTGTCTTCTCGGGACCGTTTTTCTC AAGAGTTCTGATCTTACCAGTATTGCAAAAAATCACGAACAGCTCAGAAA AAGAGTGAGTTAAAAAATCTCACATTTTAGTTTGGATTCCgccttttttg gtattttagtaccccattttactaaaaggatttttaagtTTCTGGGTATA CAACCACGTCACTAAACTAAATCTAGGATAGATTTAAGTACCGACCTCCC CCTGCTATAGTGGTTATCGATAGCCTAGAGGGTTGGATTAAAAAGAAGAG ATTCTATTTTAGCGACCCTCTAAAAATTCTACTTCGTTTTAGagttaccg tattacttcgaataaataTATTATTTAAGGAGGGGTTTTTATTCtagggg ggcgtttattaagtGATTTATAACCAAGGTCACTTTAATAAAGTGAATGG GAACCCGTTTTGCCTTCGGATTATTGTTtgagcatagtataagaaagccc cGGCTGTCTTCGAgttctataagaacatcaatTTTGCTAGTTTATTCTTG GTTGGTAGttttgtgaatttttctctCATTTCCTTCAGAACAAGTTTTTG AATTTAGATACCTTTGAATATTGGCCCAATAAATCACTATGAACTATTTT TGGAGATATATCATATTANgcatagtataagaaagccgcggctgtcTTCG AgttctataagaacatcaatTTTGCTAGTTTATTCTTGGTTGGTAGtttt gtgaatttttctcttatttcctTCAGAACAAGTTTTTGAATTTAGATACC TTTGAATCTGGGCCCAATAAATCACTATGAACTATTTTTGGAGATATATT ACTATTAGGGGTATTTTGAGGAAATAATACTTTTTAgccaaaattcaaat tataaaaactaaattcaaaatgagaactttcctgtcagtttaaatgatTA ATTTGGAAATTGccagcttgaaattttcacagtattgtctttgatgtact ttttcattggtttctcaaaatatttcattaaaatattgtgaaggcattcg aggcacttgattacttttttagtttttcagcCCAACCATTTTGTGCTTGT GCTTATATTACTTATTGTTGATATTTCATTTATAATGATTATATGATACA AGTGTATTTTCACAAAGGCATACCATTACTTTCTAAAACGCAGTGAGAAA TAGTTATTAACGATAAATCAATAAAACTTACCACAacaattcagatgtta tcattccagccgtgGCTTTATACAATACtcttatactatggtttgaGTAT AAATAGCTCAACTTAGAGATCAAAATTACTAAAAGAATACATATTATTAT CATATATCTAAGTTTTCCTTCATATCATACTTCCTTACAGCTACTTGTTT CAAATCACATTCCCTCCTAAGGGGAGGCGTTTATtagaaggggcgtttat tataAATCTTTTCTCAAAGGAGGGGCATTTAAAagaaaggggcgtttatt cgaggtaATACTGGAGTCAGTTCCTCAAAGATTTTAGTGAGGTAAAAATT TGATGTTAGATGGATCACAAAGTATATTCCTCTATAAAAGGTCTAAAATT TAGGAATAATCTTACATCCTTAATTGAAATATCCCTCAAAACAGTACCTT GCTTTTCTTTTTAGGAATAAAATCTGGAATATGGATGGATCAGAAATCTC AAGTGACGAACCAAAGAAAAATGGATTTCGTTACATTTGTGAACCAGTCT TATTTCTCTACTCATTCGCATACATGTTGCAATTCCCAACAGCACATCAG TATATTTACAGTCGGTTCAGCGAGAACATAGGCTTCAAATATTCCTATAA TAATCCACATGCTGGGATATCGAGAGAATGTCACCATGGCTCGATGAACC AGACTGATATACACGCTCAACAAAAGGTtcgttacatgttttttttttta taagcatatgttttTTGGGAAACAAGCTCAATTATGCTTAGAGATATTTT AGACTCAGACTCGAAGTATGTTtatcatatgcttatttttccgaaaaatt cgagtctccaatttttccaaaatctgtcgTTGCTATACATGAGGATAGGG AAATAGGTAATGACACAAAGATTTTTCAGGAAAGTTGTGAACGATTGCCG CGTTTATAATTTTCACTTACACGCCTCAAAAGCAAGCTCAgtaatatgct tgtaatatgcttattttttagacaaattcaggtgtcggtatgcttataaa cgtaatgcttataaaaaaacatgtattatcTTTCACGAATCACTTTAGCC ATCTCACGTAATTTCGCAagatttatttttgtgaaaaaggcaATAGTTTG CGAAACCGGGAAATGTGAAATTAATCtgaactagccggtacccgacATTG CACACCGGTTAAGCtttagctgaacgcactaaaagtccctTGGATTTGAA AACACGTAAAGCAAAGGAAAAGAGAAAAACGAAGTGGCGGGCAAGCCAAG GCAAAAATTAAATTGCTAAATGTACGGGCctttaatttcaaaagaaaGGC TGAATGAAGTCTGAAGGAAGTCTGAACCAGGCTCTATGAATCACAACAAA GCTTAGAACACATTGGTGGGGCAAGCTTAAAACTGCTTGTAAGAAACGAA AGTTACACGcagaaaacaaaatgacatatAGACTACCGCTATATAGATAA GGTatgatcactgacctttatataccctggaccaagcttctcaatcccag ccaagcaaaatcctTGATCGGAGTTTtgtgaaaattggtaccctaatgtc ggcactactcgatagcggtgtaattgcatcgagagcgctaggtctacttt tcctcaaattcttttgatgatgtagcggcgttagacgttaatttttaaca ttgcaatggcttctccttgggtaccaattctaaaaaaactccaatcaaag atggcagatattgTTTGGTCCAGGGTTATATAAAGGTCAGTGGGTATGAT CTGTCTTCACACAATCAATTTGGCCTCACAGCAAGGTATTCATCAATGGC CTTGTGTGACGAGGagtcaataaaaaatgaacATCACACTGATAAATGTT CTCGCTAGTAAAcaatcacaggaaaaaattttcgttttcttagttggaaa aaagataaaatccaatggaaaatccaacctgaaaatgtgggacattctcc aaggttggaaattttgcattttccatggcttggaattttcgtaaatccag gttgaaaaaagcaaaattaacaaggttgcaattttttaaaattcagttgg aaaaaagccaaaatccaagcttaaacaaggttggaattctcgaaaatcga ggttgaaaaaaaacaaaatccaaatttaacaaggttggaattttcaaaaa tctaggttgaaaaaagccaaaatacaACGtggttggaaatttcgaaaatc caggTGGAAGAAAGCCGAaatacaaggttggaatttttgtaaattcagtt ggaaaaaagccaaaatccaagctaaacaaggttgaaaaaagccaaaatcc aaaaagtcatggcagagatgtggaaaataGATCTTAAAcaagatttttgt ttttgtgaacagtcactcgctagcctaggctcgatggctcccggtcaata tctcgttattgttcgcacagatacgtggttgatcttagatcactcacaca gctcagcagggtactatttgaaactatgacacaagtaccctaagtgcttc actgtgcgaacgcactgcgattgaccgaggccgctccgaagagaagcctc acctgacggaaacttacagcttgactgctcacattgtagcctaatatcta ggttagctatacatcaaaacagttttgagcgaaaaatcgctagtggtttt cccaaggacatgcgcagaaaatggttggaaaaacgtaatttccacatgaa tttttaacgttttccaaactgtttggaaaaacacaaatttccaacccaaa aagtctagttttccaatcgaaagagtttcaatttcacaaaaatgtaattt ccacatggatttttaacgttttccaaactgtttggagaaacacaaatttc caacccaaaaagtctagttttccaatcgaaagagtttcaatttcacaaaa atgtaatttccacatggatttttaacgttttccaaactgtttggagaaac acaaatttccaacccaaaaagtctagttttccaagaaagggtttcaatct tagaaaaatgtaatttccacatggattttgaacgttttccaaactgtttg ggagaaacacaaatttccgacccaaaaagtctagtttttcaacttgaggt atcaaatttactaaaatatgtattttcacatcgatttNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGGATAAAAACG CACGTATTAATCTTGACCCTCTCATGTACTAGAACAAGTTTACTCGAATT ACTcacaattttctttaaaaatgaaaaatcccaaaatttaGGTGAAAAAT TACCCAAATTTAATTGTTCGAGTTTAAGTAGCTCGATTATAAAAATCTAA ATTGTCTCTTCTACAGGTGCAATCAGCGACGGCTCATTTCCAAATCTACT ATCACATTATGAGTATCATACCATCAACCATCATGAACCTTTTCTACGGC GCTCTCTCCGACGAAGTTGGACGTCGCTGCATGATGACGGTAGTTCTCAT CTGTTCTGTCATCGAATCGTCTATTCTTTTAGTCAACATCGTGTTTAAGC TACCATTATGGACGATCTTTATTGGGAACGCATGTGCAGGTTTCGGAGGT GGACTGAATGGAATGTTTATGTTGATCATTGCTTACACTGCCGACGTTAC TGAGAAAATGGACAGGTCTGTCCGAATTGGTAAGCTTGTTAATCTAGTCT GTCTTCACACACCTGTTATTAGCTTATAAATATATACCGGTATGGTCTAG TCTGGCATGCTAGGTCACTAAATTATGAGTGAGAGGAAGGTTAAGTAAAG GAGATCTTGAGGACACTCTTGTAGTTAATGTAAACCAATATTATCACATA ACAGTTAtggtattatcatataacacctataTTACTGTATAAGACGTACT ATAAATAACTCCACTCTATAAATCACCAAGCATTCGAGGCCCAGATTCTG TGCCAATGTATTACTTTCTTCTACTTTCTGAGCAAATTCATTCTGTTATG AATGGTGGTATCGAAAATAGATTGACACCCTTCATTTTGAGGCCGGCGGC ATTAAGTTAGATTCATGTATTTTAACCAACTGCTAAAAAGGATTTGCAAA TGGAATGAAATGTATTGTTATTTCAGGTTACATAGAGGCTGCATTATTCC TTGGTATGACAATAAGTAATTACGCCAGTGGAGAATTGATTCACCAATAT GGTTTCACTATACCACAAGTTGTCACTGTTCTTTCGCATCTGTCCGCCAT CTTGTATGTCGCCTTTGTCCTCAAGaaatcacgtgatcaaaacaaaCCGA GAAACGAGACGAACAAATTGCTTATCTTTTGGCAACAACCGATTAACATG TGGAACATTTTAGTTAAAGAACGTGCAAACAAGGACTTGTTATATCTagc catctttattttgatcAGTGGCCTAACTTTCACTGTTAGTGTTCATTCCG TGTTCACACTGTATTTGTTAAATCGTCCATTTTGTTGGCTGGCCAGAGAC GTTGGTTACATCATGGGAACCTATTTTCTTCTCCTTTCCTTGGGAACAGC TATTGGAATGAAGATTTTAACACCAACCATACCTGAATGGCTTTTATCTC TGCTCAGTTTCATGATGTCGGCTGGAAGCTTTCTTTATATCGCATTTGCA ACCAATAAATTGGATTTATATGCAGGTGAGATATTGTTTTgctttgtttc ttcttcttccaatTATACTCAGTTAATCTGTGGTTACTGCCTTTCATATT AAGGTGTCTTATGTATTCAGTATATGGTTCCATACCTTCCAATTAAAGGG TTCTTTCAATCTCAAATGTTGAAGCATCCTccattttaaaaacctttact aTTCCGTCAGCGCAATAAGATAGCCTTCGTTTCGCTAATTTGATTTCGAT CTAGGAGTCTTGAAAGGAGGCTTCAAGTTCCCAAGAAGAGCACTTGTCCG ACCAGGATCAAATACTCTGTTAACAATTTTCCCTTCCTTTTGACAGCAAT TGCGCTACGATTTTTCGGTGGTTTACCGACAGCCATCTTTCGTGGAAATG TTTCGAAGAGTGTCCCTCAAAACGAGCATGGTCAGTATAATAAGATGAGC TCCATCCTGAAATTGCTTTTCCAACTATTTCCTGGCTATTGTTTacaatg aaaataattaaacaataattggctttaaattctACAACATAATTTCTCCG CAGTGGGTTTAAACGGCGATAAGAATACCTAATCGCTGCATAATGAATTT ATGGTAGATCTTTACTTAATATTAAAATTCTATATTCTTTCCCGATTTTC CAGGAGCCATCTTTTCGGTCATCACATCCATAGAAATGCTACTCATCATG TtgggaattttcattttcaatacaTCATACGCACATTTGAATGATATTGG ACATCCCGGATGGTTTTTCCTTATACCGGCCATAATGCTTATTATACCGT TTACTTTATCTGTGTAAGTTActtgtgtttttataaaaccAGCACCCTTT GGATGAGGCttagttgtttttattttttcctgatttttagaCTTTCATAT TCTTTTAAAATGCTCTTTATATGCTTAAGTACTTTATAGGGCTTATAATC AAGATTGATGAAATCTGTTCTTAGGTCTGGGTTAAAATTGAGCCTTAATC AATCCTCTTAATCAATCTAAAATCAGACGTGAACTTGATCTGTTTTGTAG GGTTTATTGGAAGAAAACGTTCGATTTACAAAggaaacatttttatgacg tcactaTTAGTGAAGAAGACgaggaagaagaaaaagaacaacttttgaaa gaataaacTCTGTGGAGAAGTGTTGAAAATGCTTTATCCTTATATGTTAC TGTTTCTGTTAGAAATATCACCCCTTCGCGGTGTCCTTAAATGAGCTTAT ATTTTGAAGGGCTGGCCCTTCATgcccctaaaattgaaattattagttgg cttaaaaatagtttttattttatttatggaaaattgttattttatctttt gtattttaaaattgtACATGAAAAATTCAGGGGGTAGTAAAAATCGTGGA GAAAATGTGCATCTTATAACAGCCAAGAATATCACCTTCACCGGCAGTTG TTGAATCGGCATTCATGAcatgttttaataaaaatttcccaaaatgccGT TTTTTTGTCAAACGAATGAAGAGGTAGTGGTATTCCTGGCAAATCTCGCA ATTCTGTCTGTCAATCGAAAGGGCTgtaagattttattttatttatttat tctttatttaaagtTGGGTACTAAAAATCTAGATTTTACAAATGAATATA AAGTCTAATTAAATCCAACTTAGTAAAAAAANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTAAAGTTTAAAAACACATTTAAAAGTAGAGTCAACC ATATTTCTAAATGCAACCTTTACAGGTGCATATAGGAGAAACAGATTTCA GAGCAGCCTTAAAAGATGTTAGTGAATCTAGGTTCTTAATATTGGATGGT AATTTGTTCCAGGTAGAGACTGCTCTGAAATCGAAAGTATTTACAGCAAA AACACTGTcatatttttcatataattGTAAAGCTAACGTATGACCAGAAC GGAGGGTATAAGCAGATTGTCCTGTATTGAAAATATCATGCATAATGCTA GGTCCGATGTGCTGGATCAACGATgtaaaataatagataaccaacttgcc ttgattctcaaaaaacatccatgttacggttgtaaaaatattaatgacat tttgcatcgtaaaaagtgcaattaaataaaaacttgcttcatttgcatcC TTCTATTGgccagaatcgatcacgtgatgtatatttttccaaaatttggg ttagaaaaagtgtattttcctataggcagcctcacagaaggaatttttta attNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttttaatta gatattattgttctataaacattcatctgtttattttgtatcaggcaacc ttcatgcacttttcattcgtgagatatcgcacttcaaatcacacacATAT TTTTCAGACAACATCATTTTATGatcgtttatttatccagatgaagatta agtggtatcaggccgatccgtagtcaatttgtctaaagattggtaccttt atcttttgaaaaaaattccaaaatttgcagtaNCGGCAAAAGATTTAAGT GATATTTCGACAATCAAACAACTGACTGTGGATGGTGGGGCGAACGGGAA TTTTTTACTTCTTCTCGGATTGGCAAAAATCTGGACCGAATGGGAAGGTC TTTCTGATTAGGTTTCATGACTTTTCTCACTATACTATTAAGCGCTTCCC AATCGGGTTCAAACTTCCCGTAACACCAGTTTCAAGAGAGATTTGATGAT TATTAAGAAAGATTGCCACAGTAAAACCTTCAAATTCTTTACCGCCTAGA GAAAGTCGTCATCGTACAACTTTGTATGAGTTTCAGTCATTTTTCGACTT CCTGATTAGGAAAAATCTTCCCAAAGGGGCAGAAAAAATCGAGATGGTGC GAGCAGTTTCCTcccaatagaccttatcggagtttctgatttttctaaaa aagcgatgcattgcgggattgtttcgagtgtattacatagaattccctcg aggaattcctaagagatttctattgtaatacactcgaaacaatcccacaa tgcatcgcttttttagaaaaatcaaaaactccggtAAGGTCTATTCGGAA GAATCTTTTCGATCAAGTTAGTGCGTAGTGGGCATAAAAGGCTTTATagc caatttttaatttttcatcattttagtTATCGAGTGCATTGATCTTAAAT TTGCATTTTAGCTCAGCATGCCCGATCCAATATAAAGTGTAAGTTTTAAT CCACATCCCTGTTACATCCTGCCAGGAAGGTGAAATAAGCTTTGAAATTA CAATTTTAATTAAAGTATACAGACCTACTTTAAttaaaattgtaatttta aAGCTTGTCACCTCCCTGACAGGGTGTAACAGGGCTGTGGATTAAAACTT ATTGAGAAATTCCAATCAGCACCCTTTGAATAAGGCTCGGCTGTTTTTAT TCTTCCTGATGTCTAGACTTtcatattctttgaaaattctctTTATATGG CTTTAAAGGGGCTTAAAATCAAGATGATTGAAATCTGTTCTTAGGTCTTG GTTAAAATTGAGCCTTAATCAAGCCTCTTAATCAATCTAAAATCAGACCT GAACTTGATCTGTTTTGTAGGGTTTATTGGaagaaaacgttcgatttgca aaggaaacatttttatgacgtcactaTTAGTGAAGAAGACgaggaagaag aaaaagaacaacttttgaaagaataaacTCTGTGGAGAAGTGTTGAAAAT GCTTTATCCTTATATGTTACTGTTTCTGTTAGAAATATCACCCCTTCGCG GTGTCCTTAAATGAGCTTATATTTTGAAGGGCTGGCCCTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069901TCONS_00069901Clytia hemisphaericatranscript
TCONS_00069902TCONS_00069902Clytia hemisphaericatranscript
TCONS_00069903TCONS_00069903Clytia hemisphaericatranscript
TCONS_00069904TCONS_00069904Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069901-proteinTCONS_00069901-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:328660..340051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58 0.5 0.21 0.07 0.1 0.1 1.5 1.52 5.15 4.67 2.06 7.37 5.41 6.14 0.83 0.92 8.9 12.04 12.26 13.6 29.35 25.47 9.69 11.3 13.65 18.79 3.8 2.94 0.15 0.29