TCONS_00003794-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003794-protein
Unique NameTCONS_00003794-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length471

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003794-protein ID=TCONS_00003794-protein|Name=TCONS_00003794-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MDCESIVEVEQESNGDIITTDDLVTKYKGRFVKSRDHDINYQSTSSCLVT
GDQAKSFYDTIINTTSSKRKDGKKKKRKRSSRNSKSVSESVPFSLDAVKK
YVATLFCLCENRKNVKDLKSHLRALSTNRDFHKFINSSDQYGWSALMSAS
ASNNLEAVKLLINYGARYRNLSDKAGNSVQDICKRNDALDVLNYLASLEE
DSKRMIKNEFPNDEDGPNIPTNKSGSSRSGVRSDDCSISGTNTVNRSNSK
HSSFSRNKKPSGNAPTDSCTFTRSSRTYTAINDSNERPCSSQDIDDVSTN
SWSEAADIRMSSVSNNDEETCELCGVSFPTSFKKQHETSMTHLLKDTSKT
LPDSSYTIPEHNVGFQMMLRTGWEQEGLGPDGAGRKKPIKTVLKLDKSGL
GLHKTKERVSHFAAFEEKAIGKRTHDDIMKTERRKRKGKSGTDGNLSQWK
QQKKKSRFWERDLRRYMSSND
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002111XLOC_002111Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003794TCONS_00003794Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 358..403
e-value: 2.7E-9
score: 46.9
IPR000467G-patch domainPFAMPF01585G-patchcoord: 362..401
e-value: 9.8E-9
score: 34.9
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 360..405
score: 11.655
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 141..173
e-value: 0.0069
score: 25.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 141..173
score: 9.19
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 79..206
e-value: 2.2E-11
score: 42.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 135..173
score: 9.516
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 135..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..471
NoneNo IPR availableCDDcd00204ANKcoord: 135..210
e-value: 1.54148E-7
score: 48.1486

Blast
[Close]
BLAST of TCONS_00003794-protein vs. Swiss-Prot (Human)
Match: GPAN1 (G patch domain and ankyrin repeat-containing protein 1 OS=Homo sapiens GN=GPANK1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.787e-18
Identity = 60/153 (39.22%), Postives = 78/153 (50.98%), Query Frame = 0 
Query:  321 CELCGVSFPTSFKKQHETSMTHLLK-DTSKTLPDSSYTIPEHNVGFQMMLRTGWEQE-GLGPDGAGRKKPIKTVLKLDKSGLGLHKTKE-RVSHFAAFEEKAIGKRTHDDIMKTERRKRKGKSGTDGNLSQW---KQQKKKSRFWERDLRRYM 467
            CE C   F  S    H TS  HLL        P+    +P  + GF+++LR GWE   GLGP G GR  PI TVLK D+ GLG     + RV+HF A++ +A+  R        ER  R         LS W   +++++K R WERDLR YM
Sbjct:  218 CENCDTHFQDS---NHRTSTAHLLSLSQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEGRANPIPTVLKRDQEGLGYRSAPQPRVTHFPAWDTRAVAGR--------ERPPRV------ATLS-WREERRREEKDRAWERDLRTYM 352
The following BLAST results are available for this feature:
BLAST of TCONS_00003794-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPAN11.787e-1839.22G patch domain and ankyrin repeat-containing prote... [more]
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