TCONS_00004261-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004261-protein
Unique NameTCONS_00004261-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length234

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004261-protein ID=TCONS_00004261-protein|Name=TCONS_00004261-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MTTLPEKATKFFENVSLLQSFPVFIGYLLMILLIPVWKRILPVANNLKMI
MIPYNIICVLLSLAATFLLFYGAFLGSHLYAYEENQYIVYGMAIYTISKN
VELLDTVFMILRHKYRQISFLHVFHHSTILVLGNYAFVYTCYPPIAVPVG
LNSLVHVPLYAYYAKTAISPSLQVSWKKALTIFQIVQFLFDLVFATIGYL
YHGFCIYSIMYGGSMLVLFSNFYYFAYIKKKKTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002366XLOC_002366Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004261TCONS_00004261Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
IPR030457ELO_CS
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002076ELO familyPFAMPF01151ELOcoord: 23..232
e-value: 3.1E-34
score: 118.5
IPR030457ELO family, conserved sitePROSITEPS01188ELOcoord: 118..126

Blast
[Close]
BLAST of TCONS_00004261-protein vs. Swiss-Prot (Human)
Match: ELOV4 (Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.229e-25
Identity = 86/252 (34.13%), Postives = 119/252 (47.22%), Query Frame = 0 
Query:    8 ATKFFENVSLLQS----FPVFIGYLLMILLIPVW-KRILPVANNLKMIMIPYNIICVLLSLAATFLLFYGAFLGSHLYAYEENQY--------IVYGMAIYTISKNVELLDTVFMILRHKYRQISFLHVFHHSTILVLGNYAFVYTCYPPIAVPVGLNSLVHVPLYAYYAKTAISPSLQ--VSWKKALTIFQIVQFLFDLVFATIGYLYHGFCIYS------------IMYGGSMLVLFSNFYYFAYIKKKK 232
            A K  EN  L+QS      +   YLL + L P W K   P    +++++I YN   VLL+L     LF G++   + Y  +   Y        I   +  Y +SK VE LDTVF ILR K  Q+SFLHV+HH T+  L      +           LNS +HV +Y+YY  TA  P +Q  + WK+ LT+ Q++QF       TIG+      +Y+            I Y  S + LF NFY   Y + KK
Sbjct:   33 ADKRVENWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPF--QMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQF-----HVTIGHT--ALSLYTDCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEPKK 275
The following BLAST results are available for this feature:
BLAST of TCONS_00004261-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ELOV42.229e-2534.13Elongation of very long chain fatty acids protein ... [more]
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