TCONS_00004374-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00004374-protein
Unique Name	TCONS_00004374-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	479

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00004374-protein ID=TCONS_00004374-protein|Name=TCONS_00004374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=479bp
MAWNQKGEISRRKMNKYTAIFAFVGGFVLVFAIWNIQYVYNSSSTKELTT
LTEERMQKIQNEQILRIKDLLFPDKGNTTSIPTTKSTAQTPTSESVIVKQ
LNEIRNNMKDFDDKIKKLADWESYRVQREKLKTLVHVQNSKESENKKYSM
FRPHVLVDKVTLDCKEHYKVIVLVTSFAKHFDRRQWIRKAWGNQTFWNET
HEHWQVIFNIGAVQRDMKDTYDKLMEESQKYGDMLILDIQEDFHKLSQKV
MTALFWVYTKFNFEFVFKSDDDVFIHMQRLLTKLNGTWSKENFVGNAMFG
QPPERNKGRYGVSLEEWPKKFFDPYCSGGGYILSHYIIEHMIPYFNWETP
LKIDDAYIGHLVNLAGGKVKHEFKSFLMYNVKLEYSADLVVTHPVKFPPF
REFLEVKAGLELGRIKTHEMQNFTRLRDYQDHKKKLQALLSTTKKTLTKS
VALDVKRSTPTTARTLKDVGLNVTTASPK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_002448	XLOC_002448	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00004374	TCONS_00004374	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002659	Glyco_trans_31

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008378	galactosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0008378	galactosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002659	Glycosyl transferase, family 31	PFAM	PF01762	Galactosyl_T	coord: 182..367 e-value: 4.9E-35 score: 121.0

Blast

[Close]

BLAST of TCONS_00004374-protein vs. Swiss-Prot (Human)
Match: B3GN2 (N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 OS=Homo sapiens GN=B3GNT2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.938e-20
Identity = 66/225 (29.33%), Postives = 112/225 (49.78%), Query Frame = 0

Query:  164 CKEHYKVIVLVTSFAKHFDRRQWIRKAWGNQTFWNETHEHWQVIFNIGAV--QRDMKDTYDKLMEESQKYGDMLILDIQEDFHKLSQKVMTALFWVYTKF-NFEFVFKSDDDVFIHMQRLLTKLNG---TWSKENFVGNAMFGQPPERNKGRYGVSLEEWPKKFFDPYCSGGGYILSHYIIEHMIPYFNWETPLKIDDAYIGHLVNLAGGKVKHEFKSFLMYNVK 382
            C +   +++ + S   HF RRQ IR++WG ++  N  ++    +F +G    + +  D  D L  ES+K+ D+L+ + ++ F  LS K +  L WV T   + EFVFK DDDVF++   +L  LN    T +K+ F+G+ +    P R+K       E      + PY  GGG++ S ++   +    +      IDD Y G  +    G V  + K F  ++++
Sbjct:  138 CAKKPFLLLAIKSLTPHFARRQAIRESWGQES--NAGNQTVVRVFLLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLYPPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKL-GLVPEKHKGFRTFDIE 359

The following BLAST results are available for this feature:

BLAST of TCONS_00004374-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00004374-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B3GN2	1.938e-20	29.33	N-acetyllactosaminide beta-1,3-N-acetylglucosaminy...	[more]

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TCONS_00004374-protein (polypeptide) - C. hemisphaerica