XLOC_045376 (gene) - C. hemisphaerica

Overview
NameXLOC_045376
Unique NameXLOC_045376
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_87:22655..30239+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045376 ID=XLOC_045376|Name=XLOC_045376|organism=Clytia hemisphaerica|type=gene|length=7585bp|location=Sequence derived from alignment at scaffold_87:22655..30239+ (Clytia hemisphaerica)
aaaaaagtctaaaatctgcaaaattaaggcattcaaattttttttattga atttaataaTGTTGTAAAGAGAATGGACCAGATTTCTTGTAGCAGGTTTT AATCCAAATTTTATGAGAGTATCTAGGTCATATTGgccgttggtggccaa aaaggacactttttccagtgtttttctacTAGTAGAAAGGctgtttttat caatattttagtaatttcaagagGGGCAGCGTCTGATAAACAGACGCTTT TGTAAAGGGCATAAAAAATGGCATGGTATCATTATTGCAAACTAAACTGA AAATGGAAATACTTTTCTATTCATAGAACCGCATGGAAATCAATATCATT GTATCAAATCAACTGGAGATGGAAATTGTTTATACAATTCAATCAGTATT TTGCTGAATGGAACAGAAAATTTTGCAACTGAGCTCCGTATTCGAACTTG TTTTGAGCTTGTCAAGAACTTTGAATACTACTTGTGCCATCCACAAATCA AttctatgaaaataaaaacactcaATGGTAGAAAGGAATATACTTTAGAG GGACTTTACGAGGTGGCCTTTTTCAGCAACAAATCAGTTAAGATTTGCGA AAAAGAAGGTTTTGTAAAGGCTTTGAAAACAGAAATTGCCAGTAACTCAA AGAATGGAAAATACTGCAGTCTACTGGCTCTGATCGGATTGACAAACGTA CTAGGCATGCCAATAGAATCCATATATCCAGATCATAGATTTCGACTGCT ACCAATCATGCAAAACATTTATTATCCAAGAAAACATTTATCGCATCAGA ACCCAAGAATACTCAGAGTTTTATGGACCAAAATTTCAGGATGGAATCAA ATGTCAGAATTTCTACCAGATCATTTTGTTCCTTTGATTGAACAACTTAA GAACAGTGATACACCTGCTAATAAccttgaaagttttttcaattcaaaaa aacgCAGAAAAACATTTCTTGGAAATTCAAACAAACAACAATTGAAGAAA TATCGATCATCAAAGGAATCACAATCTgcagaaaacaaatcaaatcacAG TTCACAGTTCACAGTTCCAACATCGTCTGAATCACAGTTTACAGTTCCGA CATCGTCTGCATCACAGTTAACAGTTCCAACATCGTCTGAATCACACATC ACAGTTCCGTCATTGTTTAAATCACATGCTACAGTTCCAGCATCGTCTGA ATCACACATCACAGTTCCGTCATTGTTTAAATCACATGCTACAGTTCCGC CATCGTCTGAATCACACTTCACAGTTCCGTCATTGTCTGAATCACACTTA ACAGTATTGCCAATGTCTGAATCACAGTTCTCAGTTCTGGCATCGTCTGA ATCACACATCACAGTTCCGTCATTGTTTAAATCACATGCTACATTTCCGC CATCGTCTGATTCACAGTTTACAGTTCCAGCACTGTCTGAATCACATTCC ACAGTTTCAGCATCGTCTGAATCACACTTCACAGTTCTGACATCCTCTGA ATCACACTTCACAGTTCCATCACTGTCTGAATCACAGTCCACAGTTCCAG CACTGTCTGAATCACAGTCCACAGTTCCAGCACTGTCTGAATCACAGTCC ACAGTTTCAGCACTGTCTGAATCACAGTCCACAGTTCCATCACTGTCTGA ATCACAGTCCACAGTTCCAGCACTATCTGAATCACAGTCCACAGTTCCAG CATCGTCTGAATCACACATCGCAGTTCAATCATTGTTTAAATCACATGCT ACAGTTCTGTCATCCTCCGAATCACAGTTCACAGTTCCAGCACTGTCTGA ATCACAGTCCACAGTTTCAGCATCGTCTGAATCACACTTCACAGTTCCTC CAATGTCTGAATCAGTTCCAGCATCATCTGAATCACACATCACAGTTCAA TCATTGTTTAAATCACATGCTAGAGTTCTGTCATCGTCCGAATCACAGTT CACAGTTCCAGAACTGTCTGAATCACACGTCAAAGTTCCGCCATTGTCTG AATCATTCTTCACAGTTTTTCCAATGTCTGAATCACAGTTCTCAGTTCCG GCATCGCCTGAATCACAGTCCACAGTTCCGTCATTGTCTGAATCACAGTT CACAGTTCCGACATCATTTGAGTCACACTTCACAGATAAGACATCATTTG GATCAGCGTTGATACGTCAGCACAGCGATGAACTTCCTCTTGCTTTAACA ACACAATGGTATGCcaaagaaggaaaaaataagATATCTAATTGGAACCG GGACAATAAATCTAAAGATGAAACCGAGGAAATCTTCCTTTCTCTTGCCG AAACTTCAGCTTCATTGAAAACATCTGCTAATACCGACCACCTGAGAGCT GTAGCTGCTACCGGATTATTTATTGTTGACAACGGACCATTGGTAAAATC GCAAGATGTTGTTGAATTTTATAGAGGGTACAAGAATTTGGATGCAAACA AAAAGATGATGTCTGGAGCATTGTTCGAAACCTTACAAAAACATTTACCA ATACATCATATTTATATAGGTAAGCATGAAAATATTGCATATCTTGTAGA TCTGATTGAATCACCTCTTCACTTATTCATTTatagattttgaagcaaaa tatccaaaatgATATATTACCCTTTTTTATACTCAAAACACCTGATATTA CTATGTATTAACCCTATtaatactaggcttttaggggcggttcaaaactg GGGGGTGGGCTGTTCCTGTACCACCTctcaacttttgatctagttggtct ttttggatgaaatttggcacaaatgaCCGTTGTCgtataaggtaactttt gacaaaaaactttttcgatgCATCACTCATCATgtccaaagtgagcaaaa accgaaaatttcctttgttcttttgaatGGCCATTGTAATATAACAAGgc ttaagaaaaaaaatgctTATTATATCTGATTATATCcttaatattcaata aattacggtttaaaaatatatttgacataaaaaataagtttgtaTCGGAA AGGTGTCAacttttgtgacaccttactgtcagaaatgtcatcatgctcaa ggtgtgaaaatttttaggtgtcattttttatatttatgttttttttatat tgaagctaaataaaagttaagaatttacagaaaatttcatgccaaaagct ctattatttcagaagCTATTAACAATAGTTTCACCCCTGAATggaaacag cccccccccccataggccgaatagggttaaagataTCTCTGAAATGCTGT TTGATGTCAAATACTGTAATACcaaaatataacttttttggaattttttt gttgctttATTAGTTTCAGGTTTAGGCTAAAGGGAAAACTTGCTTGTAGT AATTTTCACGGCTGAgcaattttgttgtttgtaaaAAGAATATTATATAT AATGATATTCCTgtcttgaatatcttttcaaggAGCACAGAATCGTATCC TAATTCAAATCCTATCAAaagccaattatatctggacaagATTTAACAAA ATTCTTTCCTAAAATCATGTCCCTCAAACAGAATGCTTGATCCTTTATGA GATTAACAGATAATTTAAACTAATTACATCAAGAGTATTTTCTAGCTAAT tgctgtaaaaaaaattaagagatAAGAATTCCTCTCTTGCTTTAGCAGCA CTACTCAAACTGCAAACTAGTATTAATCACAAGTATCTGTTTTTATATTC TAGGGAAGCACGCATACATGTTTGAAGCTAAGCTCAAAGAGACTCTAGAA GCtgtgaagaaaatatttgacaAATCTGGAAGGGAAGATTCATTTACTGA ACATGTTGCTAACAAAATTGGAGATATCTATAGCGACGTTATTAAGATGA TGGACACAAAAAGAGACAAAGATTTACTAAAGGGGGTACTTGCTGAGGTT ACAAGTATCCGTTTTGCGTCACATATACAGGGGAAACAGAGTAGATCAGC AGTtagaaattgcaaaatgtcattgCGGGCCAATGTCAACAAATTCAGAA AATTGGAATCAGCTGTATTGAAGGAAACGAACCCTAAAGTAAAAAACCAG CACGCATATCAGCAAAGAAGGCTGACACAATTAAAGTTCAAAGAAATGAA GGTTATTGCTGAAGGACGAGGAGCCCAATTGAAGTCTGACAAATTCCCAG AATTGGCAATGGTCCTAGAAGGCGTATTTGGTGCCAATGGTATGGAGAGC CATCCAAGACTATCTGATGATGTGCTTTACAAAGCCAAGAGTAATTCCAT TATAATGGCCAAGGCTCGAGAAGTCCTGCTTGCACTGGCACCTAACAGCT TTAACATTTCCCTATCATGTTGCTACAACTACACCCAAAATTACAAAGCA GGAACCCATCAAGCAAAACGACATCACGATGGAAAAAACATCAATGCCCG GATTTCTTTGCACGCACCCCCAAGGATAGGTGTTGAAAAACCATCCCCAA ACCTTCATTGGACATCATCCAATATAAATACTATAATTGCATCATCACCA AATGAAACTATCTTTGATTCAAAAGACGCTAAAAGTATTGTTTGTGCTGA CATCTCACCAGTCCAAAGGATTggcaaaacttggaaaaaaagagaaggta aaattttttcattgtgcTCTCCTCTTTCAGTTAGTGCCAATAGGAAATtg agctttcagaaaaaaacaaatatcaatcATCTACAGGAtatatttgcaac aacaaggatgagagttacatgaatcaagttcaagatcccaaaACAATTAA TCAAAACTTGAAAAGAGACAAAATTGCAGCAGCCGGAATCAACACACTag attttgtcattcaattcctgagacagTGCTTCCATTTTTAGgtcttgttt atacgctaaagtaaaagtaattccgtacatgtaaatgggtcagtgtttga ggtctggcaaaatttccaggaaatagcctatccggtgCGTTCTGTCTAGA TCCTTTTCTTAGGAAGTTGTGCTTCAAAttatagttttcaaggttggctt ggctcaaactttttcatctatggctcaaattttaggtaatttctcatagt ttttgaaaatgttaaactCATTTAGAAAGCGTcggtatattttttcatga ttccCTTTAGAAGTTCTgtggcaaatttttttgcttgcgagtcaagcAAA TGATATAGTGCTCTCTTAAAATCTTTAATACGCATTTTGGCTGGAGGCTA GTGTGACTGATTGTCCTTATAGTTTTATAATGCATTCAAGGTTTCCatga ttttcataaaaaatatatttgtcaTTGGATTCAAAATGATCCTAATGATT TTCTTTGTTGGGTTTCTTCAAAACATAAATTACATCATAGTTCAAACCCT GCTTTCTTAAGAAGGGGGATGACaacttccaaaaaaaacaaagaagggGA TTTGGAAATCCTCCTCAAAAAGGGGGGATAACAAGAAAGGGGGATCCCTT TGGAAGGTTGATCGTTATgaagtcttctttttcttaccATGATTGAGTTT TTCTctatatttttgtaatttaaatgagaaaatttgCTCAATTTACAAAG TACTTTCCTGTTTGCAGGCAATTTGAGTCTGGTATTTGAGTGTTACACAG TGttattttccaaaatcaaaaagccCAAGAACCTTaaaggaaaaagattt ttaaaagttgaGGGGAAGTCTAGagggggatcatttaagaaggggatCAG ACTCCCTCTTGCACAAtgcatcaaaaaactttttatcttTAGATCTAATc agatttgaaaaagaaatgattCAAAATTTGCAGAAATGAAATTCTGCAAC agttgaaaaaatattgaacccCCTAAATGGATACAAATAATTGTATTGTG CTTTGATCATTTTTAGGAACTCTACTTGATCATGAATGGGATCAGAGCAG AAGAAACGCTGTCACTCCAATGACACACTTATTTCTTGATGAAAGTCTCA ATATTGGTACCAATTCAATTGTTAGATCAGGTATATAGCTTCACTTCAAT GAACAAATCACAATAAATTGATATCCAGTTGTTTACTAGGTTCTTATTTC TAAAATACTACTGTACTCTGATTCTTATTGTTTAGATTGTTTTATTGATT CTTTTGATTTCTAATGAggaataccttaaaggaagaaattttggcgggaa gaaaatttggcggatttggtcaaaatccgccaaattaagttcacCCCAAT TTCcgtcatccaccaaattaaatccccactAAATTTAAGTTGCTTtattt attcccccaaatgtgtgctatttcaggctttaaaacaggtttttcctttt tttaatggcgttttattaaattaaaattcccATCAAAATTCCTTCCTTTT TAAAATGTATCAGAAAAGCCGTTGCACTTGTTATTCTTTATTTCTATTGT ATAGTAAATTCAATGAGATATAGATTATTTGTCATGGCTCTTTATCATGA GCACAGACATCGTTGAATTGTCCATATCCATTCTTTTCAGCATTTTCTTT CATCATTTGACTTTTTAGGAAAAGCAGCTGTTTTGATTAATTTGAGTTTC TATGAGCCTTCTACCTCATTCCGCTGCATGAATGAGATTTTTGAACTTAT GATGATGCCAGAACTATCCAACATCTTCAGAAACCAAAACAACGAATTGA AGCAACATCTTGTGAATATAGTGGATAATGGTCCAGGTGAGCAACCATCA AGCCCACTCATTCAGATGCTCCTGGTGAGACTGAGGAGATTTATGAAACT TGACAGTGCATGTCAAGTTTCCTATGCTGAGTATCACAGCAAAAGAAACT TTGTTGAGAGGGTTCATGCTGAAGAAAACAAGGCTCTTTCCCGCCATGGC CCATTTTCAAGTACAACCATAAACAGCACAAACAAGCCTAACACAAAGGA GCATCGAGAAAACATGGAGGCCATGGCTGAAGAGGTGATACAATGCATAA GGACAGCCAGCTTTGGAAACCTGTCAGTTTCTTGTGAGAGAGGTTCAACC AAAAAAGACATGGTCTTCAATGATGAAGATAAATTGAAATCATTCCTTGG TATGTCAGAGTCAAACAAAATGCAGTTCACAGACTCTTATGAAATTGTAA GATCGCCATTTACAAGGGATCTTTGCCTATCTTGGGGTCTCGATGAAAGT TTCAAAGGTTCCTATTACGATGACTACATGGAGATCCAAAACTCATGGAA AGACAAATATACGTTCATAACAACAACATCAGAAAATTTCAATCCAAAGC AACCGATTCCGGACTATGTAAGATGGTTTGAAACAAAAGGAGAGCTACAC TACATGACACCAGAAGCAAGAGAAGAATTGGCAGATGGGGTTTGGGATGA CACACCATCGCTATTCTTGCCAACAGACATCTTGGACATGGCATTTGATG TATTGTACTATCCTTTAAATTTGTCCGAAGACTCCATCAAAGCGATTTCC TTTCTTGCATGGTATGTTTATTATACaacattcaaatttttctgatttac tTTATAAGCAAAGTTGTTTTTTTAGTTATTTTAAGTCTTTTGTCCCTATC AGCAAAAaagaattaaaggttttgtacTTTAACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073159TCONS_00073159Clytia hemisphaericatranscript
TCONS_00073160TCONS_00073160Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073160-proteinTCONS_00073160-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_87supercontigscaffold_87:22655..30239 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.11 0.21 0.17 0.42 0.2 0.36 0.5 0.18 0.17 0.11 0.18 0.48 0.61 0.14 0.15 0.12 0.09 0.16 0.14 0.23 0.29 0.07 0.1 0.11 0.13 0.35 0.23 0.15 0.15