TCONS_00004518-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004518-protein
Unique NameTCONS_00004518-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length947

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004518-protein ID=TCONS_00004518-protein|Name=TCONS_00004518-protein|organism=Clytia hemisphaerica|type=polypeptide|length=947bp
MISAWQILLSAIFILLIWMFNKAKEIYTQLNKKNNKIPDVKVLEKIIPLS
NNIGWQVKGVCNGVPIWKYKATFTFAPRNLYGCRALLLGKPETILEQLLN
IRTFNTIFSHFPSLKKENDSWKKANSDILSLSNVNTSLSLTSILTSHHKS
FTLERCWFQNEKNGWLYMCPTSTLLSAQYGYWIFFSIQELSFDNTCLLHI
LSTYPKTTSFSYISDHLSSCLVLCRERMDSLCLLKINENIKDPSEIRKTV
SPNVPEEKATEKADHPEPPLSEKKKVKKDLGKEAFGVIEEPAIISTTVQN
VEAINTEVSDKDSPIKREEDQSTKKSLEAALKPQKNLSKFGYDPKLDEYC
KQLMKAYETMLEIYEADESTPNWDSLGTKDAVRILKRDGDEVSASGTYKG
TAVVKVPLDYLLHYCHTLEYRNEFDTLFETGYDLVTFDDGVSKINNLLYQ
NVWPTTGRDFCSITALRHLKDNIYASVVTATTHEECPERNNKVRGEVIIA
GYVFKVLSEDPPEVEITYVTRADLKGSIPGRITKRVNAEQPLLAGRIRKH
CERRYEIRDPPLDGITILEKIKAVPSIFEEPPQPLEPPLEEKEEITNNEA
ETDDKILNEDAQSDDVLSTSTPVVERKPTIESVSSSIQTGDTIDGETSNY
IMDNGFDLQENFYSKSPDGGGQVELPRPRRMTSEDSLLDGSESIGDLSQV
EFTEDQTNVSISEQPLDLPRDSFGKIDYVTLGNQAAALLEEEFIKAKSIS
STNHGDMNTSADNWVYQTTSKEVEILRKVHSSSKFHSFLARGFINALPVT
VWEAIKNPTTRFVYDNMLKKTTVVKEISDRHRILHMRHETTACFVKQARD
FCILTCERVEQQRYSLVATSVEIPECPPVRDCVRGKILSSGWIVEPMMHN
GRYCSMVTYVTQVDFGGRLPTRIINFIAKRQPLSLAYLRDFLESSEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002540XLOC_002540Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004518TCONS_00004518Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008289 lipid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002913START domainSMARTSM00234START_1coord: 353..557
e-value: 0.0038
score: 21.8
coord: 741..947
e-value: 0.029
score: 8.1
IPR002913START domainPFAMPF01852STARTcoord: 361..552
e-value: 1.5E-11
score: 44.0
coord: 758..930
e-value: 5.4E-17
score: 61.8
IPR002913START domainPROSITEPS50848STARTcoord: 366..531
score: 16.909
IPR002913START domainPROSITEPS50848STARTcoord: 759..925
score: 22.374
IPR023393START-like domainGENE3D3.30.530.20coord: 709..946
e-value: 5.6E-42
score: 143.2
IPR023393START-like domainGENE3D3.30.530.20coord: 293..563
e-value: 4.2E-36
score: 124.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..274
NoneNo IPR availableCDDcd00177STARTcoord: 358..553
e-value: 1.2306E-33
score: 128.225
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 757..936
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 362..550

Blast
[Close]
BLAST of TCONS_00004518-protein vs. Swiss-Prot (Human)
Match: STAR9 (StAR-related lipid transfer protein 9 OS=Homo sapiens GN=STARD9 PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 1.012e-22
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 0 
Query:  763 NWVYQTTSKEVEILRKVHSSSKFHSFLARGFINALPVTVWEAIKNPTTRFVYDNMLKKTTVVKEISDRHRILHMRHETTACFVKQARDFCILTCERVEQQRYSLVATSVEIPECP-PVRDCVRGKILSSGWIVEPMMHNGRYCSMVTYVTQVDFGG-RLPTRIINFIAKRQPLSLAYLRDFL 942
             W YQ   + V++  KV S ++ H FL  G ++     VW A+ +PT   +Y   ++   + + +++   ++++   TT C +KQ RDFC +  E  E     + A SV     P P R  VRG+IL S WI++P+   G+  + V Y+ QV+ G    P ++++   KRQPL +A L  FL
Sbjct: 4518 GWNYQGEEQAVQLYYKVFSPTR-HGFLGAGVVSQPLSRVWAAVSDPTVWPLYYKPIQTARLHQRVTNSISLVYLVCNTTLCALKQPRDFCCVCVEAKEGHLSVMAAQSVYDTSMPRPSRKMVRGEILPSAWILQPITVEGKEVTRVIYLAQVELGAPGFPPQLLSSFIKRQPLVIARLASFL 4698
The following BLAST results are available for this feature:
BLAST of TCONS_00004518-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STAR91.012e-2232.42StAR-related lipid transfer protein 9 OS=Homo sapi... [more]
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