TCONS_00004209-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004209-protein
Unique NameTCONS_00004209-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length507

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004209-protein ID=TCONS_00004209-protein|Name=TCONS_00004209-protein|organism=Clytia hemisphaerica|type=polypeptide|length=507bp
KKKLKMSDKTVNKLFDGLVFRMQPGPNKAMIKKLILDNGGRFCRAGEKVE
HINLTDVKNGQSGIHTDFIQLSIERKALQHIETYDLSRPANSSSKMKVDK
NLFGKARQAYTKEEDEAIIEYVTSHQTEYGSDGSTGGNLIWKQMEEKKIT
SHTWQSMKSRFHSHLEHRVTHRPTIITRSSGNSTVAYAVSRDSPIDLVKA
PPPLKPKKKFEEQTKKRTLKKLYSSSSVDPFDQSPRNSIDGKSIGGSSSN
KSDGDGETKELEKAIKEEPSSQENLLLDEDATQSLSEDDDDDDNDNDSII
YSPSNTLQPILTSTCDKENSQSTNENESQSQISQPSNSQSQNSQSCNSQS
QNSQSQINQSNIVYPFPEDEDDENSFDDFDQQLVAAANGSQTSQSSSTSR
LRCSQSENSQTENEIDIENLQNTSGKEAVQSQNNEVDLSPVVKKAKKKKK
KRKQKKLLSPEEPHEFNIKPCTCAKQADYNEAYELMNYFDNLPEDFNWKA
VREKMGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002348XLOC_002348Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004209TCONS_00004209Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015010Rap1_Myb_dom
IPR001357BRCT_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015010Rap1 Myb domainPFAMPF08914Myb_DNA-bind_2coord: 107..171
e-value: 2.6E-21
score: 75.5
IPR001357BRCT domainPFAMPF16589BRCT_2coord: 12..84
e-value: 2.1E-7
score: 31.2
IPR001357BRCT domainGENE3D3.40.50.10190coord: 4..74
e-value: 5.9E-4
score: 19.6
NoneNo IPR availableGENE3D1.10.10.60coord: 75..186
e-value: 1.0E-16
score: 60.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..462
NoneNo IPR availableCDDcd11655rap1_myb-likecoord: 107..167
e-value: 9.77629E-12
score: 59.5545
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 107..167

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004209-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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