TCONS_00003527-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003527-protein
Unique NameTCONS_00003527-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003527-protein ID=TCONS_00003527-protein|Name=TCONS_00003527-protein|organism=Clytia hemisphaerica|type=polypeptide|length=122bp
SDWWYAVLASAQIPAIFTVLIWGPISDAIGRKKAMIVIPIVSILQNIIFV
LCSHFMSSHVIFLCIGMLLACLFGELPGVIALSCSFIADVTRGKKSETRI
ARMAFVEFSINLAGIPAGLFGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001969XLOC_001969Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003527TCONS_00003527Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..122
e-value: 6.4E-9
score: 34.8
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 3..71
e-value: 3.8E-5
score: 22.6
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 5..122

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003527-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top