TCONS_00003896-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003896-protein
Unique NameTCONS_00003896-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003896-protein ID=TCONS_00003896-protein|Name=TCONS_00003896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MSNKPKKQRWYLGGPAGAGAVLFTHPLDLLKVHLQTQAKPSKGLISAGVD
VIKNDGILGLYSGISASILRQLTYTTVRFGMYEKISSSILEGRSEALPFY
QKLAIGCLSGFIGGVAGNPADMVNVRMQNDMRLPKEMRRNYSHAFNGLYR
VAVEDGFRTLFAGVSMTATRGLLITIGQVAVYDQTKQMLIGTGYFKDNVV
THLTSSVFAGTVATIMTQPFDVMKTRLMNAKPGEYNGIFDCARVLAKDGI
FQGFYRGFVPAWIRLGPHTILTWLILEQLRRAFPYKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002184XLOC_002184Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003896TCONS_00003896Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 19..37
score: 26.57
coord: 106..128
score: 30.72
coord: 61..79
score: 27.26
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 3..283
e-value: 5.7E-68
score: 228.3
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 6..279
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 198..284
e-value: 6.0E-18
score: 64.5
coord: 97..190
e-value: 6.4E-15
score: 54.8
coord: 10..89
e-value: 1.7E-18
score: 66.2
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 8..88
score: 20.925
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 197..282
score: 23.822
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 97..188
score: 18.973

Blast
[Close]
BLAST of TCONS_00003896-protein vs. Swiss-Prot (Human)
Match: DIC (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 3.678e-112
Identity = 151/286 (52.80%), Postives = 201/286 (70.28%), Query Frame = 0 
Query:    1 MSNKPKKQRWYLGGPAGAGAVLFTHPLDLLKVHLQTQAKPSKGLISAGVDVIKNDGILGLYSGISASILRQLTYTTVRFGMYEKISSSILEGRSEALPFYQKLAIGCLSGFIGGVAGNPADMVNVRMQNDMRLPKEMRRNYSHAFNGLYRVAVEDGFRTLFAGVSMTATRGLLITIGQVAVYDQTKQMLIGTGYFKDNVVTHLTSSVFAGTVATIMTQPFDVMKTRLMNAKPGEYNGIFDCARVLAKDGIFQGFYRGFVPAWIRLGPHTILTWLILEQLRRAFPYK 286
            M+ + +  RWY GG A  GA   THPLDLLKVHLQTQ +    +    + V++ DGIL LYSG+SAS+ RQ+TY+  RF +YE +   + +G    LPF++K+ +G +SG  GG  G PAD+VNVRMQND++LP+  RRNY+HA +GLYRVA E+G R LF+G +M ++RG L+T+GQ++ YDQ KQ+++ TGY  DN+ TH  +S  AG  AT + QP DV+KTRLMN+K GEY G+F CA   AK G    FY+G VPA IRL PHT+LT++ LEQLR+ F  K
Sbjct:    1 MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPL-AFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIK 284
The following BLAST results are available for this feature:
BLAST of TCONS_00003896-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIC3.678e-11252.80Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
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