TCONS_00000118-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000118-protein
Unique Name	TCONS_00000118-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	445

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000118-protein ID=TCONS_00000118-protein|Name=TCONS_00000118-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MHTNINKPYRFANFGKMMIILRWQWVLLILLLTIVQKAWTGKRTKALFSL
RESKTSDGKQTDVLLNKDKELDSLLQQTKENLIKAFGLRENMISNGDKIQ
KREPHKYMKYIAQKYKDNYKNGIPLTANTVRGCVDIDHGDKRLADFPHVS
FKFDVSEIPQSEILIQSELKVLMKPDSFGIRSIRNGFFRATVLGVVARNK
AENKAKGRHVYPKLWEITSKTIAMVKGQTEHWVTFDITKFVNYIINVQRK
HVKLVLRVKPLGGTSIDPKLMGLNNHIKLETEKGLLVIYSGEDEAPIVKK
NKRSKRHVSNTYTEKSNKKNRKKNKKNKNKNNKNRRKGKRRRKACRRKDM
EVDFDKFGWSNFLIEPSKQNIYYCHGHCRYPLPHYVPASNHATIQSIWHE
MHSSVPPPCCVPDEFDMLPVLSLDGNDRVVFKMKEGLIVKSCACR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000064	XLOC_000064	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000118	TCONS_00000118	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001839	TGF-b_C
IPR029034	Cystine-knot_cytokine
IPR001111	TGF-b_propeptide

Vocabulary: **Molecular Function**
Term	Definition
GO:0008083	growth factor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008083	growth factor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 315..335
None	No IPR available	PRINTS	PR00669	INHIBINA	coord: 345..362 score: 29.17 coord: 423..444 score: 28.98 coord: 362..379 score: 34.72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..345
IPR001839	Transforming growth factor-beta, C-terminal	SMART	SM00204	TGFB_2	coord: 345..445 e-value: 2.6E-37 score: 139.9
IPR001839	Transforming growth factor-beta, C-terminal	PFAM	PF00019	TGF_beta	coord: 344..444 e-value: 4.7E-24 score: 85.2
IPR001839	Transforming growth factor-beta, C-terminal	PROSITE	PS51362	TGF_BETA_2	coord: 321..445 score: 31.375
IPR029034	Cystine-knot cytokine	GENE3D	2.10.90.10		coord: 332..445 e-value: 6.4E-32 score: 110.1
IPR029034	Cystine-knot cytokine	SUPERFAMILY	57501	Cystine-knot cytokines	coord: 339..445
IPR001111	TGF-beta, propeptide	PFAM	PF00688	TGFb_propeptide	coord: 126..287 e-value: 1.8E-9 score: 37.6

Blast

[Close]

BLAST of TCONS_00000118-protein vs. Swiss-Prot (Human)
Match: BMP7 (Bone morphogenetic protein 7 OS=Homo sapiens GN=BMP7 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.908e-38
Identity = 91/324 (28.09%), Postives = 154/324 (47.53%), Query Frame = 0

Query:  127 ANTVRGCVDIDHGDKRL--ADFPHVSFKFDVSEIPQSEILIQSELKVLMKPDSFGIRSIRNGFFRATVLGVVARNKAENKAKGRHVYPKLWEITSKTIAMVKGQTEHWVTFDITKFVNYIINVQRKHVKLVLRVKPLGGTSIDPKLMGLNNHIKLETEKGLLVIYSGEDEAPIVKKNKRSKRHVSNTYTEKSNKKNRKKNKKNKNK---NNKNRRKGKRRRKACRRKDMEVDFDKFGWSNFLIEPSKQNIYYCHGHCRYPLPHYVPASNHATIQSIWHEMH-SSVPPPCCVPDEFDMLPVLSLDGNDRVVFKMKEGLIVKSCAC 444
            A+ V   V++   DK      + H  F+FD+S+IP+ E +  +E ++      +      N  FR +V  V+  +              L+ + S+T+       E W+ FDIT   N+ +   R ++ L L V+ L G SI+PKL GL      + ++  +V +    E      + RS R   +    K   +NR K  KN+      N        +R+AC++ ++ V F   GW +++I P     YYC G C +PL  Y+ A+NHA +Q++ H ++  +VP PCC P + + + VL  D +  V+ K    ++V++C C
Sbjct:  130 ADMVMSFVNLVEHDKEFFHPRYHHREFRFDLSKIPEGEAVTAAEFRIY---KDYIRERFDNETFRISVYQVLQEHLGRES--------DLFLLDSRTLW---ASEEGWLVFDITATSNHWVVNPRHNLGLQLSVETLDGQSINPKLAGLIGRHGPQNKQPFMVAFFKATEV-----HFRSIRSTGS----KQRSQNRSKTPKNQEALRMANVAENSSSDQRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGC 430

The following BLAST results are available for this feature:

BLAST of TCONS_00000118-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000118-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BMP7	3.908e-38	28.09	Bone morphogenetic protein 7 OS=Homo sapiens GN=BM...	[more]

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TCONS_00000118-protein (polypeptide) - C. hemisphaerica