TCONS_00003934-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003934-protein
Unique NameTCONS_00003934-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003934-protein ID=TCONS_00003934-protein|Name=TCONS_00003934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
MEGLREQVMINQFIMAAGCAREQAKQILQASQWQFEAALSIYFQEVPVAH
PSHSAVAAPTNTPATPPNFPDALLAFSKLKTSNETSPNNNNNQSKTQSGT
QVPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002199XLOC_002199Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003934TCONS_00003934Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14555UBA_4coord: 9..45
e-value: 2.7E-9
score: 36.6
NoneNo IPR availableGENE3D1.10.8.10coord: 1..54
e-value: 2.8E-18
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..104
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0
NoneNo IPR availableCDDcd14343UBA_F100B_likecoord: 6..44
e-value: 9.99004E-18
score: 70.2006
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 6..44

Blast
[Close]
BLAST of TCONS_00003934-protein vs. Swiss-Prot (Human)
Match: UBAD2 (UBA-like domain-containing protein 2 OS=Homo sapiens GN=UBALD2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.098e-34
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 0 
Query:    1 MEGLREQVMINQFIMAAGCAREQAKQILQASQWQFEAALSIYFQE--VPVAHPSHSAVAAPTNTPATPPNFPDALLAFSKLKTS 82
            M+ LR QVMINQF++AAGCA +QAKQ+LQA+ WQFE ALS +FQE  +P +H  H  +  P+NTPATPPNFPDAL  FSKL+ S
Sbjct:    5 MDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNIPNSHHHHQMMCTPSNTPATPPNFPDALAMFSKLRAS 88
The following BLAST results are available for this feature:
BLAST of TCONS_00003934-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBAD22.098e-3464.29UBA-like domain-containing protein 2 OS=Homo sapie... [more]
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