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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00004175-protein ID=TCONS_00004175-protein|Name=TCONS_00004175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=413bp
MSWRLSVLTLFLVASTISSAKLVPKQGLNITEICINSNILLSKCNCNDLL
CLCGTVSPRKVTIPPGASLETVCQLLSVKNCTTHHPLVKPYLKKSPDQYI
IKCRPFIRRFRAIFTIVFSVLGFVGNGFVMMVTMVNWERSTKCHKLIGGL
AVGDFIFSIIQIIDVSPYLRRGGNICDYIYGQIGCKLISSLLILSSLVSL
GFILIITLERFIGIIYPFSRGLSSLKLKAIVLLNTILSISLIIPVSIVLE
YDPIPKRCWENWAWYGHKEASRIYTWTVFILNDVLPLICLVTMYGKIIHR
LLNTTTEINNFQQKQRHKENKRIIIILLIVVICYFVLVLPDRIVWVLIDE
RLVNVDTNDFSLLKLYMKLPIVVHAVVNPVIYSIVDHKFRKSLIRIFIKG
SRRQEDSGRIGTK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 110..134
score: 21.78
coord: 143..164
score: 20.83
coord: 192..214
score: 23.79
coord: 323..347
score: 20.89
coord: 275..298
score: 22.18
coord: 364..390
score: 24.72 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 125..382
e-value: 6.7E-23
score: 81.2 |
| IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 198..214 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 101..412
e-value: 2.9E-42
score: 144.0 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 79..405 |
| IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 125..382
score: 25.627 |
Blast
The following BLAST results are available for this feature:
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