TCONS_00003356-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003356-protein
Unique NameTCONS_00003356-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length152

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003356-protein ID=TCONS_00003356-protein|Name=TCONS_00003356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=152bp
MDRFTEEQIREFEDAFCMFCKYDKQNNGYILSTELREMLKIVGFNPTDST
LETLTILIDEDGNGRIEFTELVDLIDKLETQEKALKEARDSFNAFDFLGE
GFVAANDLKEALFYIMEKASEEDKQNIVKHFKLEKNRKIEFEEFKEMIIM
KK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001856XLOC_001856Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003356TCONS_00003356Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..91
NoneNo IPR availableGENE3D1.10.238.10coord: 69..152
e-value: 2.1E-13
score: 49.6
NoneNo IPR availableGENE3D1.10.238.10coord: 38..68
e-value: 2.1E-10
score: 39.9
NoneNo IPR availableGENE3D1.10.238.10coord: 1..37
e-value: 1.5E-10
score: 40.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 12..74
e-value: 1.1E-10
score: 41.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 10..45
score: 10.859
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 119..152
score: 8.265
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 83..118
score: 7.372
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 46..81
score: 9.13
IPR002048EF-hand domainCDDcd00051EFhcoord: 14..75
e-value: 1.23468E-7
score: 44.0757
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..148

Blast
[Close]
BLAST of TCONS_00003356-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.531e-24
Identity = 47/150 (31.33%), Postives = 92/150 (61.33%), Query Frame = 0 
Query:    2 DRFTEEQIREFEDAFCMFCKYDKQNNGYILSTELREMLKIVGFNPTDSTLETLTILIDEDGNGRIEFTELVDLIDKLETQEKALKEARDSFNAFDFLGEGFVAANDLKEALFYIMEKASEEDKQNIVKHFKLEKNRKIEFEEFKEMIIMK 151
            D+ TEEQI EF++AF +F   DK  +G I + EL  +++ +G NPT++ L+ +   +D DGNG I+F E + ++ +      + +E R++F  FD  G G+++A +L+  +  + EK ++E+   +++   ++ + ++ +EEF +M+  K
Sbjct:    3 DQLTEEQIAEFKEAFSLF---DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of TCONS_00003356-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM35.531e-2431.33Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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