TCONS_00003639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003639-protein
Unique NameTCONS_00003639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003639-protein ID=TCONS_00003639-protein|Name=TCONS_00003639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MAKIDDDLKVLMVDKRQVSDPVAHAEWAAKKLCWVPDEEQGFVAASILKE
EGDKIVVKYDAGKQATFHKDDIQRMNPPKFDKVEDMADLTCLNEASVLHN
LKDRYFSDLIYTYSGLFCVVVNPYKRIPIYTDKVVASYKGKKRYEVPPHV
YAIADNAFRSMLGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002021XLOC_002021Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003639TCONS_00003639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004009Myosin_N
IPR001609Myosin_head_motor_dom
IPR008989Myosin_S1_N
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016459myosin complex
Vocabulary: Molecular Function
TermDefinition
GO:0003774motor activity
GO:0005524ATP binding
GO:0051015actin filament binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016459 myosin complex
molecular_function GO:0051015 actin filament binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004009Myosin, N-terminal, SH3-likePFAMPF02736Myosin_Ncoord: 30..69
e-value: 1.6E-15
score: 56.5
NoneNo IPR availableGENE3D2.30.30.360coord: 34..73
e-value: 4.0E-15
score: 54.8
IPR001609Myosin head, motor domainPFAMPF00063Myosin_headcoord: 83..162
e-value: 1.0E-35
score: 123.0
IPR001609Myosin head, motor domainPROSITEPS51456MYOSIN_MOTORcoord: 81..164
score: 44.206
IPR008989Myosin S1 fragment, N-terminalSUPERFAMILY50084Myosin S1 fragment, N-terminal domaincoord: 28..62
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 52..162

Blast
[Close]
BLAST of TCONS_00003639-protein vs. Swiss-Prot (Human)
Match: MYH11 (Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 3.688e-73
Identity = 111/162 (68.52%), Postives = 137/162 (84.57%), Query Frame = 0 
Query:    2 AKIDDDLKVLMVDKRQVSDPVAHAEWAAKKLCWVPDEEQGFVAASILKEEGDKIVVKY-DAGKQATFHKDDIQRMNPPKFDKVEDMADLTCLNEASVLHNLKDRYFSDLIYTYSGLFCVVVNPYKRIPIYTDKVVASYKGKKRYEVPPHVYAIADNAFRSML 162
             ++ DD K L VDK  ++ PVA A+WAAK+L WVP E+QGF AASI +E+GD++VV+  + GK+ T  KDDIQ+MNPPKF KVEDMA+LTCLNEASVLHNL++RYFS LIYTYSGLFCVVVNPYK +PIY++K+V  YKGKKR+E+PPH+YAIAD A+RSML
Sbjct:    5 GQLSDDEKFLFVDKNFINSPVAQADWAAKRLVWVPSEKQGFEAASIKEEKGDEVVVELVENGKKVTVGKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHEMPPHIYAIADTAYRSML 166
The following BLAST results are available for this feature:
BLAST of TCONS_00003639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYH113.688e-7368.52Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3[more]
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