XLOC_043964 (gene) - C. hemisphaerica

Overview
NameXLOC_043964
Unique NameXLOC_043964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:242944..245912-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043964 ID=XLOC_043964|Name=XLOC_043964|organism=Clytia hemisphaerica|type=gene|length=2969bp|location=Sequence derived from alignment at scaffold_57:242944..245912- (Clytia hemisphaerica)
CAGAATTTCATATAGGTTTTGTACTTAAAGCTTGACAAAAATCTGCGAGG
ATAACATTTTGAAAACTCGTGCAATGTTCACTTAATTTTACCAAAATAAT
GGTCTTCAAAGTTATAGCCCTGAAAGTATCCATGTAAGTATAGGTATGTA
ATCATTTTATGTACTCGAATTTTCTCGACTTTTATCGTTTTACTTTGATA
TTAACTAGAATTTAATGTATCAAAATCAAGAAATTTCACAAATTCATTGA
AAGTTAAAGAGTGTTTTTTCATCATGTTGACGCAAATGAAGTTTAACTGA
GCTCCATGATGGATTACCTCTTTTCTTTTCTTCGATTTTCACCAGAATTT
CACATTGAAATCATGAAATTTCACAAATTCATTAAAAGTTAAAGAGTGTT
TTTTCATCATGTTGATGCAAATGAAGAGGAGAGGAGTGAGAGGAGAGTGA
GAGGAGTTTATTGGCTTCCAGGTTAAACTTGTTCTGTTTGGGGGTAATTT
TGCTCTGTCTATCTAAGGGTAATTTTGATTGTCCATGAGGTCAACTAATG
CTTGTCCGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATTTCCAAAAAATGTTATATCTTCCATCCCCCCCATATAAAAG
CCCATTACCGTTAGGACACTTGGCAATCTTTCTTGGTTTTAATAAAGTTT
TACAGAGAATTCCCCTTTTTGTCTCGAATATTACGGCCATGAGATACACT
TGATTGTAGTTTACGAGGTTAGGTAGGAAATCCTACATAGGTCACGTGAC
ATTACAATAGACTTTGAGCGCTTGACCAATAAGAAGCTTCGCGAAAACAA
TAGCACCAATATTTTTTGCGACGTTGACTTTTTTTGCTTGGAAGAGCTTA
AAGCACTACATCTAGCTCTTCGGGCTTTACAGAATAATTTGTGACTATAG
CATTTTGAAAATTTTTTCTAGGGAAGAAAAATCAAAATGACATCAACGAA
AAACAAAGCATTACGAGACGTACCACACCAGTGGTGGAAAATCAGTCTTT
TCAATCTCATCCAGCTCAAACTGAACGGATGGGATTTCTTCCAACAACAA
ATAGAAAAACACCAGAGTACTGTATTCTGTGCCAAAATATTCAACGATTG
GACAACGTTTGTGTGTGACCATGTAGCTGTTGCTGCTGTATTGGACATGA
CCAAAACGGAGAGAAGCAAAACCGGCCATGGTTTCTTGGAGCTACGTCCA
GAAATGATGTTAGGTCAAACGCCTTGTGTGTTCAGTGTTGGCGAAGGTCA
TCAAATACATAAACCTTTTATCATGAATTTCGTTGCTAAGAGTTACGAGA
AACAAAAACCCAACATGGTAGCCATAATTGAGAAAGAATTCAAGGTACTC
AGTAAACATGGTATTGGTGGTGCTTCATCTGTGGATTGGGAAGGAATGTT
TTCGACTGCAGCTAAACGAGTTATTTGTCACATGTTGTTGGGTGTCCACA
TTGAAGACATTACACCTCTCGAGAAATATACACAAGGTAAGTTCAAAAGA
GCACGCACAATGCATTGTTTTGCCACCAAACATCTATAGTTATATAGTAA
CTGAGCTTGCACACAACGTTATTTCAACATTCATCTAACGTTATATGGAC
GTTGTGAACATTAGATAAAGGTTGAAAGTCAGGAAGAAAAGACACTTTTT
TATTCTGCTACTGGCAGTTTCATGCCACTTTGGTGACAATCTTCAGGCAA
CTCAAATAAATAAAATAAAGGTCAAAAGAACGTTGCGTGCCAGCTGGGCA
ACTTCAGGTACTTGGTGAGACCCCAACGAGTTGGCTTCAAACCAGCCAAC
TTGATCATTGATAAAATTGTAAGCTTGTATGTTGATTCTGACCAATGGGA
AGGTAGATACTGGCTTCAATCAGTAATTAAAAGCATTTTCATCTCTCTCT
TTTACAAAAGGTATGTTAACTATGGAAAAAATGCCTGGGGAAGCCGACAC
CTTGATCGAAAACATCATGACGATCTTCAACAAAGTGGATTCAATAAAAA
ATCTATCTATCCAATTCTCAAACAGCGGGTTGACCCAAGAAGAAATGTTC
AAAGACATCTGCTATGTAGTATGTCTGGATGCCAGCAACGCTATTACAAT
CTTCGTTCTCAATTCATTGTATTGCTACCTGAGATTATCCAGCAATGACA
AGCAACTGCTGAGAACAGAAGCTGATCAATATTTCAAGGATCCAGAACAA
ACCAATCTATCAGCATTACCAAATCTCCATAAATTCTTCACTGAAATGCT
ACGTTGGTCATCTAAAGCTTTCATTTATGGTAAAGCGAAATCCGATTTCC
AGCTCGATTCAACATCGGGGAAATTCCGGATTAACAAAGGAGACTTGTTA
TGCGCGCTACCTTACTTCATACACCGGGATGATCAACTTTTCGAGAATCC
CGAGCAATTTGATATGCACCGAAACCCGGAAGAGTCCGAAAAATACAACT
TCACCTACGGTGGTCGTTTTCTCGGACAATCTACACCGAGCAACCATAGA
TGTGCTGGATTCTCTCTTTCCAGAGATGTTGTCAAAACGTTTATTCTCTT
TTTCACTCGTTGCCAATTCGAACAGATCGGGGTGACCGAATGGACTGGAG
GAAAAATTTCACGAAAATATGCAAGTGATGAGCCGCTCAAATTATCCTCT
TTCAAATTTGAATAAAAACAGACATTTAATAAAAGGTAGCAATTCTCATG
GAAGTTGTTCTCAAAGATTGAAATACTTGAACGAAAACAACTTAGTTAAC
AAATAGAGAATCAAGTGAACTTGAAATTTTTCTAATGATATTAATATAAA
GATAAATGAAAGCAACAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070663TCONS_00070663Clytia hemisphaericatranscript
TCONS_00070662TCONS_00070662Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070663-proteinTCONS_00070663-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:242944..245912 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.27	20.79	11.91	11.67	252.6	190.82	41.93	38.03	35.78	37.19	14.53	13.77	5.77	6.61	0.97	1.72	1.85	1.64	4.83	5.98	3.19	3.09	25.02	22.52	18.39	7.9	0.94	1.15	9.46	12.28