XLOC_043723 (gene) - C. hemisphaerica

Overview
NameXLOC_043723
Unique NameXLOC_043723
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_516:89233..94943+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043723 ID=XLOC_043723|Name=XLOC_043723|organism=Clytia hemisphaerica|type=gene|length=5711bp|location=Sequence derived from alignment at scaffold_516:89233..94943+ (Clytia hemisphaerica)
CAGCTTACGTATAATCCTTGAATatttaaattcttaaaattttcttcata
ttACAAATTTTAACTTCGATGTTAAATATATCCTAAGTTTGttctgattc
ttataaaaagtaacaaattttCATTAGCTCTACAAAAACAGACTGAGTCT
TGACGTCATATTGACAAAAATCACACAAATATAAAGTTCACAGGAAAATA
GAACTTTAAATAAAAGCTCGCACTGtcatttttggctttcattcTTACAT
AAGTATTTGATAGTGATAGAGTCAAGAAAATTTATACACAGTCAAAATGC
ACTTTTCATGGGTTTTAATCGCCTGTTTGGTATTTTTGGAATTGCACCAA
AACGAGGTCGATGCTCATTGGTTTCGAAACATCAAGCGTAAGATCCGCAT
CCGGCCGAAAGTTCCCTTCGTGCGTGGTAAGTAATGCCTTGTATCATATC
CATCTCCCTTGCTTTGACCTAAAAGAATAAAGGAGAATGGGAATCCATAT
CTTAACTTATAACCTTCTCCTCCTAGGTCGAGCTGACCGTTCCTTTCTTC
TTCGATTCGGTATTCCTATTCCAACGATTAAACCATTTTTACGGCACCTC
CCTTCTAGGCTACACGCATCCCTTCGTTTGTATATGAGATCTCtctaaat
ttcattaaatctgaatcaaaattttgaatggcTCTAGGAaaatacaatca
ttggatttctgAACCTTCAAATTTGtgatttcttaaaaatttacttGTCT
TATAGGAAGTTTATGTCGCATGCGCCATCATCGAACGATAGTGGATGAGA
ACAATCGTTATGTGAAATGTGTACGCAGTTGCCCAAGTACTGGATACCAA
GAACTATATTCCGTTCGATGGGGACATTACTGTAAACCTGTCGGTCAGTT
GCCAACAATTCACTTTTGAAAGAACACTTATGCGAGGTTTTATTTACGTT
GATGAACATCATCAGTATACAGCCAAAAGCTAATAATACGCCGGGAGCGT
GTCTCATACTTAAACTGATTTTATAAATTTCATCATTATTGATAATTACT
GCCGTTAACACATTAAAGCTTGAATCGAGCTCAAGCCTTCCCATAGCTAA
AATGACATCCCTTTTAACAGAACCACAGTTTATATGAAAAGCAGGATATC
TTCAGATCTTTCTAGAAGCTTAAGCCTCCCAATGCTACCCGAAGATCTTT
TAGTAAAACAATAAGGTCTAGACCGTTCGCCTAGTGAAAGTAAGCTGATT
TACTATTCATTTTTCCTTACAGTGATTCCAAAGGGTTGTTCAGATCAATA
TTGCAACACATGCATCGCATCATATAAATGGATATTCGATGCTACCCGAT
ATCGTTCAAAATGTGTCCGGAAATGTCCGAGTGGTTATCGAGAACGCATG
CCTAGATGCGAGAGTAAGTAACTAGGAGTCTATAGTATATAGTTGTTGGA
TAGTTTGCGATCTAAAGACAGCATGGGTTATAAAGGTTTGAGTAAATCTT
AAGAGAAAACCTTACACTTTTCTTTGAAGGGCTAAAGGTCGATAGTCACA
ATACTACCTCCCCTCAAATAACTACTTGAGTTTGATCTAATTCTTAGAAT
GCTTGGTCAATAATTGCCAACGCTGCGAAAACGATTTGTGGAGATGTAGC
AAGTGTAAATGGGGTCTTGCATTACAAAGGACATACATGGGATCTACACT
CTGTCTACGAAGATGTAGTCGGggttttgagaagaaaaacGTAGATGGGG
TAGTGCGATGCTCGAGACCTATTGTACCGACACCACCTCTCCCCACAACC
GACATAACGACCGACATGTCGACAACAGAAGAGACATCAACAACAGATGT
TCCGACACAACAACCTGATACAACAAACATAATTACAAGCTCAGAAACAC
CGACGACACAGACGACAACCACTACAACAGCAACGACTACTACAACAACA
CCACAGCCTACCACAACAACACCACAGCCTACCACAACTACAACAGGTAT
CTCctttgaaaataattgacaTACTTGCCCTCAGCAGTTTCCGtatagaa
aaataataatatttattAGGCTTTACTCATCCCagtatttgatatttttt
ctgaaattgcaAGCTTTCACGCATTTTTGTCTCGAAATTTACGGTATTTT
CAAAAGTAGGGGAATTTTTTTCGgtaatatttttagaaaattgaaaaatt
gcaaatcaaatcttttttttagcAAAACCACCACCAAAAGGTTGCGAGGA
TACTTTTTGCACAATGTGTTCAGAAGGTTACCGGAAACTTGTCTTACCTT
TTGGTAACAGCACGTGCGTCGAGCGGTGTCCCGTTGGATTTGCAGCACAA
GGAGTTGTGTGTTTAGGTAAGAATATTTTTCCGATCTCATCTGGCGTCAG
CGAATCGTTGAATGTTACCTGATATTGAAAAGGAAAACATAATTATATAT
TACAATATCCCTTATCTAAGTACACACAATGATTTTTGACCTAGAATAAC
ACGCATGGTTTTAGTAATGTGTCcaaaaaacattgaaactttGAACGAAG
AAtttctaattgttttttttttttaatcctttATGAAATGACAGTTTGGA
GTAATTATCataaattatatttcaataCAGCTTGCTCTGATGCCAGATGC
GGATCATGTGAGGCTTCAATTTCGGAATGTGAACGTTGTCGACCCGGTTT
CTCTTTAATGTTGGATGCGAAAAATATTTCGACTGAATGCGTTCGATACT
GTCCGAAAGGCTACACCACAGAAACAATCAATGGAGCACAAGTATGTACC
AAGGAAGAAGAAAGAggtaaaaatgtttattttttatgcGGCGGATTATC
AGGTAGCACGTCACAGTTCCATATGACAGTTTCATTCTATCTAGgacgat
ttttcaaagattctacAGCTCAATGTCTTCATAAATTATTGATTGATACG
AGACCTGATGATCCTTCAACAGAACCAGAACCTATCAGTACTAGAATCCT
CGCAGATAAACATAATCAAAAGTACTCTTGAATGTAGGATGTGGGAGAAG
TCCACCAAAAGAGCTAAGCTctggtttagacggcccacttttaaCCCTGC
CTATGTTTCAATTGTTAATTAAGAAAGTTTCTCAACTAGAAAACTAAATG
CTTGCGATCAATTTCGAGTGTTAAACAATACACAGTATGGGAAGTCTTTT
TATAGTCTTTTAATACGTCCCTGCCTGGCTGTCTACCGGTGGAGCTCGAC
AATTTTAAATGCtgataaatttattttcgaatttCCAAATAAGTACGAAA
CTTCAGGGTATTCTACCCTTCCTTAGAGAAAGTTCCATCTAGTTCCAACG
GGGTCTATAACATGAGGATGTTACCGTACCAAACATAATGTCATATATAT
CACATTTAACGAATAAATAATctgatgaaattttgttttagaatgTCCAG
TGGCCAACTGTGATCAATGTATAGGCGATTCCCTTGTTCCTCTCAACCGT
GGATGCTTGAAGTGTAAAAAGGGCTTTACATTGTTCAGAGGGTCATTAAG
TGACCATTGTTACACTGTGTGTCCACCAGGACATAACGAAATCACTGAAC
CGAAAACCAAATCAGCAATCTGTGAAAGTAAGTTGTTATGATTTGATCTT
TGTAGATAATCCAGATGTATTTCAGAGTTTACTATGAGATAAAGTTTAGA
AAGACTCCAACGGGAAAACAATAGGGAGGAACGGAATACTAAAGTGTGGA
AGAAGATATTGTAAAAAATCCATGATTTTGAAGGTTTTAGTTTTACAAAA
GTgatcccgtttcatatcagacacatgtttcatataagggcagttttact
ctttctaaccaatcttgctccacatccgtgtcaattcaatgtgtaaaagc
ttgtaaattaaaattgatgagtaagcaaacgatatcactcttatttaaaa
acaaaacctttaataacaAGTTTGAGGATAATTTACAACAATCCTACGAT
TTTCTCACTCAATTTCTCTCTTGTAGAATGTAAAATTCCATTTTGTAAAA
TATGCAATCGAGCGGATATATGCGACGCATGCATTGAGCCCATGGTTTTA
GACACAAGTACCAACAGATGTCGTTTCTGTAGAGAATACACAACTTACAG
TTATGCCACAAGGAAATGTGTACCTGTCGGTGAGTGGAATATTCTCATCC
CCTATACTAACCAGTACAGTGGAGTTCCACatacctctacaactcgaatg
tctcctttaaACAAATTTTCTAGTCCTATACTGTAATCCCTTCACTGGAC
AATGCATTATAAACCCGTATGAAATAGGCGTGGTCATCTTAAATCATTTA
AAGGCTCCCCGAATCTATAAGCATCATATTCATACCTTTTAGCTTTTCTT
TCAGACACCAATCAACCAGAATCTAACCTGGACAACAATGAGATTGTTTT
CGGTGGTCCGTTGGTTGGGTGAGCTTTCCTGGCAAAGATCACCAGAGCAA
AatataaatatcaaaatataactttttagAGAGAGGAAACTTTTATAAAG
ACTGTAACAGAATTtaagcgagaaaaaaaagaaacgttTTATGTACAAAC
TATTATTATCAAGACCATCTCCATCGAACTATCACAATAACAGTATTCTG
GAAGATTCATTGATTTTagatgaaaaagaaatcatttgAATCTCCAACGA
TTAAAAACAAATACCAATTCCATAATATCATTGCAAAAAAGAAATATGTG
GTGCGGATATTAAAGTCGTTTACGGCTGTGGAGAAAAATCGTGGTGAAAG
TGATTAATCGCGTACCTAGCCCTACTAAcactactttttgattttactga
tggggCCAATCGTGAACACGAATAGTATCACGAAAACCTAGAGTGCTATT
AGAAACATTAGAAGCAAACTTGAACTAGGAGACTGGGACAAGTTTGGGGA
GTGATGAAGTATACGACCAGCAACTCAGACTTTACTATTggtattttaca
ttttacatttCCCGCTGTCTTAAAAGATGTCTCCAGGTCActggagacag
gggtgttttccGCTGGTAACAAAAAAAGTGGCAAAATAGGTTAGATATTG
AACATATGTTTAGTCTAAACCCCCGTCATTGTTAAGCAATTAGTAGCTTT
TGAcctttttgctatatttttttGCCCGAAAAAAAATATAGGATAATTCT
AAATTCATATTCGAAATTAGCGAAGTTAAAAGTTAGTTTCAGTAACTTAA
TaaagtgaaaattgaaaatatttggttAAATACCGGGGGGGGACACCTAT
GCAAAACagggtcagggtcccttttttagcctctgaagatatctgactaT
AGGTCCAAAAttcactaattttcaagatgtgcatctgacagggtcgactt
ttggtaaTTTAGAAAGTTAGGTAAGTtagaaaattttcatcttttggtCG
ACTTTTAATCAATTTAGCCACGCTGTGAATTTCTCTTTAGAAGAGATTTC
AGTAACTTAATatttcttttaacttttttaaacctTTAATTTGTTAATCT
TTCAGAGTACATCACGTTTTCCCTGTCTAGACATGTCTGCGTTGTACATC
aatttatcttttcaaaaactgcttCTAAATAATTAATACAAATCTTATAA
TCTTCAGAATCATTCATTTTTTTAGCCCGTTTATAGTTTTAGGCCTTGAA
ACTAATTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070198TCONS_00070198Clytia hemisphaericatranscript
TCONS_00070199TCONS_00070199Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070198-proteinTCONS_00070198-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:89233..94943 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.61	0.69	0.6	4.35	4.24	52.65	56.23	60.34	65.36	195.76	37.72	35.45	25.59	52.73	49.44	19.64	35.05	38.92	78.3	258.13	267.1	80.53	103.39	158.85	172.35	128.72	164.8	407.43	460.27