TCONS_00004031-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004031-protein
Unique NameTCONS_00004031-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1263

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004031-protein ID=TCONS_00004031-protein|Name=TCONS_00004031-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1263bp
MLLNTVLKWFFCGLLCTLPVLSVDIRVDQQKGLDTEICFEDESQPCKTLD
YVCTGIISNHNISTANIFIQGEYILYETLLLDQYSVNLTSIQFIGNSTTI
RTNNSDIGIMIGHKSTYETETISYNITFSKLTFTAFGENTTSVILSWGAK
YLVIQSCHFGKNRCAALNVVDTNISIEDSVFEDNSGSAVNKGEVYGKHST
FPYGGNSAGGAVAILFTKRETMGIATISKSIFRNNIAVSLSQKVIIDSAE
TSVIFSHTGGALLLAFMGQSSYAKVLIQQNLFMNNLASLGGGMTLTFHDT
SGQNHVNLVENVFHQNRGSVCGGGFAIATWRQSNANQVIFKNTNFTYNAA
QVGAGGRILLQSYASIYSKDPSWQNIQFQNTRFFRNKAASASALHINYNL
GTARPFTPIIFDNVTFANHSTEVYKFSLQGPSAFSGVLLSNRVDLEFRGD
SYFYYNEVESPTFLSNCEFYVKNKVVFYKNRVQTSGGALTMTDVSHLYLY
PDSVLQFIENYAPVEGGALYVQTVGFPDMVYKYNPSCFIQYFVKEGDPIP
PSQWKVTVDFIGNGAGLKGAAIFANTITPCVWDEEFPYYSFQKALHWKGF
NFTANYISGRMKMNNSYSEFINQHVEIATDTINFKLTSDSRNQTVTAFPG
QKIPFDIEATDELSNKVYSVPVASLQENKEMNLLQKYFIFNPNDAVDAKF
ALTYSLENEAYEQLVNEDKQIIRDITFVDSSSQFISNATIKVKVLRCKPG
FYFKDDRCVCDNGPGSHVVRCEDDVVYIEKGYWGYHDSNDQLKVLQCPTN
FCSCNQTDSTMLGCAFNTTSQCKPGRTGVLCGECKSGMGLDLMTYECVKC
NGFSLALIVIIVVTIVTLGVVILILVINPKFSTLLRSILFFVQMLPYVLD
GRLSFNKIVLTVTGWLDVGGVNSVPVKSCFIEQFNSMYAVALGYLYPALI
FMVLIIVYVLHKCYLVHLKRSSPFQAFWILIVLMYKFLVETSLLLLFCVP
INDSDGGRRIFYLDGSVRCFQGSHLTMTFIAAVVLLMAVFPPPILVALIV
NGYLNFGPSIVDALTQGLGRHVRWWWSIDFLRRIAFIAIYVFATDTQLKQ
TLLTICCVIALSFHIQQQPYRNKLANHGETFLLLCLTIIVVIEPLGNEVD
SISQSQSMVSAIIISMAAGYCVLITLYVWIAYFIKRFRTRGYTQIDDLDK
DSGDEGNYRENLRRRISGGKRRYDPLTWLSSPTEKLKKSQSDRIVGGRCP
SPFHTRSYLHDKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002265XLOC_002265Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004031TCONS_00004031Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 47..647
e-value: 5.9E-12
score: 44.8
NoneNo IPR availableCDDcd00055EGF_Lamcoord: 802..848
e-value: 0.0034742
score: 36.1782
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 256..453
coord: 67..192

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004031-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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