XLOC_045746 (gene) - C. hemisphaerica

Overview
NameXLOC_045746
Unique NameXLOC_045746
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_97:622749..633203+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045746 ID=XLOC_045746|Name=XLOC_045746|organism=Clytia hemisphaerica|type=gene|length=10455bp|location=Sequence derived from alignment at scaffold_97:622749..633203+ (Clytia hemisphaerica)
GTAATTGTACATTTCCGTATAACGGTACCGGATGTCAGTATCACGTATGC
GATATAGCGTTTCCTTGTCATAATGGGACCTGCATGAAAACCCATGGTGG
CTTTCAATGTCAATGTAACCCTGGTTTCACCTCCCAAGATTGTTCAACAG
ATATAAATGAATGTTTAGTAGATGATGTTTGTCAGAATAATGGAGCATGT
GTGAACATGGTTGGTAACTTTTCTTGTGTTTGTGGAGAGGAATATACTGG
CCGACTTTGTgagaagaaaattgaatattgtaATAGCACAACCTGTTTGA
ATGGTGGTGTTTGTATCAATGATTATGTGAATCATAAATTCAAATGTATC
TGCAATGGAGATTACACAGGATCGCAATGTGATGCAAAGGTATGAAAACC
TTTTAAATGTTTGATTAAGACcgtgttcagacgttacggttccgtttcgc
tccgaaacgaaacggttccaaaacaagtgtgaacgtcaaaattcgaaacg
tcaaaaaagaagacgttacacagcaaaacagatcgaattGGTTTCACTCC
ACTATATTCATCGGAACGGAgctgctccgaaacgttccgaaactaATATG
AACACTATCTATCCGTAACAAAAATCACACTCTTTTATCTCGACGGATTT
TCGCCTCAGTGAAGTTTAAAAGGGGTTTTCATGCACCAATTCTGCAGAAA
TTTGCAAGAATTTGAGGGATTGAGGCTAATTTGTTCCCTTTTTGGTCTCA
GACGAAAAACTTTGATCACGGTTTTAAGAGCTATTTCCTATTTTCAATGA
ATATTGATTCTTTTTAAATAGCAACAAGATATACTTTAGTTGTTAAAAAA
TCGGCCAAATATTAGTTACAGTATATTATATGCTTCCAATTATGTTCAAG
TTTAAGTtccaaaaaattataagaaaataaatataagAGTTTCTTCTATC
CGTAGACACGTGTTTCGTCCTTCCAAAGACTCGTCAGTGCGGCTCGGGTA
AGAGAGCATAGACTGTTGTTCTCCccagagtgctcaaaacactaagTGTT
GAGCTTCACATAGTCGCTTGTGGTGAATGGAGAAGCAGAGTCTATAAGGT
GCTCAAAGAACCAAAGTTCTGAGCGTAATAaaagaatttcttcaaatttt
caggTATCTATTTGTATCAATCAAACTTGTAACCATGGAGATTGTTTCGA
CCACAATAATGGCTCATTTTCTTGTCATTGTAATTTTGGATTCTTTGGTG
CAAATTGCCAGCAATTCGAATGTCCATGCTTTGAAGATGGTGGTCGATGT
GTTCGGGAGAATGCCAGTGAACCTTATCAATGTCTTTGTAAAGTAAGtgg
ttttttgaaaacttttctttacacgttttttattggaacccagtttataa
gaacatttacgctgaaattttggtaaaaatatgTACATCGTAAAAACATG
ACCAGATTTCTTCGACTTAAGgaccaattttttttatatccaAAAGTAGT
TTTGTATATTCAAGTGAATTAATTTCAAGGCTccaaattgtcaaaaaata
agcAGCCAAAATTGTAAAGGCTTGgcgacacgagaagtttttctTGCGTT
GGCGCAATGCAactagccagtaccttcccacaaaccaaattttttctttg
ttttatggtcagttacaCTTTGAAGCGCTTTTCGAAAGTTATCGCACTGT
GGTGGAGGGTGACGTCGATCCCGTGCGGAGTGCATAAGGGCGGGAAAACA
CGGAACTCGAAAATAAAGACTGGAACGGACAATCGAATAGGTAAGAGAGG
ATGTGCGTTGATGTTCAATCTAGTCTCAATTTTTGAGTTCCGtgcattaa
aatcaaaacaaaagaatcctcggGATCGGGATGGAGTTTGGTGAGCTGAA
AATGTTTTTTTTTGAAATTATTTTGATACCCCCCTATTATAGTTATTATA
ACGAAAGAACtatagaagcaaaaaagtttccaaaggTCTTCAAGCAGCTC
CAATTAATGGTATTGTCAACAGGCTCTTAATTTAGAAAGGTAATGAGATA
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NNNNNNNNNNNNNNCTGTTGACAATACCATTAATTGGAGCTGCTTGAAga
cttttggaaacttttttgcttctataGTTCTTTCGTTATAATAGGGGTGt
atcaaattaataaaaaaaaaaacattttcagctcACCAAACTCCATCCCG
ACCCtgaggattcttttgttttgattttaatgcacggaactcaaaaatta
agacTAGATTGAACATCAACGCACATCCTCTCCTACCTATTCGATTGTCC
GTTCCAGTCTTTATTTTCGAGTTCCGTGTTTTCCCGCCCTTATGCACGCC
GCACGGGATCGACGTCACCCTCCACCACAGTGCGATAACTTTCGACAAAC
GCTTCAAAGtgtaactgaccataaaacaaagaaaaaatttggtttgtggg
aaggcactggctacaatgcaacatgctccatcccaccaacacaagaaaaa
aagcgtGTCCCACGGtttcttattttatttcatgggacaaaaagtgaggg
aaatacccaaaagacacgctgattttttCCCTGGGACAAAgttgagattt
cacttttattagtAGAAAGACAAAtagggtggagacacgagaaagcgttt
caggttggtgggatggagcatgttgccttaagacgttctaataaaaaagc
gtgtatttaaagttaaatgatttcttttaaaaactacCTTCCAAACTTGG
CACCAAACACTAAACAAAGATAGCGTTTCAACGGATTGAATTATTGGTAA
TGGAAAATGTATGGAGTCCATTCATTAATAGCATTACATCTATCAACCCG
CCCTCAGCGGCGCGGTCGGCTTTTTTGGggactggtaatgaatttacaag
gaagATTTATTCTCGGTGCACAGCATTTTTAGGCTACAACTAAATCAAAC
CAAGAAAATTGCTGTCAGAATTTTAGATGTATTTTCTTGAGTCTCTGAGG
TAGAGCGCAAACTATTTTTAGGATTCGAATTACTTAACTATATTGACGTT
ACTTAATTACCCTTCAACGCTAGTGTATATAACATCTTTTACAAGAGCGC
TCTTACGCTTGTGTTTTCGATATCATCGTCGCGGAgaattttccttgtat
tttcgtTACCAGTCTCCTCAAAAGCGCTAAGGGTTGATCTAAGTAGGTGA
ATTATATGCGAGTAAAACTTTAATATGAGACCGTAAGACAGAATGATATA
ATATATGTAATATGTTATCggcagttgcgagtacaataggaaaaatattt
tacgagttccgagatttttccgtaaaaTATAcagaaaatccggaacgagt
gaaatatttccatattgtacgaggaAATGTATGCTAACTGgcttatcggt
gacccaaaaaatacactttttgtgttggaaaaaagcgcagggcacttttg
tagaaAATTGACGTTAGATTGccgctaccgctacaatgcaacaacatctt
ttcgtcaatttatactTGGTACATGTAAAATACGAGATATATTGTACTgt
tttttttaaccaatcagattgcagatattggATCGCTGATAGTAACAAAA
ACTGTTTTCTATTACTCCAgtggccgggtagctcagtcggtagagaattc
gccttacaatctaaggttTGTGGGTTCGATACCCGGTCACCGCcgggtaa
gttactgggagctgatagtaggtgtggcgctccacctcagcattcgatct
cccaggtctagtgcaaatagaaaaggggatagactccctcactcccggct
ccgccgacagccaccagattgatatacttacttacttactattaCTCCAG
GCTGGCTTTACCGGAAAGTTATGTGACACATTCACAACAGATTGTCGTAA
CACATCAAAATCGTGTGTATTAGATTCATATTGCCAACAAGCAGATTATG
GATATGTTTGTGTATGTCCGCCACATCTACAAGGTGAAAGATGTAATAAA
CCAGGGTTGTGTTCTTATGAACCATGCAAAAACAATGGGACGTGCCTCTC
TTTAGAAACAGGTATGTTCTTATTTCACAACTTAGATAAATGATATATTA
CAATTACcaataaaaattaattaagtCTTCAACACTTGAGTTTTCGTTTG
AGAAAAcgacttcaaaatttttcatttcaaaatatcttcaaaattttata
acGTCAGTTTTAAGTCATTCGAATGTCTTGAGGAGTAAATCGGGCTCCGC
CTTGCGGGGCGTTTTTCGGTGCAACTACCCCCTGCGGAAATGACAACATG
CTCAGACAGACGGTTTTGAAATGTGTATACACCTATCAAGTATTACAGCG
TGAGGAAACTGGATTCGAGTTTACCAAGAAGGAATGACGTCAAAGTGTCT
GAAGTCGTTACATTAACGTTTTCAATGACAAcgcattaccgagtttatgt
atgtgtgtttttctgcgacggagacggtaaggttctaatttgactagatc
ttgaacaactgaggacgacggtaaaccAGCACTTTTCCTGTCCTCGATAT
TGCGgatcagaactgcgggttattccaaaacgcttcagtcactctaccgt
catcaaaagtgcaaatacataaactcgctattatgacgtcatttgctTGT
AAATTCATCACCAGTCCCCTCAGATGTTGAGCGCACAATCAAGGGTTAAT
AGGTgtattagtatatgtaatcacatgataatgAGTGCAATTCAAGAATA
ATTGAAcggttgatttttttgttattaattttccgagtctgaaaggacga
ggaaaattcgaaacaaaaaaatcacgagtgcaattttcgaattgtacgag
ttatcatgtgattacgagctaatcgcacaatcgGTTTCACTGCTTTTTCC
CGTCAGAAAAGTAAATTACAatgaaagttttatatttttctcttctcttt
atgtaattttcttttattgCTGCTTAtggattttctttctcacaaaatta
atttcgaatgcaattaaaatgttCGATaataaaaatgtaagaaaaaacat
tgaaatcaattttgtaaacattggcccgcgtcattgaagagtgtgattaa
cgattaattgctctctacaggatgcaattaacgattaattgctctctttg
aaggggcgccaaatgaggaaaaataactcatcgtgcgattacctttataa
ttttttaagaaagaaatacagttaactctctctctctaattcgatctaaA
AGGGAGCAAAATATTNAggaataatcagatggtctAAGATTTTTTGCCTA
AGAAACCCTCTGTGGTTTTGAATAAAATCACCAAGTATTTTTGTCTAACT
ATTATTCTAAGGTTGAGATATCACGATTTAAGATTTCTGAAAATGGGTTC
Tcacacggttcttacgttgaaattctattgttttttacttaaagtcaaaa
acttttaacTTAATTATCTCGACTTATTTGgggaaaaatatttcgagttt
tTGCGTTAAGGACAATAGAAGGATCCCACATACCTGATGTCTCAAACCAC
TCtgattacatgttttttctttataagcattgcgcttataagcataacta
ggctcatatatggcaaaaatttaagcatatgctaaacaTTACCTTAAGCC
TTCATACtcagaatttgttttttttttgactggaatttgacggattttcg
aaatttctctaaagcatttttcagctttgtaaaCCTCTCGATCGAAGCAT
TTCCGAGCCAGCTTTtagatttttgtatgcttataaaagaaacatgtatc
cctttaatctttatatttttacaGGAGGTTATCAATGCTTGTGCAATGAG
GAATATACTGGCAACCAATGTCAATACGATTTGAACGAATGTTTATCATC
ACCATGCCAACATAATGGTAGATGTGCAGAAGATGGGATTGGTTCGTTCA
AATGTTATTGTCTTGAAGGTTATAATGGTACACAGTGTGAANTTGGTTCG
TTCAAATGTTATTGTCTTGAAGGTTATAATGGCACACAGTGTGAAAAGAG
GCTTAATCCTAACAACAGTGCAACTAGCTTGTTGGTGATTGGTTCCAGCT
CCAATGAACTTATCATGACTCCAACAATAGAGACTACCAAACACATGCAA
ACTTCAGGTAATGACAAATAATAATCATTGAATTGAAGTAAAGTATAGTA
TAGTACAACAATaatattggagaaaaaaaattgcgttcCCTTACTTTTTT
GCCCATGATTCTGCTTGGTTTGATATAGATACCAgagtaaaatatatttt
caagttGCCACGTTCGGCCTCTgagatatattcattttcaataGAATCCT
CACCCTTTTCTTTATTAAATAGTACCCATACTTCAAACATATACATCTCA
AGACATTCAACTCGCAACAACCACAACGACTACACACAATACAACGGAAC
TAACACCAGCACAGTTAACGACATCTTTACAACAAACGCCAGTAATGACA
CCAACGGCAACGCTCCCAAACNAACTAACACCAGCACAGTTAACGATATC
TTTACAACAAACGCCAGTAATGACACCAACGGCAACGCTCCCAAACGTCC
GATCTACACTTGAAATCCTACAAGAAAAAACCTCTATActtcaattttca
atagaaacgCTACTGGAACAATCTACGAATAAAATCGAATCAGCACCCTC
ATCCGTATCAATTTTTCCTGGAAACATTTCCTCTAAACTGGAAATACTTT
CGTCATCAAAGCTACACAAACTCTCATCCTCTACTAGTAAAATTACATAT
CCAAAGACTACGTCAAAATCAAGCGACATTTTATCCACTAGTGATATTGA
TTATAGTTCATCCACAAAATTGCCAACTGCTATTTTATCGCCTGACCATA
TTTTACCAACTTTATCAGTATCACTATCCTTAAAACCTACTTACATCATG
AACACGAACTCCAAAGCTCTACAGTCGACTAAAACTCTGGAAAGTATCTC
ATATGCACCAACGCAAAGAAACTCGTACTCGTCACCAATGACCCTTACCA
GCACTGACCAACTATTGGTTCAATCATCATTTGAAATCAACCCACTATCT
TCAACATCCTTTATACCAGAGATTTCAGATCTTGTAGAGTCTTCTAAACT
CAAAGTTCAATCATCAGCTGAAATGAAATCTTCGACATCCTTTATACCAC
CAGAGACTTCAGATATTACTGAATCTTCAAAGCTTAATTCACCACCAACA
AATACAAATATACAATCGTCTACAATTCAAACGTTGACGTCTGTGATCTC
ACCAGAGCTTAGTGAACCTTCATTAGTATCTCAAACAATACATCAAACAG
TCTCACTAAAGTTTACAACAGACTTATCAACACCGACAAACACTGACGGA
CAAACACAAACGATAAAACAGACATCGAATATACGTCCACAATCCTCATC
ACGGGACGCTTTGACAACAACTTTTCAAACGGAAACTactggtaaaatat
ttttctccattttcacTTTCCGTTTTACTATCAACAAGCGAACAACGAGA
ACAAGAACTTTGAAATGAGAAATTATCTAACCCACACTTGAAATATATCA
CTGACTCTAAGCTAGTAAGATTCTTAATACTCAAGCTTCTAGCAATAGGC
CCTTCCAGAAAATTATTCTACGGGGTTGTTGAGAAATTACGGCCGACTTA
TGTATTTCTGTAACTCCCCGGATATCCGATATCCGGACACCCCCATGAAA
TAATTTTCTGGACGAGCCCATGATGTATACTAGAGATGAACCCAATGAAA
TTCGTAATCCTCAAGCTTAGCAATGTACATTACACCCTaaaggctggtct
ccacttacacgcgcttcaatcgcactttttcgagcaaaggtttcacgcta
ttggtcaaaagacccCGTTTAcgtgatctgacgtaacggttgaaaaaaat
tttaaatgtattcaactttttttttcgagcgcgtgctacatttttatgat
gtaatcttaataccaagcaaaaaggattgaagccaaaaagtgcgattgca
gcgcgcgcaaTTGGAGACCAGCCTTAAAACACTATAACtgatgtttcatt
tttttacaGCACAACCAACGCACACCGAGACAACTCAATCATTCGTAACT
CAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073669TCONS_00073669Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073669-proteinTCONS_00073669-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:622749..633203 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75	0.57	1.08	1.29	10.94	8.22	4.96	5.01	2.89	3.01	2.99	2.8	0.67	0.7	0.17	0.19	0.82	0.6	0.94	1.1	1.17	1.11	0.35	0.75	2.66	2.58	1.31	0.87	0.27	0.39