TCONS_00003897-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003897-protein
Unique NameTCONS_00003897-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003897-protein ID=TCONS_00003897-protein|Name=TCONS_00003897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MFVFIIPFIVIRILYSLYRKFILTAVPVKDKIVLVTGASSGLGEACAKKF
AEEGAKVILCARNVVELKRVKKEISGDENSKWPVVYSMDITQKKDIDNCI
QEIESNHCFVDILISNAGVSLRGTVIDTDIEVHRKMMEVNYFGPVNLVKA
VLPSMLSRRTGHIVSIGSLQAVVAIPYRCAYASSKHASQAFFDSLRAEVC
GEGINISTINPGYIRTNLSKNAFTPDGEKHGVMDKTTASGMPPEYVAECV
YDCVYKPRNDLLLCGFFNGLGPMTRHCCPPLYHWYMARKGRKEAEMYKKK
T
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002185XLOC_002185Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003897TCONS_00003897Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 32..49
score: 44.53
coord: 108..119
score: 45.01
coord: 155..171
score: 28.61
coord: 202..219
score: 29.95
coord: 181..200
score: 27.41
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 181..200
score: 30.62
coord: 108..119
score: 45.04
coord: 161..169
score: 44.98
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 31..223
e-value: 2.2E-52
score: 177.3
NoneNo IPR availablePIRSFPIRSF00012611-beta-HSD1coord: 1..298
e-value: 1.9E-51
score: 172.1
NoneNo IPR availableGENE3D3.40.50.720coord: 209..267
e-value: 0.18
score: 10.7
NoneNo IPR availableGENE3D3.40.50.720coord: 9..208
e-value: 1.4E-53
score: 181.0
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 168..196
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 27..291

Blast
[Close]
BLAST of TCONS_00003897-protein vs. Swiss-Prot (Human)
Match: DRS7B (Dehydrogenase/reductase SDR family member 7B OS=Homo sapiens GN=DHRS7B PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 6.964e-83
Identity = 127/286 (44.41%), Postives = 184/286 (64.34%), Query Frame = 0 
Query:   14 LYSLYR--KFILTAVPVKDKIVLVTGASSGLGEACAKKFAEEGAKVILCARNVVELKRVKKEISGDENSKW----PVVYSMDITQKKDIDNCIQEIESNHCFVDILISNAGVSLRGTVIDTDIEVHRKMMEVNYFGPVNLVKAVLPSMLSRRTGHIVSIGSLQAVVAIPYRCAYASSKHASQAFFDSLRAEVCGEGINISTINPGYIRTNLSKNAFTPDGEKHGVMDKTTASGMPPEYVAECVYDCVYKPRNDLLLCGFFNGLGPMTRHCCPPLYHWYMARKGRKE 293
            ++ L+R  +++     +++ +V++TGA+SGLG+ CAK F   GAK++LC RN   L+ + +E++    +K     P + + D+T    I     EI     +VDIL++NAG+S RGT++DT ++V +++ME NYFGPV L KA+LPSM+ RR GHIV+I S+Q  ++IP+R AYA+SKHA+QAFFD LRAE+    I ++ I+PGYI TNLS NA T DG ++GVMD TTA G  P  VA+ V   V K + D++L      L    R   P L+   MA + RKE
Sbjct:   34 VFGLFRLLQWVRGKAYLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNGGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQGRSPVEVAQDVLAAVGKKKKDVILADLLPSLAVYLRTLAPGLFFSLMASRARKE 319
The following BLAST results are available for this feature:
BLAST of TCONS_00003897-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DRS7B6.964e-8344.41Dehydrogenase/reductase SDR family member 7B OS=Ho... [more]
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