TCONS_00004057-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004057-protein
Unique NameTCONS_00004057-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length361

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004057-protein ID=TCONS_00004057-protein|Name=TCONS_00004057-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MKLLVVFAALIAFAGACSDKSSYCRFFPRAQCSTNAIVRMQCPKYCGTCG
GSGSGSSGSCRDLSSNCYMFHSQCSNSYVRQRCPKTCNACSGGGSGGSGG
VPSCAGKGTGLPSGAQCGQVKVSSSRVIAGENAKAGAWPWQIAMTMKDGR
FFCGGSLVNAKWVVTASHCIDKQQASNIQIVLGGHDLNHPSGSEQTRNVK
RLIMHPSYGRLNNDIALIELDRPVMFTDRIQPVCLPEPTEQPAVGSKCYL
TGWGKIQHPGSSHPILQQVGLTIQENSQCNRLNSKYVPISQQMVCAANPG
TRQMGCHGDSGGPLVCQQPDGSFKLHGAVSWGSPTCTASDAWTVFARVSV
FRNWLNCYINN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002272XLOC_002272Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004057TCONS_00004057Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR003582ShKT_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 359..361
NoneNo IPR availableGENE3D2.40.10.10coord: 127..158
e-value: 8.3E-17
score: 60.6
NoneNo IPR availableGENE3D2.40.10.10coord: 231..361
e-value: 1.2E-38
score: 131.9
NoneNo IPR availableGENE3D2.40.10.10coord: 159..230
e-value: 7.4E-31
score: 105.6
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 303..315
score: 61.25
coord: 154..169
score: 55.14
coord: 210..224
score: 41.33
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 126..355
e-value: 4.3E-79
score: 278.8
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 128..355
e-value: 4.1E-63
score: 213.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 127..360
score: 34.638
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 127..356
e-value: 2.84588E-85
score: 259.516
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 16..50
e-value: 0.0078
score: 25.4
coord: 59..91
e-value: 1.2E-5
score: 34.8
IPR003582ShKT domainPFAMPF01549ShKcoord: 59..90
e-value: 4.6E-4
score: 20.6
coord: 17..49
e-value: 3.2E-4
score: 21.1
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 17..49
score: 7.044
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 60..90
score: 9.167
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 164..169
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 116..360

Blast
[Close]
BLAST of TCONS_00004057-protein vs. Swiss-Prot (Human)
Match: CTRL (Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.719e-49
Identity = 97/239 (40.59%), Postives = 132/239 (55.23%), Query Frame = 0 
Query:  124 SSRVIAGENAKAGAWPWQIAMTMKDGRFFCGGSLVNAKWVVTASHCIDKQQASNIQIVLGGHDLNHPSGSEQTRNVKRLIMHPSYG--RLNNDIALIELDRPVMFTDRIQPVCLPEPTEQPAVGSKCYLTGWGKIQHPGSSHPI-LQQVGLTIQENSQCNRLNSKYVPISQQMVCAANPGTRQMGCHGDSGGPLVCQQPDGSFKLHGAVSWGSPTCTASDAWTVFARVSVFRNWLNCYI 359
            S R++ GENA  G+WPWQ+++    G  FCGGSL++  WVVTA+HC          +VLG +D +  +   Q  +V R I HPS+    +NND+ L++L  P  +T RI PVCL    E    G  C  TGWG++   G+  P  LQQV L +   +QC +       I+  M+CA   G     C GDSGGPLVCQ+ + ++ L G VSWG+  C    A  V+ RVS F  W+N  I
Sbjct:   31 SQRIVNGENAVLGSWPWQVSLQDSSGFHFCGGSLISQSWVVTAAHC--NVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALPLVTVNQCRQYWGS--SITDSMICAGGAGASS--CQGDSGGPLVCQKGN-TWVLIGIVSWGTKNCNV-RAPAVYTRVSKFSTWINQVI 261
The following BLAST results are available for this feature:
BLAST of TCONS_00004057-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRL5.719e-4940.59Chymotrypsin-like protease CTRL-1 OS=Homo sapiens ... [more]
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