TCONS_00004045-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004045-protein
Unique NameTCONS_00004045-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1846

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004045-protein ID=TCONS_00004045-protein|Name=TCONS_00004045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1846bp
IKQWKDLGKKFYGKSKTQEALQIYSQAKRGCNNQQSQLKRELSSNISLMH
LTLNNYGDAVNEAKSCIRLDSSWFKGYYRLAQAQCKMKRYDESSRNLILA
LDKSSDKPTDQSVLLFKNRAKINSNDYPSRINQRLLQMTLEKLHEESTEE
AWSAIDNMFTTKPKKYALSTKSTPLVKAIQRKISIPLLETLIKCGANVNE
IKTYKANDNYLQYWPLKMSIEMELHHHSACLIFYGALPNPTTEQTAKNNR
TIPPIIVATQHVICKNGSFEMLEKLIKFYKVDVHLQDQDGNTAIHIACQD
PCTQAKLYVVKTLLQNGFNPHTLNKHGLKASANDQMRGPLLNQACQLYKH
SKQSSFGRREPSASSHQSQNAAKITEITGRPANETKIEENTQENEFELLM
SETDDGLKAFKEKDWKTASTELSRKLKKMRKKEGQEQRYCEYFVLAALSS
IYLKTDKGVQVFNWLEKSLKANKEATHKILLYFCGSEKDKILVNYIMECC
IKTYSEPKLESAIKGVEVAQALVTGKKYQPQLSTMECTISIYLVIKEQIE
KLESKQIEKLESKQIEKLESKLTMSTGSFNKELGAAWYYLAKRKFQKKEC
DQMAFILASRIGKITLDIEVESLSNLHLAIHDFAFNNGRNKARTYFEQAT
VKMKDSPKVLCNEWLAIIEEINNKDIPTAFFYIQNCLQIFLQRGLETPKY
VHLMKDLALCLGHEKLPPVEESELKTLMKTIQGIDVKEKELVDTFTETGE
KVRKTKTTIVLNKIALLVVPDDDVEMKGKLCDNLTTHCFNTEQFHDCIIY
AKQAIEIKPDSLECYIKWAEALYKIKQTEDGHSVLLKALENCQQKEDKVK
ICIHIFDLNSRSDQCDTIHLTIEVDLFEEVVNKLLSDDDSKSWKILDNIA
NYSPMFEDLNKSIEIPLERVLSMDSKSFELKEEFVLKLCKRLHWKKLESS
IPTLTKKGFLDTIAQIFIKRGKDRNVLEAPILTATRFVIKTGKLMLLNKV
IEQLGQNELLGTAKTAVQECCAGGFTDKKLDALNILFIQTQGLENLKFSH
DLRKHLSKNDGRYALFIQFKHGVIDEGDQQNVQSKPDDGENTGPDVIRLD
SHLNVDKELGEFISALDVHLRKMSQEQRKRSLARASSLEEAKMRKQIMEE
VAIVDRHEVEIVESEMVSVEEDLEDKTFQEEDFEEEDNDDEDNDDDEEFD
LEKISLGDTWEVECTQEVYRVLRNKKVPLKMKKKILKKIRQLATGYWPRE
LHKRLEGVKNGILLYEAKINKASRIIWEVSVSFSERRSMSMEQEFCSILD
HDESGAIYEDKIRIWNIALQHDDVPKMIEKIQHSHDRGEHCILRKNLEVF
RQKQSLTEYDNQKHPNVYMSENVRDLVNKAVANQSQLALERKNFLFVPAA
SPNRNEFNILKFYSFTSQVASRILNVSNANYDFPFQVSPLEYAVIRLEPK
HRCCILLLGRSGTGKTTCCLYRLWSQFLHYWRTASLSGPQLPKFKTLVSV
EEQDEVNREETGVELTEHVGDVLHDEKPSTTYRSPANASNQMCCHDEIKD
EKPPEEATEGEDELEDEMVEDCEHLRQVLVTKNEVLCNEIRKNFKELSIG
SPVTTYEEIEQIESMKIEDIKPENYPLFVTAKDLLMLIDNSLPGEPFFER
DEDGNVKHEIPGWGKNKIHLSFLPNIEDDDSEDEDEEQRDENNPQDGSLA
TDLNKKKKAASKVVKKHEVTYEVFANEIWPKLIKKRNKEEKSCHPSLVWM
EIKSFIKGSAEAFMSKDKEGCLTGYLTKEEYENIGRKRAPNFEGNRDDIY
DIFLRYMKFKRYSPYFDEMDLHFNLYKRLKETLVPEWAFHQXCTNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002270XLOC_002270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004045TCONS_00004045Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR002110Ankyrin_rpt
IPR011990TPR-like_helical_dom
IPR020683Ankyrin_rpt-contain_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 40..73
e-value: 400.0
score: 0.9
coord: 1..34
e-value: 120.0
score: 5.4
coord: 74..107
e-value: 11.0
score: 14.8
coord: 778..811
e-value: 51.0
score: 8.7
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 170..200
e-value: 15.0
score: 14.5
coord: 250..285
e-value: 3300.0
score: 1.2
coord: 289..322
e-value: 0.052
score: 22.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 289..325
score: 9.805
NoneNo IPR availableGENE3D3.40.50.300coord: 1342..1641
e-value: 6.0E-4
score: 18.5
NoneNo IPR availableGENE3D3.30.2310.20coord: 1209..1304
e-value: 0.0041
score: 17.4
NoneNo IPR availableCDDcd00204ANKcoord: 215..328
e-value: 3.46857E-11
score: 62.0158
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 377..1195
e-value: 3.1E-15
score: 55.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1..147
e-value: 9.8E-13
score: 47.5
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 770..841
coord: 636..661
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 2..105
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 148..349
e-value: 4.6E-15
score: 55.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 261..325
score: 11.453
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 172..330
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..107
score: 8.722

Blast
[Close]
BLAST of TCONS_00004045-protein vs. Swiss-Prot (Human)
Match: TRNK1 (TPR and ankyrin repeat-containing protein 1 OS=Homo sapiens GN=TRANK1 PE=2 SV=4)

HSP 1 Score: 382.874 bits (982), Expect = 2.466e-107
Identity = 241/670 (35.97%), Postives = 369/670 (55.07%), Query Frame = 0 
Query: 1185 EEDNDDEDNDDDEEFDLEKI--SLGD----TWEVECTQEVYRVLRNKKVPLKMKKKILKKIRQLATGYWPRELHKRLEGVKNGILLYEAKINKASRIIWEVSVSFSERRS------MSMEQEFCSILDHDESGAIYEDKIRIWNIALQHDDVPKMIEKIQHSHDRGEHCILRKNLEVFRQKQSLTEYDNQKH-PNVYMSENVRDLVNKAVANQSQLALERKNFLFVPAASPNRNEFNILKFYSFTSQVASRILNVSNANYDFPFQVSPLEYAVIRLEPKHRCCILLLGRSGTGKTTCCLYRLWSQFLHYWRTASLSGPQLPKFKTLVSVEEQDEVNREETGVELTEHVGDVLHDEKPSTTYRSPANASNQMCCHDEIKDEKPPEEATEGEDELEDEMVEDCEHLRQVLVTKNEVLCNEIRKNFKELSIGSPVTTYEEIEQIESMKIEDIKPENYPLFVTAKDLLMLIDNSLPGEPFFERDEDGNVKHEIPGWGKNKIHLSFLPNIEDDDSEDEDEEQRDENNPQDGSLATDLNKKKKAASKVVKKHEVTYEVFANEIWPKLIKKRNKEEKSCHPSLVWMEIKSFIKGSAEAFMSKDKEGCLTGYLTKEEYENIGRKRAPNFEGNRDDIYDIFLRYMKFKRYSPYFDEMDLHFNLYKRLKETLVPEWAFHQ 1841
            +++   E NDD +++  ++I   L D    TWE+ECT E+ + L +K +   +KKKI+  I+QL  G W + L KRL+ +K  I L+EAK++K +R++WE+++ FS R S      ++ EQ  C++   ++SG IY + IRIW+I L H  +   I+ I ++++RG  C+LRK L+   + Q       QK  P  Y+ +            +++   E  N  + P AS    E+NI+KF+SF++ +A  ILN + A  ++PF+V  LEYAVI L P+    I+L+GRSGTGKTTCCLYRLW +F  YW  A  +G  L   +  +    + E  +E  G E  E   D   ++          +      C      E  P    +  +    E     EHL Q+ VTKN VLC E+++NF ELS  +  T++ +       K++D++ EN+PLFVT+K LL+L+D SLP +PFF R+EDG++K  I GW   +   S +P+ ++D+ E E           DG  + +    +        +  VT+EVF NEIWPK+ K R     + +P+L+W EIKSF+KGS EA        C  G LT+E Y+ +GRKR PNF+ +R +IY +F  Y + +    YFDE D+ +N+ +RL +  V  W+ H+
Sbjct:  759 DDNRGKEGNDDQDDWSTQEIEACLQDFDNMTWEIECTSEMLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQLFEAKLDKGARMLWELAIDFSPRCSENPEKIIATEQNTCAM---EKSGRIYTEIIRIWDIVLDHCKLADSIKAICNAYNRGLSCVLRKKLKGINKGQVSANMKIQKRIPRCYVEDT-----------EAEKGREHVNPEYFPPASAVETEYNIMKFHSFSTNMAFNILNDTTATVEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPLLAKQVWLKRRLEVEPGKESPGGEEEEEEEDEEEEDSIEVETVESIDEQEYEACAGGAGVE--PAGDGQAAEVCAPEHPHQLEHLHQIFVTKNHVLCQEVQRNFIELSKSTKATSHYKPLDPNIHKLQDLRDENFPLFVTSKQLLLLLDASLP-KPFFLRNEDGSLKRTIIGWSAQE--ESTIPSWQEDEEEAE----------VDGDYSEEDKAVEMRTGDSDPRVYVTFEVFKNEIWPKMTKGRT----AYNPALIWKEIKSFLKGSFEAL------SCPHGRLTEEVYKKLGRKRCPNFKEDRSEIYSLFSLYQQIRSQKGYFDEEDVLYNISRRLSKLRVLPWSIHE 1389
The following BLAST results are available for this feature:
BLAST of TCONS_00004045-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRNK12.466e-10735.97TPR and ankyrin repeat-containing protein 1 OS=Hom... [more]
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