TCONS_00004351-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004351-protein
Unique NameTCONS_00004351-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004351-protein ID=TCONS_00004351-protein|Name=TCONS_00004351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MVMTLCTKIDNMGNKPKNSNKPTCSFCHKKGHDASRCFKKKKCFNCQKTG
HISKFCPENKSETGAIRDDVKPAPRTIIKINTCGKTVDFLYGTGSQVTIM
KRQDFEKLPNKPPLQKVERSGTAVDGTPFKFDGITYLNLSFPSSDSNRHR
QYTLEYEPILISSNVNQIFMVLRRRRNLENVKETLKTLHLVTRRKRMRKL
QYNVIGRKFRQSQLTSKSLKSLIYHPTIP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002431XLOC_002431Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004351TCONS_00004351Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR021109Peptidase_aspartic_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 23..39
e-value: 5.3
score: 6.8
coord: 42..58
e-value: 5.5E-4
score: 29.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 41..58
e-value: 2.9E-5
score: 23.9
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 39..70
e-value: 4.7E-7
score: 29.4
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 13..38
e-value: 0.29
score: 10.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 42..58
score: 9.57
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 13..60
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 72..212
e-value: 1.5E-6
score: 28.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004351-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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