TCONS_00003443-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003443-protein
Unique NameTCONS_00003443-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003443-protein ID=TCONS_00003443-protein|Name=TCONS_00003443-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MTSSCLLIQLVTIFVVYVAMVSSEENPIQECMKGIDKQFQQLYLGIKKNP
CLKCVCNYEGQSQVCRIVRLKCKPLQCSIQEAQPKQCCRKCKGCTFKGRY
YNDLATWKDEEDSCRHYECHEGVVSETTPTCITNCANPVKVPGKCCPVCR
GCFHKGRLLSEGERTQDGTDVTCQCQNGTMSCQKTVCPFLHCSNPVKLAG
NRCPTCTRINQPVIINWKEPQCNIKDKTLNSGQSYKLNKCTTCYCQNGTV
FCQKEQCKVDKNCPPQDLIQSPKHCCPVCTTKLSCKYNGKSYKNLETWYL
PGCVQCQCNKGLTMCKKQICKKNLQCKDGYKPSFRPGSCCEQCLPETTTC
VGFGDPHYRTFDGKAYSYQGVCKYTLAKDCSSSQLFHIIGRNHARYTHHF
SWXPRNYSTSLVVTMLDTHTTSHGSKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001920XLOC_001920Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003443TCONS_00003443Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001007VWF_dom
IPR001846VWF_type-D
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001007VWFC domainSMARTSM00214vwccoord: 222..279
e-value: 7.9E-4
score: 28.7
coord: 152..206
e-value: 9.6E-5
score: 31.8
coord: 285..343
e-value: 1.2E-9
score: 48.1
coord: 94..149
e-value: 6.7E-7
score: 38.9
IPR001007VWFC domainPFAMPF00093VWCcoord: 222..279
e-value: 2.1E-6
score: 27.9
coord: 285..343
e-value: 1.2E-7
score: 31.8
IPR001007VWFC domainPROSITEPS01208VWFC_1coord: 303..343
IPR001007VWFC domainPROSITEPS01208VWFC_1coord: 240..279
IPR001007VWFC domainPROSITEPS50184VWFC_2coord: 283..344
score: 11.336
IPR001007VWFC domainPROSITEPS50184VWFC_2coord: 220..280
score: 10.226
IPR001846von Willebrand factor, type D domainPFAMPF00094VWDcoord: 350..391
e-value: 3.0E-11
score: 43.7
IPR001846von Willebrand factor, type D domainPROSITEPS51233VWFDcoord: 349..427
score: 17.092
NoneNo IPR availableGENE3D2.10.70.10coord: 93..125
e-value: 4.6E-6
score: 26.2
coord: 151..185
e-value: 1.1E-4
score: 21.7
coord: 222..254
e-value: 4.9E-7
score: 29.3
coord: 284..317
e-value: 2.7E-7
score: 30.1
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 200..280
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 86..151
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 281..346
NoneNo IPR availableSUPERFAMILY57603FnI-like domaincoord: 146..208

Blast
[Close]
BLAST of TCONS_00003443-protein vs. Swiss-Prot (Human)
Match: BMPER (BMP-binding endothelial regulator protein OS=Homo sapiens GN=BMPER PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 1.098e-55
Identity = 130/370 (35.14%), Postives = 183/370 (49.46%), Query Frame = 0 
Query:   46 IKKNPCLKCVCNYEGQSQVCRIVRLKCKPL--QCSIQEAQPKQCCRKCKGCTFKGRYYNDLATWKDEEDSCRHYECHEGVVSETTPTCITNCANPVKVPGKCCPVCRGCFHKGRLLSEGERTQ-DGTDVT-CQCQNGTMSCQKTVCPFLHCSNPVKLA--GNRCPTCTRINQPVIINWKEPQCNIKDKTLNSGQSYKLNKCTTCYCQNGTVFCQKEQCKVDKNCPPQDLIQSPKHCCPVCTTKLS------CKYNGKSYKNLETWYLPGCVQCQCNKGLTMCKKQICKKNLQCKDGYKPSFRPGSCCEQCLPETTTCVGFGDPHYRTFDGKAYSYQGVCKYTLAKDCSS-SQLFHIIGRNHARYTHHFSW 402
            I  NPC+ CVC    +   C+  R KC  L   C++   Q   CC +CKGCT++G  YN    W+   + C   +C EGVV+E+   C+ +C NP++  G CCP C GC  +G    EGE  Q +G+  T C C  G   C + VCP L C   +     G  CP C  + Q  + +     C  +    ++G S+  + CT C C++ TV C++      K   P    Q  + CC  C  ++       CK+  K +++ E W    C  C C KG T C+ + C     C  G K   R G CC  C  +   C  FGDPHY TFDG+ +++QG C+Y L KDCSS +  F ++ +N AR T  FSW
Sbjct:   62 ITDNPCIMCVC--LNKEVTCK--REKCPVLSRDCALAIKQRGACCEQCKGCTYEGNTYNSSFKWQSPAEPCVLRQCQEGVVTESGVRCVVHCKNPLEHLGMCCPTCPGCVFEGVQYQEGEEFQPEGSKCTKCSCTGGRTQCVREVCPILSCPQHLSHIPPGQCCPKC--LGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKR------KCSHPGGCDQGQEGCCEECLLRVPPEDIKVCKFGNKIFQDGEMWSSINCTICACVKGRTECRNKQCIPISSCPQG-KILNRKG-CCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSW 417
The following BLAST results are available for this feature:
BLAST of TCONS_00003443-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BMPER1.098e-5535.14BMP-binding endothelial regulator protein OS=Homo ... [more]
back to top