TCONS_00003813-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003813-protein
Unique NameTCONS_00003813-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length321

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003813-protein ID=TCONS_00003813-protein|Name=TCONS_00003813-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MASRLVVTDPFAKSKKTIDEIDLASSLTNFKKSVYVEFGVKVEEQELLYL
GQILEDDEKSLQSYGVQNETTIYLFKKLPEEEPKITEMRPTPSIDEISSL
LAKAKNPAFKTMLKKFFQKKENIEKILNENEKLKNDDIVAALLRDSDLSA
PVLESLTPERIVNEFPNLALALKLVLSKLSATDSIGRRDLLQDGEDYEGI
DPAYLAQAELMASNEAAIQQNQQQQQSSASSQQNAQQISAADLANALSFA
TMTQDPATPSSLPFGSPGSQPNRQPQPDFTAGIEQMRTEFNISEDVARRA
LVMTNGNVQMAVNLVFDGSVN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002125XLOC_002125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003813TCONS_00003813Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..136
NoneNo IPR availablePFAMPF14555UBA_4coord: 291..318
e-value: 2.6E-5
score: 23.8
NoneNo IPR availableGENE3D1.10.8.10coord: 265..320
e-value: 3.6E-5
score: 23.5
NoneNo IPR availableGENE3D3.10.20.90coord: 6..243
e-value: 3.0E-14
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..279
NoneNo IPR availableCDDcd01769UBLcoord: 13..74
e-value: 5.67343E-8
score: 48.0322
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 7..77
e-value: 3.4E-5
score: 33.3
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 13..77
e-value: 4.4E-11
score: 42.2
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 20..81
score: 13.446
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 12..83
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 277..318

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003813-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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