Mitochondrial carrier protein (polypeptide) - C. hemisphaerica

Overview
NameMitochondrial carrier protein
Unique NameTCONS_00003880-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003880-protein ID=TCONS_00003880-protein|Name=Mitochondrial carrier protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MESFIAGSASGAISCFLFQPLDLIKTKLQAQVSTATSLQQAIVDGRLAPK
HNYSQSSVASLLTQVVREDKVLGLWKGLTPSLYRTVPGVGMYFCTLHTMK
SVLDEEPTFYQNLMLGFTARACVGTAVLPMTVVKARYESGKYKYKTVSDG
LRTIWRAEGLRGLFSGCTATILRDAPYSGIYLMFYSQGKKTMKDFASIDE
KDTKVHFICGINAGLMASLVTHPFDVIKTQMQLYPEKYRGTQHCIKVIFS
QYGFAGFMRGLTPRCVRRTLISALSWTVFEEIMKRLKLRI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002178XLOC_002178Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003880TCONS_00003880Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR030847SLC25A38
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 3..16
score: 35.71
coord: 16..30
score: 26.45
coord: 164..182
score: 21.31
coord: 210..232
score: 26.44
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 1..286
e-value: 7.7E-74
score: 247.6
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 2..281
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 205..286
e-value: 2.2E-18
score: 65.9
coord: 2..103
e-value: 2.6E-19
score: 68.8
coord: 107..193
e-value: 7.2E-19
score: 67.4
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 201..285
score: 21.934
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 107..191
score: 20.689
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..102
score: 19.467
IPR030847Solute carrier family 25 member 38HAMAPMF_03064SLC25A38coord: 1..287
score: 35.514

Blast
[Close]
BLAST of Mitochondrial carrier protein vs. Swiss-Prot (Human)
Match: S2538 (Solute carrier family 25 member 38 OS=Homo sapiens GN=SLC25A38 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.033e-89
Identity = 137/295 (46.44%), Postives = 197/295 (66.78%), Query Frame = 0 
Query:    1 MESFIAGSASGAISCFLFQPLDLIKTKLQAQVSTATSLQQAIVDGRLAPKHNYSQSSVASLLTQVVREDKVLGLWKGLTPSLYRTVPGVGMYFCTLHTMKSVL--DEEPTFYQNLMLGFTARACVGTAVLPMTVVKARYESGKYKYKTVSDGLRTIWRAEGLRGLFSGCTATILRDAPYSGIYLMFYSQGKKTMKDFASIDEKDTKV----HFICGINAGLMASLVTHPFDVIKTQMQLYPEKYRGTQHCIKVIFSQYGFAGFMRGLTPRCVRRTLISALSWTVFEEIMKRLKLR 289
            +++F+ GS SG  S  LFQPLDL+KT+LQ       +LQ +         H   +  + ++L +VVR + +LGLWKG++PS+ R VPGVG+YF TL+++K        PT  +++MLG  +R+  G  + P+TV+K RYESGKY Y+++   LR+I+ +EG RGLFSG TAT+LRDAP+SGIYLMFY+Q K  +      D+ D  +    +F CGI AG++ASLVT P DVIKT MQLYP K++     + +IF  YG  GF +G  PR +RRTL++A++WTV+EE+M ++ L+
Sbjct:   28 IKAFLCGSISGTCSTLLFQPLDLLKTRLQ-------TLQPS--------DHGSRRVGMLAVLLKVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHPPTALESVMLGVGSRSVAGVCMSPITVIKTRYESGKYGYESIYAALRSIYHSEGHRGLFSGLTATLLRDAPFSGIYLMFYNQTKNIVPH----DQVDATLIPITNFSCGIFAGILASLVTQPADVIKTHMQLYPLKFQWIGQAVTLIFKDYGLRGFFQGGIPRALRRTLMAAMAWTVYEEMMAKMGLK 303
The following BLAST results are available for this feature:
BLAST of Mitochondrial carrier protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25381.033e-8946.44Solute carrier family 25 member 38 OS=Homo sapiens... [more]
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