TCONS_00003505-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003505-protein
Unique NameTCONS_00003505-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length814

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003505-protein ID=TCONS_00003505-protein|Name=TCONS_00003505-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MDINIIKKLKVVELKAALGERGLSTKGKKDDLVKRLVEAMEADEEPQQEV
ENEPEVAEEAMETGESSQQSDSNNQESEDKEAPTSSEQVEQVKEPEIEAP
VEEEFVPSSTTQAEPEASANSEAEPSESKTEDATPSDKPAEDWVLVEPPT
VDETSAVNDASTKQDEAVKESQETPVPESTSSADVEMKEDKKEETTESKT
AKAETDEVKAPEPKKEEPKEEEIQDAMVEVEVEEGEEFVLCEVADGKVGL
DQYSSDINLVISNNGLAASPLSKNGFSYLWAGARANRGVKGGKIGYEVKI
TGKKEVDLPETEILHHAIRIGWSAEHSGMQLGESSSSYGYESTGKVCASS
SFYTYGVTFGEGDVIGTYLDLESEPKSLKYTKNGEDLGVAMSLTINLDEK
PLFPHILVRNMSVELNFGDNETPFNETPEGFTLLQNGSEEQTVKMTSTRL
AEDEMPEVIMMVGLPSSGKTVWVKKYVDSNTDKLYNIVSVQGLLDRCKLE
GKSRRKDDKGFQELMTAAIKVLTKLYQLCPKRKRNYIYDQSNVYHKAQIA
KMEPFNEFKRKAVIIVPTHDNLRRRTSDAKRKNEIIHEVPFGDLCDMKCR
FNIPEKGELFDDVSFPELDEKNATKTVHDYHSDGQRAKRTGRDEYYPKKK
GRYEDRRSGDRRQYGSGGGRDYRRDDYNRYGSFGNRRDDRQGDKRRYDDR
RNSGGSNYGRQHYGSGGHHRNNSGGYNSGYGQNYGGYGQNYNASGQSYGG
YNNYNNYQYGNQAANRGQSWQQGQPQYYVQQQGQQPQQQWGQWGNYYNTG
SGSNNYGSGSGYGY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001947XLOC_001947Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003505TCONS_00003505Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR003034SAP_dom
IPR001870B30.2/SPRY
IPR013320ConA-like_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 291..421
e-value: 1.2E-15
score: 68.0
IPR003034SAP domainSMARTSM00513sap_9coord: 6..40
e-value: 1.6E-10
score: 50.9
IPR003034SAP domainGENE3D1.10.720.30coord: 3..56
e-value: 5.1E-14
score: 51.6
IPR003034SAP domainPFAMPF02037SAPcoord: 6..39
e-value: 8.6E-12
score: 44.4
IPR003034SAP domainPROSITEPS50800SAPcoord: 6..40
score: 11.724
IPR003034SAP domainSUPERFAMILY68906SAP domaincoord: 7..43
NoneNo IPR availableGENE3D3.40.50.300coord: 455..610
e-value: 1.7E-4
score: 21.4
NoneNo IPR availablePFAMPF13671AAA_33coord: 458..603
e-value: 9.1E-15
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 624..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..223
NoneNo IPR availableCDDcd12884SPRY_hnRNPcoord: 248..421
e-value: 1.48128E-64
score: 213.213
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 228..422
score: 13.624
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 248..422
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 455..582

Blast
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BLAST of TCONS_00003505-protein vs. Swiss-Prot (Human)
Match: HNRL2 (Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens GN=HNRNPUL2 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 8.357e-74
Identity = 177/512 (34.57%), Postives = 263/512 (51.37%), Query Frame = 0 
Query:  248 VGLDQYSSDINLVISNNGLAASPLSKNGFSYLWAGARANRGVKGGKIGYEVKITGKKEVDLPETEILHHAIRIGWSAEHSGMQLGESSSSYGYESTGKVCASSSFYTYGVTFGEGDVIGTYLDLESEPKSLKYTKNGEDLGVAMSLTIN-LDEKPLFPHILVRNMSVELNFGDNETPFNETPEGFTLLQNGSEEQTVKMTSTRLAEDEMPEVIMMVGLPSSGKTVWVKKYVDSNTDKLYNIVSVQGLLDRCKLEG-KSRRKDDKGFQELMTAAIKVLTKLYQLCPKRKRNYIYDQSNVYHKAQIAKMEPFNEFKRKAVIIVPTHDNLRRRTSDAKRKNEIIHEVPFGDLCDMKCRFNIPEKGELFDDVSFPELDEKNATKTVHDYHSDGQRAKRTGRDEYYPKKKGRYEDRRSGDRRQYGSGGGRDYRRDDYNRYGSFGNRRDDRQGDKRRYDDRRNSGGSNYGRQHYGSGGHHRNNSGGYNSGYGQNYGGYGQNYNASGQSYGGYNNYNNY 757
            V LD Y+SD++  +S +     PL    F  LW+GAR+  GV  GK+ +E K+T    +    TE+    +R+GWS + S  QLGE   SYG++  G    +  F  +G TFGE DVIG + + E+E   L ++KNGEDLGVA  ++ + L ++ L PH+L +N  VELNFG  E PF   PE F  +     E+ V+ T+      E  EVI+MVGLP SGKT W  KY   N +K YN++  + +L++ +++G +    D K    L+  A + L+KL Q+  + KRN+I DQ NVY+  Q  K+  F  F RK V++VP  ++ ++R     RK     +VP   + +MK  F++PEK +  D+V++ EL+++ A   V  Y       K   R    P +K          R +     G+ Y                   G +R YD+R       YG+Q++G  G    N GGY + Y +  G Y + Y   G+ Y  YN Y +Y
Sbjct:  246 VNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEV--SLLRVGWSVDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFWISKDSLADRALLPHVLCKNCVVELNFGQKEEPFFPPPEEFVFIHAVPVEERVR-TAVPPKTIEECEVILMVGLPGSGKTQWALKYAKENPEKRYNVLGAETVLNQMRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWKKRLE--LRKEVEGDDVPESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKY-------KEEARKLLPPSEKRTNRRNNRNKRNRQNRSRGQGY-----------------VGGQRRGYDNR------AYGQQYWGQPG----NRGGYRNFYDRYRGDYDRFY---GRDY-EYNRYRDY 714
The following BLAST results are available for this feature:
BLAST of TCONS_00003505-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HNRL28.357e-7434.57Heterogeneous nuclear ribonucleoprotein U-like pro... [more]
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