TCONS_00003804-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003804-protein
Unique NameTCONS_00003804-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003804-protein ID=TCONS_00003804-protein|Name=TCONS_00003804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
YGLLKKMVQSNNPIFIILCFFFTILYITHAENVKVIHPVDQNIVTFPSES
TPDFKDKISQVKTIVKLEDNSIVIGAVNMLAKFSSDLKLIKSVKLEPSDE
DISKCGDVLEKCQNNILSLVIGENEHVHACGTYAKQPGCWTFDQDLKEVS
VKKYRFLPTLSNTNLTVMYTG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002119XLOC_002119Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003804TCONS_00003804Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001627Semap_dom
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001627Sema domainPFAMPF01403Semacoord: 68..159
e-value: 9.9E-12
score: 44.3
IPR001627Sema domainPROSITEPS51004SEMAcoord: 34..171
score: 10.428
IPR001627Sema domainSUPERFAMILY101912Sema domaincoord: 63..150
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 34..167
e-value: 9.3E-14
score: 50.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003804-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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