TCONS_00003713-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003713-protein
Unique NameTCONS_00003713-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003713-protein ID=TCONS_00003713-protein|Name=TCONS_00003713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MADGCAKDELRISNSPEEEKLNFTRNRVPMFTFNTIKKGESFLHLKPYKQ
QIRGTPTNELKVAIPDSQSVQEKGFQCRHCTRSFSSKTGRANHENAHARK
NREESPATQNSTVEEVTSQPHANPVPPPQPQINHIWGNHAKEDIYQIFRA
MYSQIVLWR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002073XLOC_002073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003713TCONS_00003713Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60coord: 19..114
e-value: 8.3E-6
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..135
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..97
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..102
score: 10.325

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top