TCONS_00004373-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004373-protein
Unique NameTCONS_00004373-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length650

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004373-protein ID=TCONS_00004373-protein|Name=TCONS_00004373-protein|organism=Clytia hemisphaerica|type=polypeptide|length=650bp
MATVKEGEYTMTIYTLIKEQKYGEAIQLLQVELEKHQKSRPALSLLGFCY
YQIQDFANAAECYSELTKVCPESEEYKLYYAQSLYKSFAFQEAMKATYQV
EAPNLHNNVLKLQAAIKYSEDDVQGAKSLVEETTSEDADNEVNLGCILYK
EQRFAEACQKFNNAMNILGYRADLSYNIALCFYKQKQYAPALKHIADIIE
KGIREHPELSVGMTTEGIEVRSVGNTKLLHETALVEAFNLKAAIEYQLKN
YEAAQEALTDMPPRQEEELDPCTLHNIALMNMDANPTSGFEKLQFLLQQN
PFPPPTFGNLLLLYCKFQYFDLAADVLAENAQLSYKFLTPYLFQYLDAVI
TQQTSNEEAFRKFDDMAAQHTDTLRKLTKKVQEARHNHDDEAVKKAVNEY
DEALERYIPVLMAQAKIYWDRDNYQAVEKIFRKSVEFCNEHEIWKLNVAH
VLFMQTKTTGENKYKEAIGFYEPVVKKHYDNILNVSAIVLANLCVSYIMT
SANEEAEELMRKIEKEEENVSYQEPDKKIYHLCIVNLVIGTLYCSKGNYE
FGVSRIIKSLEPYKKKLGTDTWFYAKRCFLSLIENMSKQMIMLRDSIREE
IIQFLEQCEAHGRDVQVVIEQPLNAEPLHAGKNTVTYEARLLKSLFLRLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002447XLOC_002447Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004373TCONS_00004373Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..387
NoneNo IPR availableCOILSCoilCoilcoord: 499..523
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 40..73
e-value: 0.22
score: 20.6
coord: 172..205
e-value: 36.0
score: 10.1
coord: 138..171
e-value: 310.0
score: 1.9
coord: 408..441
e-value: 46.0
score: 9.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 138..171
score: 6.018
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 40..73
score: 8.319
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 408..441
score: 5.281
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 131..377
e-value: 9.0E-16
score: 57.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 14..49
e-value: 4.1E-4
score: 19.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 378..614
e-value: 8.6E-13
score: 47.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 50..122
e-value: 1.6E-5
score: 24.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 394..440
coord: 137..259
coord: 295..341
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 410..517
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 15..200
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 6..73
score: 9.395
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 138..205
score: 9.968

Blast
[Close]
BLAST of TCONS_00004373-protein vs. Swiss-Prot (Human)
Match: TT30B (Tetratricopeptide repeat protein 30B OS=Homo sapiens GN=TTC30B PE=1 SV=2)

HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 460/656 (70.12%), Postives = 544/656 (82.93%), Query Frame = 0 
Query:    2 ATVKEGEYTMTIYTLIKEQKYGEAIQLLQVELEKHQKSRPALSLLGFCYYQIQDFANAAECYSELTKVCPESEEYKLYYAQSLYKSFAFQEAMKATYQV-EAPNLHNNVLKLQAAIKYSEDDVQGAKSLVEETTSED----------ADNEVNLGCILYKEQRFAEACQKFNNAMNILGYRADLSYNIALCFYKQKQYAPALKHIADIIEKGIREHPELSVGMTTEGIEVRSVGNTKLLHETALVEAFNLKAAIEYQLKNYEAAQEALTDMPPRQEEELDPCTLHNIALMNMDANPTSGFEKLQFLLQQNPFPPPTFGNLLLLYCKFQYFDLAADVLAENAQLSYKFLTPYLFQYLDAVITQQTSNEEAFRKFDDMAAQHTDTLRKLTKKVQEARHNHDDEAVKKAVNEYDEALERYIPVLMAQAKIYWDRDNYQAVEKIFRKSVEFCNEHEIWKLNVAHVLFMQTKTTGENKYKEAIGFYEPVVKKHYDNILNVSAIVLANLCVSYIMTSANEEAEELMRKIEKEEENVSYQEPDKKIYHLCIVNLVIGTLYCSKGNYEFGVSRIIKSLEPYKKKLGTDTWFYAKRCFLSLIENMSKQMIMLRDSIREEIIQFLEQCEAHGRDVQVVIEQPLNAEPLHAGKNTVTYEARLLKSLF 646
            A + +GE+T  +Y LI+  +Y EA+QLL  EL++  +SR  LSLLG+CYY++Q+FA AAECY +L ++ PE E+Y+LY AQ+LYK+  + EA +  + + + P  H+ VL+LQAAIKYSE D+ G++SLVE+  S +           D ++NLGC+LYKE ++  AC KF  A+   GY+ DLSYN+AL +Y  +QYA ALKHIA+IIE+GIR+HPEL VGMTTEGI+VRSVGNT +LH+TALVEAFNLKAAIEYQL+NYEAAQEALTDMPPR EEELDP TLHN ALMNMDA PT GFEKLQFLLQQNPFPP TFGNLLLLYCK++YFDLAADVLAENA L YKFLTPYL+ +LDAVIT QT+ EEAF K D +A   T+ LRKLT +VQEARHN DDEA+KKAVNEYDE +E+YIPVLMAQAKIYW+ +NY  VEKIFRKSVEFCN+H++WKLNVAHVLFMQ     ENKYKEAIGFYEP+VKKHYDNILNVSAIVLANLCVSYIMTS NEEAEELMRKIEKEEE +SY +PDKK+YHLCIVNLVIGTLYC+KGNY+FG+SR+IKSLEPY KKLGTDTW+YAKRCFLSL+ENMSK  IMLRDS+ +E +QFLE CE HGR++  VIEQPL  E +H GKNTVTYE+R LK+L 
Sbjct:    7 AQIPDGEFTAVVYRLIRNARYAEAVQLLGGELQRSPRSRAGLSLLGYCYYRLQEFALAAECYEQLGQLHPELEQYRLYQAQALYKACLYAEATRVAFLLLDNPAYHSRVLRLQAAIKYSEGDLPGSRSLVEQLPSREGGEESGGENETDGQINLGCLLYKEGQYEAACSKFFAALQASGYQPDLSYNLALAYYSSRQYASALKHIAEIIERGIRQHPELGVGMTTEGIDVRSVGNTLVLHQTALVEAFNLKAAIEYQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDARPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLIYKFLTPYLYDFLDAVITCQTAPEEAFIKLDGLAGMLTEVLRKLTIQVQEARHNRDDEAIKKAVNEYDETMEKYIPVLMAQAKIYWNLENYPMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQ-----ENKYKEAIGFYEPIVKKHYDNILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDKKMYHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLLENMSKHTIMLRDSVIQECVQFLEHCELHGRNIPAVIEQPLEEERMHVGKNTVTYESRQLKALI 657
The following BLAST results are available for this feature:
BLAST of TCONS_00004373-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TT30B0.000e+070.12Tetratricopeptide repeat protein 30B OS=Homo sapie... [more]
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