TCONS_00003946-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003946-protein
Unique Name	TCONS_00003946-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	442

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003946-protein ID=TCONS_00003946-protein|Name=TCONS_00003946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MYFFDCLLQAHTFPFSSFRLNHTRKLLKLTMNDSHIGKLFFQTAGAHVLS
GFFAWAAILITGHQIALHTRHYTNPDQQKYIVRVLLIVPFYALDSWLSML
FFEKNYYIYFDTIRDCYEAFVIYNFLCLCYEYLGGEMAILSEIRGKVLKT
SYFTCTCCFSGRQINIAFLRACKKATLQFCFTKPIMAAITLVLVATRNYS
DGDFRPDKGYLYITIIYNISYTIALYGLFLFYNATKDLLTPYYPVLKFLT
VKFIVFMSFWQGFVLAIIEKCGMITTYHEIEAGTISAGYQNFILCIEMFF
AAVMLRFAFPYQVYRVQNHRLIDRDSLKEISSNLRRSINPKDILQDTIHN
FAPAYQQYAGVNKAKDVQVTIADDGRETVSYQVTIPHSARDDYDSDSASG
GERVSIGNKGVFKQQNDRFRTIDGHSPSLLLDTDDDKVNLLG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002207	XLOC_002207	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003946	TCONS_00003946	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005178	Ostalpha/TMEM184C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005178	Organic solute transporter subunit alpha/Transmembrane protein 184	PFAM	PF03619	Solute_trans_a	coord: 48..314 e-value: 2.7E-92 score: 309.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 390..410

Blast

[Close]

BLAST of TCONS_00003946-protein vs. Swiss-Prot (Human)
Match: T184B (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 7.833e-138
Identity = 192/327 (58.72%), Postives = 242/327 (74.01%), Query Frame = 0

Query:   38 KLFFQTAGAHVLSGFFAWAAILITGHQIALHTRHYTNPDQQKYIVRVLLIVPFYALDSWLSMLFFEKN-YYIYFDTIRDCYEAFVIYNFLCLCYEYLGGEMAILSEIRGKVLKTSYFTCTCCFSGRQINIAFLRACKKATLQFCFTKPIMAAITLVLVATRNYSDGDFRPDKGYLYITIIYNISYTIALYGLFLFYNATKDLLTPYYPVLKFLTVKFIVFMSFWQGFVLAIIEKCGMITTYH----EIEAGTISAGYQNFILCIEMFFAAVMLRFAFPYQVYRVQNHRLIDR-DSLKEISSNLRRSINPKDILQDTIHNFAPAYQQY 358
             +F  T  A  +SGFF W A+LIT HQI +H R Y+ P++Q+YIVR+L IVP YA DSWLS+LFF  + YY+YF T+RDCYEA VIYNFL LCYEYLGGE +I+SEIRGK +++S    TCC  G+  +I FLR CK+ATLQFC  KP+MA  T+VL A   Y DGDF    GYLY+TIIYNIS ++ALY LFLFY AT++LL+PY PVLKF  VK ++F+SFWQG +LAI+EKCG I   H     +  GT++AGYQ+FI+C+EMFFAA+ LR AF Y+VY  +      R   +K ISS+L+ ++NP DI+QD IHNF+PAYQQY
Sbjct:   38 PVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIVQDAIHNFSPAYQQY 364

The following BLAST results are available for this feature:

BLAST of TCONS_00003946-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
T184B	7.833e-138	58.72	Transmembrane protein 184B OS=Homo sapiens GN=TMEM...	[more]

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TCONS_00003946-protein (polypeptide) - C. hemisphaerica