TCONS_00003719-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003719-protein
Unique Name	TCONS_00003719-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	450

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003719-protein ID=TCONS_00003719-protein|Name=TCONS_00003719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
MRFQLFFDNCLVLVSIFFYIQKCDGSHVKYKGCKVYQIEAKDESQIQKIK
RFIKSFPTQIDVWSDSPQHCQLMVTKEQSIKLDAYLSKENIQRKILIKDV
QKAIDKELEDNDERVKQNVYSAFRRRRIFNYKRFNRFFDILHELKRLQCR
FKKKMEIMEIGRSYERRPLVVVKITKNVLNECISNKKIVWIDGGVHSREW
ISVAGAMWMIKELLISKKASIQKLLETHVFYIAPVFNPDGYEYTFTDDRL
WRKTRRPTNKKGCIGTDVNRNWNFKWGLDEKNKEPCGLTYHGEKPESEIC
VQHFARLFRYIQPRLLSYWTLHSYGQLVYVPYSYTSEFSPYVSDLIQALF
VFREKAKSRNNQFYGLGTTHVLENGLLLFGTSIDYIHGALNITYSFNVEM
RPSEATLGQNQNPTELFLLSPKSIVPASSEVFDGIIGTVEHIYGRTENQV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002079	XLOC_002079	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003719	TCONS_00003719	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000834	Peptidase_M14
IPR003146	M14A_act_pep
IPR009020	Peptidase/Inhibitor_I9

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004181	metallocarboxypeptidase activity
GO:0004180	carboxypeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004180	carboxypeptidase activity
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000834	Peptidase M14, carboxypeptidase A	PRINTS	PR00765	CRBOXYPTASEA	coord: 319..332 score: 37.09 coord: 265..273 score: 56.62 coord: 187..201 score: 35.26 coord: 160..172 score: 47.78
IPR000834	Peptidase M14, carboxypeptidase A	SMART	SM00631	zn_carb	coord: 134..430 e-value: 1.2E-65 score: 234.1
IPR000834	Peptidase M14, carboxypeptidase A	PFAM	PF00246	Peptidase_M14	coord: 143..432 e-value: 2.7E-59 score: 201.3
IPR000834	Peptidase M14, carboxypeptidase A	PROSITE	PS00132	CARBOXYPEPT_ZN_1	coord: 187..209
IPR003146	Carboxypeptidase, activation peptide	PFAM	PF02244	Propep_M14	coord: 36..107 e-value: 4.4E-11 score: 42.9
IPR003146	Carboxypeptidase, activation peptide	GENE3D	3.30.70.340		coord: 30..116 e-value: 4.4E-17 score: 61.6
None	No IPR available	GENE3D	3.40.630.10		coord: 129..446 e-value: 1.0E-52 score: 178.6
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 129..442
IPR009020	Protease propeptides/proteinase inhibitor I9	SUPERFAMILY	54897	Protease propeptides/inhibitors	coord: 28..109

Blast

[Close]

BLAST of TCONS_00003719-protein vs. Swiss-Prot (Human)
Match: CBPA6 (Carboxypeptidase A6 OS=Homo sapiens GN=CPA6 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 1.324e-55
Identity = 134/446 (30.04%), Postives = 218/446 (48.88%), Query Frame = 0

Query:   11 LVLVSIFFYIQKCDGSHV---KYKGCKVYQIEAKDESQIQKIKRFIKSFPTQIDVWSDSPQH-------CQLMVTKEQSIKLDAYLSKENIQRKILIKDVQKAIDKELEDNDERVKQNVYSAFRRRRIFNYKRFNRFFDILHELKRLQCRFKKKMEIMEIGRSYERRPLVVVKITKNVLNECISNKKIVWIDGGVHSREWISVAGAMWMIKELLISKKA--SIQKLLETHVFYIAPVFNPDGYEYTFTDDRLWRKTRRPTNKKGCIGTDVNRNWNFKWGLDEKNKEPCGLTYHGEKPESEICVQHFARLFRYIQPRLLSYWTLHSYGQLVYVPYSYTSEFSPYVSDLIQALFVFREKAKSRNNQFYGLGTTHVLENGLLLF--GTSIDYIHGALNITYSFNVEMRPSEATLGQNQNPTELFLLSPKSIVPASSEVFDGIIGTVEHI 442
            L L  +F  I +   SH+   +Y G KV +   K E +   +K+   S+  ++D+W  S            + + +  S  L A+L + NIQ K+LI+D+QK ++K    + +R ++++         +NY+ ++   +I + +  L       + +  IGRSYE R L ++K+ +         K+ VWID G+H+REWI  A   W +KE L++ K+  +++K+L    FYI PVFN DGY +++T+DR WRKTR   ++  C G D NRNW  KW  +  +  PC  TY G  PESE  V+  A   R  +  + +Y + H+Y Q++  PYSY     P    +  A +    KA +     YG+   +   +  L    G+S+D+ +    I Y+F  E+R +    G        FLL    I P  +E    +     H+
Sbjct:   15 LPLCWLFLKILQPGHSHLYNNRYAGDKVIRFIPKTEEEAYALKKI--SYQLKVDLWQPSSISYVSEGTVTDVHIPQNGSRALLAFLQEANIQYKVLIEDLQKTLEKGSSLHTQRNRRSLSG-------YNYEVYHSLEEIQNWMHHLNKTHSGLIHMFSIGRSYEGRSLFILKLGRRS-----RLKRAVWIDCGIHAREWIGPAFCQWFVKEALLTYKSDPAMRKMLNHLYFYIMPVFNVDGYHFSWTNDRFWRKTRSRNSRFRCRGVDANRNWKVKWCDEGASMHPCDDTYCGPFPESEPEVKAVANFLRKHRKHIRAYLSFHAYAQMLLYPYSYKYATIPNFRCVESAAY----KAVNALQSVYGVRYRYGPASTTLYVSSGSSMDWAYKN-GIPYAFAFELRDT-GYFG--------FLLPEMLIKPTCTETMLAVKNITMHL 432

The following BLAST results are available for this feature:

BLAST of TCONS_00003719-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003719-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CBPA6	1.324e-55	30.04	Carboxypeptidase A6 OS=Homo sapiens GN=CPA6 PE=1 S...	[more]

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TCONS_00003719-protein (polypeptide) - C. hemisphaerica