Ankyrin repeat protein (polypeptide) - C. hemisphaerica

Overview
NameAnkyrin repeat protein
Unique NameTCONS_00004369-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004369-protein ID=TCONS_00004369-protein|Name=Ankyrin repeat protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
MGSDKDAKKEPTEAQKRVAKAKKEKQMKGFIAQCVQQNQNVEDEERRILS
ILRQGGLDYQPNPDNLHEAAKKGLDHQVIAMLKKGFGVDTLDKDGNTPLF
YASENDRFQTAVILLDYKANVNHKSKHGFTPLMYAAWKGHVDLVSLLIKH
GADVKAVNANNDTALHFAALCGFSMVSLILRQAGAETDPKNSKKKKPLDQ
GETFVKELELTLTEKIPKDSSIEFQESKSLFGIRRVAREVAKYADS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002444XLOC_002444Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004369TCONS_00004369Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 143..157
score: 40.29
coord: 95..110
score: 32.35
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 94..123
e-value: 0.0024
score: 27.1
coord: 160..191
e-value: 340.0
score: 8.5
coord: 127..156
e-value: 2.4E-7
score: 40.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 160..192
score: 8.763
coord: 94..126
score: 10.018
coord: 127..159
score: 14.239
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 134..208
e-value: 2.6E-21
score: 75.1
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 5..133
e-value: 7.2E-21
score: 73.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 66..156
e-value: 2.1E-16
score: 60.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 66..198
score: 34.96
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 65..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableCDDcd00204ANKcoord: 66..180
e-value: 2.23553E-34
score: 120.566

Blast
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BLAST of Ankyrin repeat protein vs. Swiss-Prot (Human)
Match: ANR27 (Ankyrin repeat domain-containing protein 27 OS=Homo sapiens GN=ANKRD27 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.491e-17
Identity = 52/145 (35.86%), Postives = 70/145 (48.28%), Query Frame = 0 
Query:   66 LHEAAKKGLDHQVIAMLKKGFGVDTLDKDGNTPLFYASENDRFQTAVILLDYKANVNHKSKHGFTPLMYAAWKGHVDLVSLLIKHGADVKAVNANNDTALHFAALCGFSMVSLILRQAGAETDPKNSKKKKPLDQGETFVKELEL 210
            LH AA  G    +  +LK G      + D   PL  A +   FQ    LLD  A  N K   G TPL+YA   GH +LV+LL++HGA + A N   +TALH A +     V  +L   GA     N +++  +D  E   K +EL
Sbjct:  748 LHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMEL 892
The following BLAST results are available for this feature:
BLAST of Ankyrin repeat protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR271.491e-1735.86Ankyrin repeat domain-containing protein 27 OS=Hom... [more]
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