XLOC_043773 (gene) - C. hemisphaerica

Overview
NameXLOC_043773
Unique NameXLOC_043773
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_52:94270..100374+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043773 ID=XLOC_043773|Name=XLOC_043773|organism=Clytia hemisphaerica|type=gene|length=6105bp|location=Sequence derived from alignment at scaffold_52:94270..100374+ (Clytia hemisphaerica)
ATGCCGTTACAAGATTGTTATCAGGGATACGATATGTCCTTTTTGTTGTT GATCACACAAATGAGTTGGGAGGAGGAGAAAATATTATAGAATTAAAGCC ACGCGTATTGGATAAGATAAACACTGCAATGGATACAGTGGGTTCCGCAT CATGCATCTGTTGAAGAAAGTGAGGTATATTATATTTTTCCTATCATGCT TGGTGTTACATACATGCTATCGTTCAACCAGCAGTATTGTGAGTCAAAAA TAACCTTATGAACCTgtctattattttatttttaacttttctctttttca caGCTTGATTTGAAACAAGAAGATAATGCCATTGTAACCCATCATCCTAA ACGTGTTAAAAGAAAGTGACCTGTAGTGTAATTGCATTTTGAAAGAATAG TTTATTTTGGTCTTTTTATACTTTCAGAAGAGAACATTTTGTTCTGTGCA TCAAACAGGAGATCTAAATCAAGTCAGTGTTAGATTTAAGTCACCAAGGG CTTATAAACTTCTTAAGTTCCTATGcaataataaaatcttattttctagA GGTACTTGAAATGTTTTGAatcataaattttcagaaaaagtaacATCAAT CTCCTTTCGAGTAATAAAGTTTGGCTTTATAAAAATGTTTAATGTCTTTG TAATCTCAACCTATTTTACATCTTTACCCATTTAATactaaaacattttc tgcttACTATTTAGTTCACAATGCAGATATTTATAAAGTTAATAGCTGGT ATAACTAAAACATTTAATGTTGAGCCAAACGACAGAATTCACACTGTCAA GGGTTGGATAACAGATGTGATTGGTGCCCCAATTGATCAGCAGCGATTGA TATTTTGTGGCAAGCTATTGGAGGATCATAAGGCAATACGAGATTATAAA ATTTATGAGGACTCCACCCTGCACATGGTACTTCGTTTGAGAGGCATGAT ATCAAATTTCTCTGAATTTGATGAAAAGGATCCACTTAATGCGTTTTTGA TGCAAGGAGATGTTACCGGAGTTGAAATCTCAGAACagcttttaaaagaa aagagaaaaacatgtGATTTTGGttctaaaatatcaaaattgaaacTGCA TTATACTggtgatgaaattttgagtGATGAGCAAAGAAGAAAGTTGATCA ATCTAGCTGACTTTACGCATTTCTTGCATCAAGTGAAAAAGAAGTCGGAA ACTGTTTTTCAGGATATAAAAATCATCATACCCAATGGACTTTTGAATCA AATCATTGAAAGTGTTGGGGTTGAAGATACCTTGAAAAGTCACCACACAG AGACTTCTTGTAatacaaaatttgttttgagaCGCACATCTCCGACACAA GGATGTTTGCCTTGGCATGTTGATGGAGTTTATTCAAATTCTGTTGTCCA ATCCACTTTAAATGATGATAAAAGTTTCACTGGTGGAAAATTATGTTATT TCATTGATGACACAGGCTTGTTTATCCTCGTCGTCCTGCTGGAACTTTAT CTGTGCATCAGAAAGAAATCATGTTGTCACAAAGATTGTTAAGTGGTGTG CGATATGTTCTCTTTGTGGTTGACTGCAGGAATCATTTAAGTGACTCTGA AGAAAATATTGTGACATTGGACCAGAAAATGTTGGATAAAATGAATGCTG CATTGAAAAGTTCATCAGAATCTGATGAAGAATCCGATGAAGAATCAGAT GAGGATGAAGAATCAGACGAGGATGAAGAATTAGATGTTGAATCAGATGA AGATGATGATAAGAATAACAATGAACTCAGAACAGAGGTATACAAAATCT AATTTAGCAGCAAGATCTGAAAATACATTTATTACATTTCAGTGgaacat tgggcttttccagaaaaatattttgcccccactgttgaggatattgattt ttcgaagtatcgaaccccctggatatcctactttattagtaaagaccccc tggatatccactctcaaaaatatgctcaaccccctggatatcctctctta taaagatgcttacacCTGGATATCgtaattttttacttgaaaagacactt tactcCCTGGATATctgctcccttgtagatatttaaccccgaTAGCCGAT agcctcaacagggggggggggcacagaCTATTTCAGGAAAAGCCCATTAA TggttaaaatatttccaactttCAGATTAGAACTGAAAAATCTCTGATCA AACTATGTATTGCTGTTTTAAAAGGTTGTTGTTGGTGGTGAAGAAATTAA TGGGGAAGCTGATGACGGAGAAGCTGGTGCAAGAGGTGCAAAACGAGCCA GAAGACACTGAATGATATATATCATGATAGACATTTGTTGTTTctgattt tgttatttttgttcatGAATTTATCGATAAATACAAAACATGTCCCATGG GCTTCACATACTGTTTGTCACTCTCTCAGCCATAGCACTCCTTATTTTTT ATGCACTATAAAAATGAACTCAGCTAACTATAGTTCTTTTGTATGTTTCA GACAATATGCAAATATTTGTGAAGACTTTAACTGGTAAAACTTTAGCTTT GAAATGTGATCCAAATTATACAATACATGACTGCCAATGCCAAATACAAG ATATGGAAGGTATCCCTCCTTCTGCACAACGTTTAATTTTTACTGGAAAG CAATTGGAAgttcatcacaaattgattgaCTATGGTATTAAAAAGGAAGA TACTCTGCACTTAGTACTTCGATTGCGAGGGATGATATCCAATTTCTCTG AATACGATGTCACTGACCCTGTAACAGCATTTTTAATGAAAGGTGACATA ACTGGAGTTGAAATCTCAGATGAACTTTTAAAAGAGAAAAGGAAATCTAT TCCAAACAGTGCGGAATACTCCAAATTGAAGATGGAGTACACTCATGAAA GTATAATGagtgaaaatcaaagaaaaaaattactcgGTGTGGCTGACTAC ATTCATTCTTTGCAACAAATTAGAAGAAAACCTCAGCAGGTTTTACAAGA TATTAAAATTATATTACCTGATGGTGTGATCAATGAAATTACTCTTGTAA GGTGTATTGAAAAGATTCTGAAAAGTCACCATCCATCAAACTCAGGTTTG AAACTGGTTCTAAGGAGAACATGCCCAACTGAAGGATGTCTACCTTGGCA TGTTGATGGAAGTTATTCTCAAGGTGTAGTTCAATACACACTTAACAGTG ATAACGAGTACACTGGAGGGAGATTATGTTATTATACTGATGATGTTGGT CTTTTTGTACCGCAGCGATCAGCAGGTACTCTATCTATACATCAAAGAGA AATACATGCAGTCACCAAATTATTGTCAGGTGTACGATATGTCCTTTTTG TTGTTGATGGCACCAATGATTTAGGTGGTTCCGATGCAAATATTGTGAAG TTAAGACCAAAACTCTTGGCAAAAATGAAATCCTCAATGGAACTGTTAGA TTGTGATTCAGATGACGAGGTTGGTGAAAACAGCAATATTAATAAAGTAT ATTTTGTCTTCATTTCAATCAACAAAGTTTAAATAGAATATTTTGGAAGG TTATTTAGCAAAATTTCAAGACTATGTGCTCTAATTTGCTGTGTAGAATC AATTCCTTCTCAAAcaaaaaaccttgctttgaccactggcATATGACACT CTGCTGCCAGCTATGTACTATCAgattgaaaaattgtaaaagctTTTACA GCATAGCTGTAGTAATAGTTTCCGAAAGATGTGTCCAAAGTTACATCTCA AACTCTTGTTTAGGACGATGAAAGTGATACGAGAAGTAACAAAAGGGATC AGAAGGAAGACCCAACTCCAAGTCGTGCGAAACGAGCCAGAAAAAACTGA TTCTACTTGATTCTACACAaccatttttttatgttttactgTTGACGTTT CTGCTGGATTACTGGGAAACCTCACATTGAAAATACCTGAAAATACTCTG AAACACTATTACCACAGTGGGTGTTGATAACAATCTAAAAATTGTTGTGA GAAGTATGGTTCTACTAGTAGATGTACATTATATTGTCATATTCTCAAGG TGTAGTTCAACACACACTTAACAGCACCAAGGAACTTACTGCAGGGAGAT TATGTTATATGCTAATGAAATTTGGTCTAATTGTGCTACATTATTGATTA CGTTAGTCTGATTGTGCTGTTATACTGGCAACGTTAGTCTGTTTATACCT CAATGTCCTGAGGTGCAGACACCTTTAATGTACATTGTAGAGAAAAAGTG TTAACTGGGTACATTATTTCCCGTTTGTTGCTCGTAGAGCAAATTATTTG GGGAGAAGGAACGATGCTCATGTTATTATATGGATAAATAAGTCGAAGAA TTCTGCAGCAAAGAAGTGATATAGGTGTCTGGGTAGTGTTTGAAACAATG GTGacgtttttagaaaaatcagtaCCTCTTTTAAGCCTTATAGTGTACTG CAAAGGAATGAAAACCAAACTCAAAATGAAATCGTTATGTAATTGTAAAT AGGCTTTGAGACCAAGCCAGtcctttgtttatatttttggaGGACAAAAC TACAAGTCTAGTAAAAAACTGTTCACTTGTTAACACAAGACCTGGTGTTA ACAGCTAGAATGATATATTTATAGTCTAGAATACAAGCTCcataatcaaa ataaaacataacacaTTTTCATTAACGATATTTAGACCACTTTACGTGTC TTTTTCAAGTTCATGCTCAACGTTGCCAGTATAAAAAGCTCCATAAACaa tattcttaagatttttaaaatgtacatagtaaaaaaagaaaacactttaT TTACACTTCTTTTGAGATGGTCAACTCTgtatgtaaattttttgagaacC TCTGTATTCTTAAGAACCTCTGTGTGTTAGGAAATGTTCAAACCCTGCTC CTGGTGTTATTCAAGTAACCAAGAGTATGTAGTGTTTTTGCAAGTTTTCC CTTTTATTGCAATATTGATAACAAGCATAACAATTCTTATTCCTCCATTT CAGTCATAATGCAGATTTTTGTACAAACATTAACAGACAAAATAATAACA TTGGAAGTTGAACCAAGCGATACTATAGATAATGTCAAAGCCAAAATTGA AGAAAAGGAGGGTATCAAACCAGACCAACAACGTCTGATTTTTGCAGGCA GACAGCTGGAAGATGGGCGTACGATTTCTGATTATAATATTCAATGTAAT ATGCAGTTGCACTTAGTACTTCGATTGCGAGGGATGATATCCAATTTCTC TGAATACGATGTCACTGACCCTGTTACAGCATTTTTAATGAAAGGTGACA TAAGTGGAGTTGAAATCTCAGATGAACTTTTAAAGGAGAAACGTGAGAGA TTTGATGGTGCTGAAACTACAACGTTGAAACTTGAATATACTTGTGACAA CATTATGGATAACGGTCAAAGAAAGAAATTGATAGGCGTTGCTGATTACA TCCACTCATTGCAACAAATACAAAACAAATCAGGAATTATCTTACAAGAT ATCAAAATTGTATTTCCTGAAGGTATGTTGAATCAAATTACTGAAAGTGA TTCAGTTGAGAATCTTTTGAAAAGTCACCATGTTAGCTCTTATGGAAAGA AATTAGTACTGCGGAGAACAGCGCCCACTGAAGGATGTCTACCCTGGCAT GTTGATGGGCCTTACTCTCAAACTGTCGTTCAATACACGCTCAACGATGA TAAAGAATTCAGAGGAGGTAGATTGTGTTATTACACAGAGGATGTAGGCC TGCTTGTTCCTCGCCGTCCTACAGGCACCTTGTGTGTACATCATAGAGAG ATGCATGCAGTCTCAAAGCTGTTAAGTGGGGTACGATATGTTTTCTTTGT TGTTGATGATATAAATGATTTGGGTGAGCAAACTGGAGCAAATATTATCA CATTGGAGCAATCAATCATTGATACAATGACCGCAACTTTAGGGGTGTTA AAGTAATCTCAATCATACGAAaaactaggctacgtcatatcttcttaata tttttgtttccaaaaatatacacgAACCGAACTCGtagaaattttgttgg ctctaGAGAGAATCACCCTTCTTGATGGTGAAGTTTCAATCAGAATCTTC ATTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070291TCONS_00070291Clytia hemisphaericatranscript
TCONS_00070292TCONS_00070292Clytia hemisphaericatranscript
TCONS_00070293TCONS_00070293Clytia hemisphaericatranscript
TCONS_00070294TCONS_00070294Clytia hemisphaericatranscript
TCONS_00070295TCONS_00070295Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070291-proteinTCONS_00070291-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:94270..100374 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.96 6.77 3.84 4.23 11.18 9.45 9.65 10.11 7.33 6.06 8.99 7.4 10.25 10.71 13.39 14.85 10.5 13.5 7.74 6.42 8.15 8.69 9.48 10.64 13.01 10.41 4.46 2.65 4.8 4.7