TCONS_00003921-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003921-protein
Unique NameTCONS_00003921-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length357

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003921-protein ID=TCONS_00003921-protein|Name=TCONS_00003921-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
SLFLGWLLITVYILALLFLYHKTSKAFFQKVESEESKPDSSELLESLLQQ
INLQKTYIDQVTESMANLHQNNNNITKVENCTCQKPNLEEYAEKSTMENL
QKQILSTIDVVKKMNERVNKVQVDVEFQQEAYKELESKENGSKDLCNGGD
CLSSSPNLFETIHSALDHFHADVLALPDFAMESAGGSINIPHHSETCEVG
APIIKVFGLPLWQDPRSPRNVIQPDTTPGNCWPMQGTNGYIVIKLAVSTQ
ITMVTLEHLDRKLDRYSTSQYQLAPREFDVYAWLDKEGKEKFHLGSYVYL
REKSAIQTFNVQNYYSKAISYVELRVKSNYGNPDCTCLYRFRVHGLSTEW
DNLDQET
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002196XLOC_002196Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003921TCONS_00003921Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012919SUN_dom
IPR008979Galactose-bd-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..138
IPR012919SUN domainPFAMPF07738Sad1_UNCcoord: 214..345
e-value: 4.1E-35
score: 120.6
IPR012919SUN domainPROSITEPS51469SUNcoord: 185..348
score: 33.216
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 94..350
e-value: 8.9E-8
score: 31.8

Blast
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BLAST of TCONS_00003921-protein vs. Swiss-Prot (Human)
Match: SUN2 (SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 2.377e-41
Identity = 72/184 (39.13%), Postives = 109/184 (59.24%), Query Frame = 0 
Query:  162 IHSALDHFHADVLALPDFAMESAGGSINIPHHSETCEVGAPIIKVFGLPLWQDPRSPRNVIQPDTTPGNCWPMQGTNGYIVIKLAVSTQITMVTLEHLDRKLDRYSTSQYQLAPREFDVYAWLDKEGKEKFHLGSYVYLREKSAIQTFNVQNYYSKAISYVELRVKSNYGNPDCTCLYRFRVHG 345
            +  AL  +  D + L D+A+ES G S+     SET E    ++ +FG+PLW   +SPR ++QPD  PGNCW  QG  G+ V++L+   + T VTLEH+ + L   ST     AP++F ++ + +   +E   LG + Y ++   IQTF+ Q         VELR+ +N+G+P+ TC+YRFRVHG
Sbjct:  532 VKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNST--ISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHG 713
The following BLAST results are available for this feature:
BLAST of TCONS_00003921-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUN22.377e-4139.13SUN domain-containing protein 2 OS=Homo sapiens GN... [more]
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