XLOC_044373 (gene) - C. hemisphaerica

Overview
NameXLOC_044373
Unique NameXLOC_044373
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1499157..1507456-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044373 ID=XLOC_044373|Name=XLOC_044373|organism=Clytia hemisphaerica|type=gene|length=8300bp|location=Sequence derived from alignment at scaffold_60:1499157..1507456- (Clytia hemisphaerica)
CTTATAAGTATGATATATCATGATTATATTGGTGAAAAATATAAAATTTT CTCATTTTGATTATTTTTTAGTATTTCTCAGGCTTTGGAAATGAACTGGC ATCTGAGGCAATAGAAAATGCTTTACCAGAAAGAGGGGTAAGTCTTAAGA TTTTTTTCAATGATGTTGCACAGCCTGTTAAATTGTAATTTTTTGATAGA GGTCAATGACAATATCAGCTCGACCACGCAACCATGCTACCTGATTCTTT AGCATTTTGTAATATGGACACCTCTGACGGTCTTTACTGTATATCCAGAT ATTATGAACATAATTAGGCATCATATTGTTTGTTTTACAATTTTTGAGAG AAGTATTAAAAATGTATATTTGAGTCTGAAAATCAGGCTTTTAAAAATTA GATTTGGGGAGAGAATATTACTGAGAGGACCATTTTGTTTTCTTTTAGAA CACGCCACAGAAATGTCCTTATAACCTTTACGCTGAGCAATTATCTGGTA CTGCATTCACTTGCCCAAGAACAGCAAATAGAAGATCGTAAGTATAAAAT TCAATATCAGTGAATCACAAGCGGGGTTTTCTTCATTGTAAGAATGTGTT TGCAGTAATATTTGAATTTTAATAAAGGACGTGTATCATGGTCCGGCAGT TTTGATCTTTAATTTTCTTATTTTTCGTGGGCCATGATAATTGTTTTCGT CTTTGTATATTTTAGATGGTTTTATCGTATTTTGCCATCAGTCAAGCATT CACCTTTCAAGCCTTATGAAATCAAGAATTTCACAATGGGTTGGAATAAC CGTGTTCCAAACCCCAACCAGGTTTGACTAACTTTTAAAACATTGAAGTT TTTAATGACTTTAACAGTCAAACTTCTGCAGCAAATCTTTGATTATTATT TAGCAAATATATATATTAACAAGCAATTTAGAACAACCCAAAGTTTTCTG GACCGCAAAATCCAGGTGGGTAAAAGTGCTTATTTACTGTCATTCCTCAG TAGTCCGGGAGCCAAATCCTATATCTCCTTAAATAAGCACTTTTGCTTAA CCCAAGATTCTACAGGATAAACTATACATTTTTGGAATCCTCAACTATCC TAGTTTTGGAAATGGTTGTTCCCCAAAGCTAACTCCTGGTCAATTTTTCA TACTGGGCCCGAGTTTAGGGGGTACTTTTTACCCTTTGTAAGGATTTGTT AAGGAAAATGCCATTCCAGGGATGATATAATTTGCTGTATCTAGTGAATC AGTTGACCAATTGCTTTGAAACTTTGCAAGAAGTTTCAAGGTAGGCTGAT GATTATTTTCGGCAAAGAATTTTTGTGAAAAATCATTTTTATATGTTTGC CTGGGGAAAAAAGGGAAAATTGGGTATTTTAACTAAATTTTGACCCTTTT TAAGTCTGGGACCTACCCCAACAACTTTTAATGAGACACAAACTAGGTGT TATGATAGACTTTGATGCAATACATCAGAAAAATTTCAAACAGACAGGGC TGCAGGGGGTAAAATTGCCCATTTTTATGGGTTTTTACCTTATTTGAGCA ATTTTCACCACTAATCTTGGTTAAAACGTTATCAAAAATAGTTTTAACTT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCTATCATAACACCTAGTTTGTGTCTCATTAAAAGTTGTTTGGGTAG GTCCCAGACTTAAAAAGGGTCAAAATTTAGTTAAAATACCCAAATTTTCC CTTTTCTTCCCCAGGCAAACCTATAAAAATAATTTTTCACAGAAATTTTT TGCCGAAAATAATCATCAGCCTACCTTGAAACTTTTTGCAAAGTTTCAAA GCAATTGGTCAACTGATTGACTAGATACAGCAAANCGGGACCATTTTGGG AAGCTCTGAATAGCAATATAGTGGAATCTCAAAGCAAAAACTGACAAAAT TACGTGAAATAAATGTTATCATTTGGGCATAACTTAAGTTAAATCCGTCA TTATTTTGTGTAGTTGTCAACAAAAGTACTAAGAAATGACTGAAGGGTAT ATAACTGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA AAGTGGTGTATTTACCCCCTGATTTGCCCACAGTGACCCTGATTACAGAC AATGAAAACCACAAATAACTTTCCCATTGCTCCTACTACAAAATTATCCT TGTTTCAGTGGTCAGAAATAAACAATTGGTACACCATAAAACCGCTTTAT GGGTGATTTTTACCCCCTGGTTTGTCCATTTGCACCCTGGTTTTGTTAGT TTTAAGTCAGCATTGTAATCTTTCAGGATATATTACACGAAAATCAAGTT AAAACTNTTGAGGATTCCAAAAATGTATAGTTTATCCTGTAGAATCTTGG GTTAAGCAAAATGTCATTTTTTGGGTTTGGCTCCCGGACTAAGTCAATCA GGATCTAGCAAGATCAAAAAGCTAACTGGTATAAAAATATTTTGTGAGTC ATTGATAATCTTCTTCAAATGATTTAAAGTTTCTCAATAAATACATGTTG ATGTTTCAGTTAAAATGGAACCCATTTGATATACCTCCAAAAGATACAGA TTTTGTTGACGGTTTGAGCACAATATGTGGTTCAGGTGATCCAAAGACTA GACATGGTATTGCAGTTCATGTTTATGCTTGTAATAAATCAATGGCTAAC AGGTAAAATTATATGCCTTTCATGAAATTGAATTGAATATTAAATATTGA AATTTTGACTTGTTTCTCACATTTGTATGGACCAAGTGCTCAATAAAACA TTTTTAAGTTTGAAATTTAAGCTTTTTGGACCTACCCCGGTGGAGGTCCT ATAAATTAACCTTTCTTCGTCCGTCCGTTCGTTCGTTCGTTCGTTACCAA CTTTTCTCGAGATTGGCTCAGTAGTTTTTTCTGATTTTTTGCACAAAGAT GTGTAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAAAA AATTTTGGGGTAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTG GACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAA GTAGGGTACCATCATAGGTAAAAGATGGCTCTAGCAGATTTTCGCAAAAA AAATTGTTGGCTCAAAAGACGCATGTTTATCTATAAGAATCACTATTACT AAGCATATATCAATGTTCTTAGTCAAATTGCTCAATTTTTTTATGAGATG TTTTTTTTGCTCACAAAGTCTTGAATATGAAAGAATATTTCAAGAGCATG AAATTTTGGTTAATGGTCACGTCACGTAGATATCAATTATATATGTTTTA AATGCACAACCAGGTAGGTCCATAAAAGTATCACTTGTTTTATCTGCAGA TATTTTAATTGTGTTGTACGCATAAAACAATCGATCTCTTTGTTCTGGAT GCAATGTTTAAGCCAACCATCTGTCTTAAACATAATCTGCAGTAGAGACA AAAAAGGCTGTAACATTTTAATAAGATAGCGATTATGTACTTGTTGAAAA GATATTCAAGAGTGGAATATTACATTAATGAAAAAAAATTGATTCAACTC TTGATTAGCTTTCAACGAGCACAAAATACTTATCCAATTTAAATTCTATC AATCTAAAGGTACAGCATTTTTTGTTTCCCTCACAAATTATATTGACACA GACTTGATTTGATATAAATACCGTATTACTTCGAATAAACGCCTGAGTAT TACGGTATTACTATCTATTCTATTTAGATGTTTTTGCAATTCAGATGGAG ACTTCTTGATTGGTAAACAATCTATTTCTTCGTTTTATTTATTCTTCATA GTATACCTCCAAAATATTTTGCAAATATATCAGTCTTTCTTTACGTTTTG TCAAAGTTAAGTAAAGTCTTGTTCTTAAACAGTGCTTCTTTTTCTATTCT TAAATATGTTTCTTTTTTGATCACCTATAGTTGTTCAACAAGGGAGCCTT TTGGTGACAACAGAATTTGGCAAAATGAAAGTTGACCAAGAAGAAATTTG CGTCGTGCAGGTAATTTTAAAGATTACATACCATTGGAAAGATTTGCCTA ATTTATTTCCTCGTAGACTTTACTATTTTCATTCTACCCAAAATAACTCA AATATTTCACACTTTACTTCAAAAGCAACAAGGTTTGGCTGTGGAAAATT CAAAATCTTACCATAATCCTATTAATTTTCCGCATCATTTAAATTAAGGT ATCCGGCGCGCTGTTTTAAAGTAACGCGCATCTTATAATTACATCCCAGA GGCATTTTCAACCTATTTAGAGGACTCGTTAAAAAAGAGCACCATGATGA GATTTCTACAAATTTTATTAGATTACTAATTCGCGCGCTTTTGATTTTCG CGCGTGTTTTCTGCGCAAAAAATAAAGGCGCGTGAAAGTTAATGGGATTG AGTTATCACGTTTTACAGCAAGGAATGCGATTCTCAATCGACGTCGATGG ACCATCACGTGGCTACATCCTGGAAGTTTATGACGGACATTTTGAAATCC CTGATCTTGGACCTATAGGTTTGTCATTATTTTGCTGTCTTTTTTACAGA TCCCCTTTGGGTAAAAGAGTTTTTTAGGACAGTACATTTTAGTANTTGCT GTCTTTTTTACAGCTCCCCTTTGGGTAAAAGAGTTTTTTAGGACAGTACA TTTTAGTACAGATTGTAAAAACTTTAATGGTTTGTCCGGCAAGTGCTTTA AATAGGTCATTGTATCTCGAGTTATTTAAAGATTACTAAACGAGAACGTT TTATACTTGGAAGGTGCGAATGGGCTGGCGAATCCACGTGACTTTAAAAC ACCACAGGCATCATACGATGAGAACTTTATGAGACCTGATGGATTCGAAA TTATTCAGAAATACCAAGGATATACATTCAAAGCTACTCAGGTGTGTTTT TCTTTTTATTTACGGGGTTAATTTTGCTAAAAATAATTTTGCAGATAAAT TCCTATCGGGTCACTGAGAAATATGTGTTCTAAATTCCAAATAAACATTC AATAGCTTACTGAGTGGGGTGTCTTTTAATGGGTAGCAAATTTGATGATA TAAAATGTTAAAAGTTAAATTTATTATTGTATGTAATTTCTCGTTTCTCA GGACCATACAGTGTTTGACGTTGTTGCATGGCATGGAAATTATACACCGT ACAAATATTCTTTGAAAGATTTCTGTGTCATCAATTCTGTTTCGTTTGAC CATATCGTGAGTATTGCTTTCGCATCAGATATTACCTTAGCCACTTTCTT GAAGACGGGCTGAGTGAATGGCTTAGTAATTTTTCTTGAAATCAATCTTT TTACGTCAAAAACACCAGTTAGATCTGGTTAGACTTTAGTAACGAAGTTT GTTATGTTTTTTTAGGAAAGATATTTAAGTCAAATTCTGTATTTCGCAGT TAACTATTGTAAACATTAATCGCAATGGGAGCTGTGAGTTTTTGTACGCA GTCGTAGTTTTCATGTCAAAGTCTTTCCCTAATAAAAGTTTTCTTAATTT TGTTTTTCTTTTACACAGGACCCTTCCATCTTTACCGTATTGACATGTCA AAGCAACAAACCAGGAGTGGCTATCGCTGATTTCGTCATCTTTCCACCGC GTTGGTCTGTTCAAGAAAACACTTTCAGGCCACCATACTATCACCGTTAG TTGAGTTTTACAAAAAAGTCGAGCAAAATTTAATGTTTCTTTGATTTTCG TCAAGTTCTCTCAGTTCATCCCTCTTTATACGGTCTTATATCCCTTCTGT ATCAGAGTCTAGACCTGGTCTCGTGTGTATCGAAAATGTTAACTTTGAAC CCCACGGAGAAACAGGCCGCCTTACTATCACCGTTAATTCAGTTTTACAT AAAATTCTAGTGAAAATTTCATATTTTACTGATTTTTATTGAGTAATCAT AATCCATATTGCCTTATACACCGCCGTATCTGTATGAGAGGCTAGGTCTG ATCTTTTATGCATCGGAAAACCGTCGTCGGTAGAATAATGCTTTCTAATC TTATCACTATTGAAATTTCCATGAAACTCCGAAGGAAAAACAATTAGGCC AAGCAAAACATTAAGATATCTGGTTGTTGAGACAGGAGTGTAATTTAAAT TCATTTTATCCATTCAACTTTTTAGGTAATTGTATGAGTGAGTACATGGG AATCATCAAAGGAGGATACGAAGCCAAAGTAAGCTCGATGCTACTTATTA GCAAGATTTTTACACCTGTTAAAAGATAGTTTTCTCACAAATTCAAATTT GGCTGCCTGTGAAATGAGCTTTGTTTCTGACAAAACTAAAAGATTTTTTT TTAAATTGGAAATAAGACAGTCAATAGTCGACATATGATACTTTTTTGAA TTTGACTTAATCATTCAAAAAGTTATGAAGCAAAAACCCAAAACTTTCTC TAAAAGTCAATCCAAATTTGTACATTTTTTTGAATCACCAAGTACAATCT ATCCGCAGACACGTGTTTCGTCCTTCCCAGTCAAACACCAAGTACATATT TTACAGTGTGCACGAATTTCCGCATAAACTGTATAACTATTTTATCTTTA TTCGTTACTTTGTAGGCAGTGACACCAGGCTGTTCGACTCTTCATAGTAT GATGATCCCACATGGTCCAGCATCCAATGTTTTTGAAGCTGCTTCGAACG CTACATTGAAACCTGAACGCGTCGCAGAGGGTACTATGGTGAGCGTATAA ATTTGATTGAACTACCTTGTAGTGTATTAATTTTGCGTGTACTTAATTTG GTGGCTGGCCAAAATGCGATTTTAGCGTATATTAAATTTAGCGGAGATTT AATTTGGCGGGTGGGGAAGTTTTAGGCACTTGTAAATCAAAAATTACTTG GTATTGTAATCGCTTTTATTTAAAATGCTGAAATTTGGCTGGTATTTAAC TTGGCGGACGGTCAATTTAAAAAAGATGGCTCTTCAAATTCAGTCTTTTT TCACGGAAATTTTCTACTTGGAAGGTACGAGAGATATAACCAACAGGATT TTTTTAAACATGTAAGGTCGATTTTTATTCTTCGATAGCTCATATCTACA TAATCTAACTATAAAATTAATTTTCAAAAAAGGTACTTTTTAACCATTCT TTCTTGATTCAGTCATTTATGTTTGAAAGTTCACTTGGATTGGCGTTGAC AGAGTGGGGTGAAAAAACATGCGAAAAAGTTGACGAAAACTACAGCAAAT GTTGGCAAGGCTTGGAAGCTAAATTTGACAAGAATTTGAAAATCTAATTT TTTTTTACTTTTGTAAGCCATTTTTTTATATTCCTTATTTATCATTTTTT TAAGTCTTATTTGAATTTTTTTAATCCTTTTATTTATCTTCTGTTATTAA GACGTTGTCTAATTGAATTAAACGTGCATGAAATTGCCGAACATCCGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071464TCONS_00071464Clytia hemisphaericatranscript
TCONS_00071463TCONS_00071463Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071463-proteinTCONS_00071463-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1499157..1507456 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HGDhomogentisate 1,2-dioxygenase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.58 27.28 51.9 63.12 66.21 53.16 26.68 27.85 26.5 25.7 27.25 42.75 23.24 32.08 23.22 21.98 29.65 36.92 17.09 15.73 30.56 29.62 36.97 39.09 33.27 33.83 105.1 127.53 13.1 14.3