TCONS_00004148-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004148-protein
Unique NameTCONS_00004148-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length732

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004148-protein ID=TCONS_00004148-protein|Name=TCONS_00004148-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MEPKEESEKEETVEKMLEVHLTGCSKGLGMKIIGGLDPNGNYTGIFVKQI
LPDGCIDKDGQINLGDMICEVNNYDLRHCSQADAISYLRVAAQSGEVRLL
VDNTQQAQELFLALFENRRPSQPTTKPNNLTDPSQETGNDKKSLLNIHSP
SFDSGLYGSSFNSHDVTHHDVINNDPVKTVFILHETSLGISLGGGTDKQD
GPNIFISDIVSGSDVFNEGSLRTGDVIMSINGESFVGLTNEQAKSSLSRM
KLRKDLRSFQIAYVEKEQIHLIKEQITPRRNLPSTSTPQQAISTNEAFQS
TPRKQNDSLLNELYDVMADIQESESDWNSQKMSPQELKNGEDDVFVKRKI
LFPPRFLSVPFLKNIPPQRTISHYLQQDVPSSQDEVARKKAKRPSETLSL
EAHTTIKLEKLEGALQHLGLSPNQTQRKEIRKRLQSDADGSVTYGDFVRI
AREVLHLNNGLKDRTQSLKNKSLTFQKSIMEEMDTTTTTKVDENENMISC
NDEIYRLRRERDEALRDARYYRDLLHEKDADCLQLEEDLQVTQQQVAVAR
RECNTLRYESRKEIEASQHQHEQQTEKTIERLEQENSGLRSNSLGTKDLK
DLQKRLVVVGCQLRKTEISKRSYEVAVDKLTKFVEKVHLNLDSQQDTSSS
KRTRNRSKELSSEAKETIRNVKMLLEEEPLPFGWEEVYSPEGTRYYMNHV
TQTTSWVHPISSVSRKPKSVKSRKNSASSKSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002303XLOC_002303Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004148TCONS_00004148Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 572..592
NoneNo IPR availableCOILSCoilCoilcoord: 657..677
NoneNo IPR availableCOILSCoilCoilcoord: 525..552
NoneNo IPR availableGENE3D2.20.70.10coord: 693..716
e-value: 8.0E-8
score: 31.3
NoneNo IPR availableGENE3D2.30.42.10coord: 176..247
e-value: 2.0E-12
score: 46.4
NoneNo IPR availableGENE3D2.20.70.10coord: 565..692
e-value: 1.0E-11
score: 44.0
NoneNo IPR availableGENE3D1.10.238.10coord: 248..473
e-value: 4.3E-4
score: 19.3
NoneNo IPR availableGENE3D2.30.42.10coord: 4..122
e-value: 1.3E-15
score: 56.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..664
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 708..732
NoneNo IPR availableCDDcd00201WWcoord: 683..709
e-value: 6.6825E-9
score: 51.7598
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 185..252
e-value: 6.99968E-11
score: 58.347
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 18..101
e-value: 6.3798E-12
score: 61.4286
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 186..260
e-value: 2.2E-9
score: 47.2
coord: 26..105
e-value: 7.7E-12
score: 55.3
IPR001478PDZ domainPFAMPF00595PDZcoord: 186..247
e-value: 1.6E-10
score: 41.0
coord: 25..101
e-value: 3.8E-9
score: 36.7
IPR001478PDZ domainPROSITEPS50106PDZcoord: 18..103
score: 15.099
IPR001478PDZ domainPROSITEPS50106PDZcoord: 188..247
score: 15.179
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 173..251
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 11..105
IPR001202WW domainSMARTSM00456ww_5coord: 679..711
e-value: 4.6E-9
score: 46.1
IPR001202WW domainPFAMPF00397WWcoord: 680..709
e-value: 7.5E-11
score: 41.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 684..709
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 678..711
score: 16.294
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 677..710

Blast
[Close]
BLAST of TCONS_00004148-protein vs. Swiss-Prot (Human)
Match: STXB4 (Syntaxin-binding protein 4 OS=Homo sapiens GN=STXBP4 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 9.778e-69
Identity = 171/585 (29.23%), Postives = 302/585 (51.62%), Query Frame = 0 
Query:  162 NSHDVTHHDVINNDPV-KTVFILHETSLGISLGGGTDKQDGPNIFISDIVSGSDVFNEGSLRTGDVIMSINGESFVGLTNEQAKSSLSRMKLRKDLRSFQIAYVEKEQIHLIKEQITPRRNLPSTSTPQQAISTNEAFQSTPRKQNDSLLNELYDVMADIQESESDWNSQKMSPQELKNGEDDVFVKRKILFPPRFLSVPFLKNIPPQRTISHYLQQDVPSSQDEVARKKAKRPSETLSLEAHTTIKLEKLEGALQHLGLSPNQTQRKEIRKRLQSDADGSVTYGDFVRIAREVLHL-----NNGLKDRTQSLKNKSLTFQKSIMEEMDTTTTTKVDENENMISCNDEIYRLRRERDEALRDARYYRDLLHEKDADCLQLEEDLQVTQQQVAVARRECNTLRYESRKEI-EASQ---HQHEQQTEKTIERLEQENSGLRSNSLGTKD-----LKDLQKRLVVVGCQLRKTEISKRSYEVAVDKLTKFVEKVH----------LNLDSQQDTSSSKRT--------RNRSKELSSEAKETIRNVKMLLEEEPLPFGWEEVYSPEGTRYYMNHVTQTTSWVHPISSV 713
            N+  V    ++  DP  + + I  ET LG+ + GG ++ +GP ++I +I+ G D + +G L+ GD ++S+N ES +G++ E+AKS ++  KLR +  +++IA++ ++      + I P  NL  TS  +       + +  P+    SL +   +++     S    N+  +S  E+K G +            + + +P    I  + +       DV S+  E    +     E +SL      K EKLE AL +LG+ P + Q + +R+++Q+D+ G+V++GDFV++AR +  L     N G  + +  L ++ L    S  +EM+                     RL+ ERD+AL++    ++ L E D    QL E+LQ  +Q+      E   LR  SR  + EA+Q   H  E   E+ I  LE + + L++      D     ++DL+KR++V+ CQLRK+E++++++E + +KL  FVE +            NL  ++   +S+ +        R+    L+ E+KE +++V+ LL+ + LP+GWEE Y+ +G +Y++NHVTQTTSW+HP+ SV
Sbjct:    4 NTSTVVSPSLLEKDPAFQMITIAKETGLGLKVLGGINRNEGPLVYIQEIIPGGDCYKDGRLKPGDQLVSVNKESMIGVSFEEAKSIITGAKLRLE-SAWEIAFIRQK-----SDNIQP-ENLSCTSLIEA------SGEYGPQASTLSLFSSPPEILIPKTSSTPKTNNDILSSCEIKTGYN------------KTVQIP----ITSENSTVGLSNTDVASAWTENYGLQ-----EKISLNPSVRFKAEKLEMALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEME---------------------RLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVVEETRALR--SRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSV 531
The following BLAST results are available for this feature:
BLAST of TCONS_00004148-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STXB49.778e-6929.23Syntaxin-binding protein 4 OS=Homo sapiens GN=STXB... [more]
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