TCONS_00004022-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004022-protein
Unique Name	TCONS_00004022-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	429

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004022-protein ID=TCONS_00004022-protein|Name=TCONS_00004022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
MVLEEIFPKPTRTNYWSEHEKWKWTINLCIGSVLLFSTRNSMAVCVPAIS
KELGWDKEISGTALSSFFVGYIGSNLVGGSFADRFGGAKTILYSSLVWSS
LTIVLPIFANSQGIFTSSNYDIFAIRFLTGCSQGFYYTSFAALISRYVRT
DDKGLIAGIVYSGCAVGIILTGFFGSLLIEAGHWSYVFTISGFSSLLWLI
WFQNLSRETIQKETIENFNSGNEAVDTRKFIKSILCERSILALLIAYFGS
GCTYGVLNSWTPVYFHDMFPNSKGWIFNVIPWLTSFIFELVTGYFANNLL
KNGKSVLFVRKTYAAFLFLGTAFFSILLTKVKIFEQALLLMSLVAGFSAF
GSSSISMNPQDVCPNKAGSLFGLSNAIASFGGTIGVYLTGLVLETNNNWS
LIFICNAIISILSFLVFQLFGSTKPIDNL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002260	XLOC_002260	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004022	TCONS_00004022	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 28..385 e-value: 9.6E-39 score: 133.2
None	No IPR available	GENE3D	1.20.1250.20		coord: 17..220 e-value: 8.0E-28 score: 96.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 228..425 e-value: 1.1E-22 score: 79.9
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 24..425 score: 24.755
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 28..420 e-value: 1.90922E-26 score: 106.629
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 12..420

Blast

[Close]

BLAST of TCONS_00004022-protein vs. Swiss-Prot (Human)
Match: S17A9 (Solute carrier family 17 member 9 OS=Homo sapiens GN=SLC17A9 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 2.492e-72
Identity = 144/425 (33.88%), Postives = 228/425 (53.65%), Query Frame = 0

Query:   16 WSEHEKWKWTINLCIGSVLLFSTRNSMAVCVPAISKELGWDKEISGTALSSFFVGYIGSNLVGGSFADRFGGAKTILYSSLVWSSLTIVLPIFANSQGIFTSSNYDIFAI--RFLTGCSQGFYYTSFAALISRYVRTDDKGLIAGIVYSGCAVGIILTGFFGSLLIEAGHWSYVFTISGFSSLLWLIWFQN---LSRETI--------QKETIENFNSGNEAVDTRKFIKSILCERSILALLIAYFGSGCTYGVLNSWTPVYFHDMFPNSKGWIFNVIPWLTSFIFELVTGYFANNLLKNGKSVLFVRKTYAAFLFLGTAFFSILLTKVKIFEQALLLMSLVAGFSAFGSSSISMNPQDVCPNKAGSLFGLSNAIASFGGTIGVYLTGLVLETNNNWSLIFICNAIISILSFLVFQLFGSTKPID 427
            WS  E   WT  L +G+ LL+  R+SM +C  ++S++ GW+K+ +G  LSSFF GY  + +VGG   DR GG K IL S+  W S+T V P+ A+      SS +  F    R L G  QG Y+ +  +L+S+ VR  ++     IV +G   G +LTG  GSLL+E   W  +F  SG  +LLW +W+     LS + +        Q   +   N     V  R+  +    + ++ A +++   + C++ +L SW P +F + FP++KGWIFNV+PWL +    L +G+ +++L+  G   + VRK         ++ F++ L     F ++++  S   G   F  S IS+N QD+ P+ AG LFG++N   +  G +GV L G ++ET  +W+ +F   AIIS L    F +FG  + +D
Sbjct:   18 WSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLLAH-----LSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAGSQFGTLLTGAVGSLLLEWYGWQSIFYFSGGLTLLW-VWYVYRYLLSEKDLILALGVLAQSRPVSRHNR----VPWRRLFR----KPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRVD 428

The following BLAST results are available for this feature:

BLAST of TCONS_00004022-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S17A9	2.492e-72	33.88	Solute carrier family 17 member 9 OS=Homo sapiens ...	[more]

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TCONS_00004022-protein (polypeptide) - C. hemisphaerica