TCONS_00003797-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003797-protein
Unique Name	TCONS_00003797-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	610

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003797-protein ID=TCONS_00003797-protein|Name=TCONS_00003797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
MYGSYIMDKGGQTKRQKISSEMDTKTEAHADSIDVQSPLMGQKVESEKSG
AKQSKDELLYRIDKDPSWPLAMLLGFQHYLTMFGATVGLPFALAGALCLG
NNSTIVGELISTLFFCSGLVTLLQSTFGVRLPIVQGGTYTFLAPTFAIMG
ARTTSCFTTVIVNATTNATASIPDPEEWKSRITEIQGAIMVSSLFQIVIG
FSGIMGFVLRYIGPLTICPTIALVGLPLFGVAGNFAGTSWGVTFVTMFCI
TLFSQVLKEVRLPNPFGDPIPVFKLFPVLLAIIVSWALSAILTAAGIAES
DKARTDYRIDVLRESDWFRVPYPGQWGTPTVNVAAVFGMLAGVLASMLES
IGDYYACAKLSGAPPPPKHALNRGLGFEGLGCLITGAWGTGNGTTSYSEN
ISAIGITRVGSLRVIRCGAMIMIVLSIIGKFGALFATVPDPVIGGIFIIM
FGMITAVGLSSLQYVDLSSMRNLFVLGTSLFFGMVIPAWIGENGKSIDTG
SSAVDQIIKVLLSTNMFVGGVTGFFLDNLLPGTKEERGIIKWKRSFDGDG
NSTGTTASIHVYDPPFIGSLFKHRVCKYIPFLPYYGNKSDVTMDNIEDAK
NGTVIGDEQL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002113	XLOC_002113	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003797	TCONS_00003797	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006043	Xant/urac/vitC
IPR006042	Xan_ur_permease

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006043	Xanthine/uracil/vitamin C permease	PFAM	PF00860	Xan_ur_permease	coord: 72..490 e-value: 9.4E-86 score: 287.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
IPR006042	Xanthine/uracil permease	PROSITE	PS01116	XANTH_URACIL_PERMASE	coord: 438..458

Blast

[Close]

BLAST of TCONS_00003797-protein vs. Swiss-Prot (Human)
Match: S23A2 (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 521.931 bits (1343), Expect = 3.599e-179
Identity = 281/584 (48.12%), Postives = 382/584 (65.41%), Query Frame = 0

Query:   40 MGQKVESEKSGAKQSKDELLYRIDKDPSWPLAMLLGFQHYLTMFGATVGLPFALAGALCLGNNSTIVGELISTLFFCSGLVTLLQSTFGVRLPIVQGGTYTFLAPTFAIMGARTTSCFTTVIVNATTNATASIPDPEE-WKSRITEIQGAIMVSSLFQIVIGFSGIMGFVLRYIGPLTICPTIALVGLPLFGVAGNFAGTSWGVTFVTMFCITLFSQVLKEVRLPNPF--------GDPIPVFKLFPVLLAIIVSWALSAILTAAGIAESDK------ARTDYRIDVLRESDWFRVPYPGQWGTPTVNVAAVFGMLAGVLASMLESIGDYYACAKLSGAPPPPKHALNRGLGFEGLGCLITGAWGTGNGTTSYSENISAIGITRVGSLRVIRCGAMIMIVLSIIGKFGALFATVPDPVIGGIFIIMFGMITAVGLSSLQYVDLSSMRNLFVLGTSLFFGMVIPAWIGENGKSIDTGSSAVDQIIKVLLSTNMFVGGVTGFFLDNLLPGTKEERGIIKWKRSFDGDGNSTGTTASIHVYDPPF-IGSLFKHRVCKYIPFLPYYG-------NKSDVTMDNIEDAK 600
            + + ++S  S   Q  D ++Y I+  P W L + LG QHYLT F  T+ +PF LA A+C+G +     +LI T+FFC G+ TLLQ+TFG RLP+ Q   + FLAP  AI+      C TT +  +  N TA +   E  W  RI EIQGAI++SSL ++VIG  G+ G +L+YIGPLTI PT+AL+GL  F  AG  AG  WG+  +T+F + LFSQ  + V+ P P            + +FK+FP++LAI+VSW L  I T   +   D       ARTD R  VL  + WF+VPYP QWG PTV+ A V GML+ V+AS++ESIGDYYACA+LS APPPP HA+NRG+  EGL C++ G +GTGNG+TS S NI  +GIT+VGS RVI+CGA +M+ L +IGKF ALFA++PDPV+G +F  +FGMITAVGLS+LQ++DL+S RNLFVLG S+FFG+V+P+++ +N   + TG + +DQ++ VLL+T MFVGG   F LDN +PGT EERGI KWK+   G G    +   +  Y+ PF +  + K+R   Y+P  P +         KSD +  + ED++
Sbjct:   72 LAETLDSTGSLDPQRSD-MIYTIEDVPPWYLCIFLGLQHYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTTFGCRLPLFQASAFAFLAPARAILSLDKWKCNTTDV--SVANGTAELLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQAAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQN--PLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTIPGTPEERGIRKWKK---GVGKGNKSLDGMESYNLPFGMNIIKKYRCFSYLPISPTFVGYTWKGLRKSDNSRSSDEDSQ 647

The following BLAST results are available for this feature:

BLAST of TCONS_00003797-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S23A2	3.599e-179	48.12	Solute carrier family 23 member 2 OS=Homo sapiens ...	[more]

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TCONS_00003797-protein (polypeptide) - C. hemisphaerica