TCONS_00004188-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004188-protein
Unique NameTCONS_00004188-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length471

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004188-protein ID=TCONS_00004188-protein|Name=TCONS_00004188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MPSLSRRACTKSKGQPNLLHTAWYRHHQNPYHPQQNPDGIINLGTAENRL
LFDLIQEKLADIKLDQMHESYTHYCKLSGTDAFRQKLSAFFNRFMHPQEK
IVEQDVYVMNGCGTVIETIGRSICNEGDGVLIPAPYYTGFKSDLEQRIAV
KTIPVHLDCQGKQAFQITLQKLEEALEGAEDSGIPVKALLLSNPNNPLGT
VYTEEELEMMAEFCYNNDLHLVCDEIYLLSVYDQNASFKSLLSIKNFHKY
RDHIHVVWGFSKDFSLSGFRVGVAITKNEELQHDLGSQGYYTSVSTVTQY
ILEEMITDSQWLDKLVQINHQRLQQNRNLVAKKLSQTNIPFVYPQSGLFV
WMNLSKCMKDQSLQNETELFEQLMNNGLYLVPGQAFETKENGWFRMIISN
EYQTVELALKRLLKTVRNFSSDFVQSIIRKSITFEEIGHRRGSTETVVAL
ETSIRKLRNKQQKEMSQFLIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002336XLOC_002336Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004188TCONS_00004188Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_sub2
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR004839Aminotransferase_I/II
IPR004838NHTrfase_class1_PyrdxlP-BS
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availablePRINTSPR00753ACCSYNTHASEcoord: 219..242
score: 34.49
coord: 127..148
score: 52.46
coord: 285..308
score: 29.92
coord: 43..69
score: 33.88
coord: 253..277
score: 43.87
coord: 183..207
score: 49.64
NoneNo IPR availableCDDcd00609AAT_likecoord: 41..412
e-value: 4.06702E-62
score: 206.809
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2GENE3D3.90.1150.10coord: 307..419
e-value: 4.4E-20
score: 71.5
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1GENE3D3.40.640.10coord: 79..306
e-value: 3.4E-38
score: 131.0
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 41..410
e-value: 2.3E-59
score: 201.3
IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding sitePROSITEPS00105AA_TRANSFER_CLASS_1coord: 259..272
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 11..417

Blast
[Close]
BLAST of TCONS_00004188-protein vs. Swiss-Prot (Human)
Match: 1A1L2 (Probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 OS=Homo sapiens GN=ACCSL PE=2 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 1.175e-85
Identity = 137/397 (34.51%), Postives = 232/397 (58.44%), Query Frame = 0 
Query:   26 HHQNPYHPQQNPDGIINLGTAENRLLFDLIQEKLADIKLDQMHESYTHYCKLSGTDAFRQKLSAFFNRFMHPQEKIVEQDVYVMNGCGTVIETIGRSICNEGDGVLIPAPYYTGFKSDLEQRIAVKTIPVHLDCQ----GKQAFQITLQKLEEALEGAEDSGIPVKALLLSNPNNPLGTVYTEEELEMMAEFCYNNDLHLVCDEIYLLSVYDQNASFKSLLSIKNFHKYRDHIHVVWGFSKDFSLSGFRVGVAITKNEELQHDLGSQGYYTSVSTVTQYILEEMITDSQWLDKL-VQINHQRLQQNRNLVAKKLSQTNIPFVYPQSGLFVWMNLSKCMKDQSLQNETELFEQLMNNGLYLVPGQAFETKENGWFRMIISNEYQTVELALKRLLKTVR 417
            + ++ YH  +N  G INLGT+EN+L  DL+ E+L +  ++ + ++   Y    G    R++++ F   +     ++  ++V V+NGC +V   +   +C+ G+  L+PAP+Y GF         V+ IPVHL+ +        FQ+T+ KLEEAL  A   G  V+ L+L NP NPLG +Y+ + L    EF    +LH++ DEIY+LSV+D++ +F S+LS+K+     +  HV+WG SKDF +SGFR G   T N+E+   + + GY  S+S +TQ+ L +++ +++W+DK+ +  N  RL++    +  +L    IPF    SGL+VW+NL K +   + + E  L+ + ++N L L  G+ +  KE GWF +I ++E   ++LA++R    ++
Sbjct:  156 YQKDKYHKDKNTLGFINLGTSENKLCMDLMTERLQESDMNCIEDTLLQYPDWRGQPFLREEVARFLTYYCRAPTRLDPENVVVLNGCCSVFCALAMVLCDPGEAFLVPAPFYGGFAFSSRLYAKVELIPVHLESEVTVTNTHPFQLTVDKLEEALLEARLEGKKVRGLVLINPQNPLGDIYSPDSLMKYLEFAKRYNLHVIIDEIYMLSVFDESITFHSILSMKSLPD-SNRTHVIWGTSKDFGISGFRFGALYTHNKEVASAVSAFGYLHSISGITQHKLCQLLQNTEWIDKVYLPTNCYRLREAHKYITAELKALEIPFHNRSSGLYVWINLKKYLDPCTFEEERLLYCRFLDNKLLLSRGKTYMCKEPGWFCLIFADELPRLKLAMRRFCDVLQ 551
The following BLAST results are available for this feature:
BLAST of TCONS_00004188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
1A1L21.175e-8534.51Probable inactive 1-aminocyclopropane-1-carboxylat... [more]
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