TCONS_00001248-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001248-protein
Unique NameTCONS_00001248-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length370

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001248-protein ID=TCONS_00001248-protein|Name=TCONS_00001248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MFHRILRSLYKEQQRRANRLYSLWFTSNGNGVQKAITNAEKLVGYPTSYS
SLKYLAEEEPANFLGLAKKLVGSGHPLLSTARDLLSQDPHIGHHLGGLWV
LLLSKAAGSGDDLDVLQSELVNGIHQKQRAIADTTELINTAFLVHRSMVD
IVQSQSNQTLNLGNKLSVLGGDFLLAKASLELGKLENTKVVEMVSQAIGH
LSEGATIERTHSSFDDLKSWEDFIFLLRGSLLAHSCRSAVQVVGHPEKVC
EDAYNFGMNLALAQRCVEDIEVYQNNKKILTNSNFVLMLARNTSKEINEN
CKAIDHQEPDINSTKTLKNTIEQDMPDIVNKTRLHYEEHYLSRCRSSIEY
FPNANSVQAINDILSTLSQE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000668XLOC_000668Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001248TCONS_00001248Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domainGENE3D1.10.600.10coord: 44..369
e-value: 3.4E-33
score: 114.5
IPR008949Isoprenoid synthase domainSUPERFAMILY48576Terpenoid synthasescoord: 43..365
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 93..270
e-value: 6.3E-15
score: 54.8

Blast
[Close]
BLAST of TCONS_00001248-protein vs. Swiss-Prot (Human)
Match: DLP1 (Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 7.897e-48
Identity = 100/255 (39.22%), Postives = 160/255 (62.75%), Query Frame = 0 
Query:   34 KAITNAEKLVGYPTSYSSLKYLAEEEPANFLGLAKKLVGSGHPLLSTARDLLSQDPHIGHHLGGLWVLLLSKAAG-SGDDLDVLQSELVNGIHQKQRAIADTTELINTAFLVHRSMVDIVQSQSN----QTLNLGNKLSVLGGDFLLAKASLELGKLENTKVVEMVSQAIGHLSEGATIERTHSS----FDD--LKSWEDFIFLLRGSLLAHSCRSAVQVVGHPEKVCEDAYNFGMNLALAQRCVEDIEVYQNNK 277
            + ++ AEK+VGYPTS+ SL+ L  +E +N     +KLVG+ HPLL+TAR L+  D      L GL VLL+SKAAG S  +      ++V+GI+  QR++A+ TELI+ A LVHR +V++ + QS+    + +  GNK+++L GDFLLA A   L  L+NTKVVE+++ A+  L +G   E + S      DD  + +W++  FL  G+LLA SC++A+++  H  +V   A+ +G ++A++ +   D++ +   K
Sbjct:   51 QVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLV-HDSWNSLQLRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEK 304
The following BLAST results are available for this feature:
BLAST of TCONS_00001248-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLP17.897e-4839.22Decaprenyl-diphosphate synthase subunit 2 OS=Homo ... [more]
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