TCONS_00004657-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004657-protein
Unique NameTCONS_00004657-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length280

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004657-protein ID=TCONS_00004657-protein|Name=TCONS_00004657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
MAAALPPTLKQINSYLKLAKEYDKRDPTVAYFCRMYAVHKGIKLDSKSPE
AKKFLFGMMDNLENVKKELTGQGDESVTNDIVGQAHLENITVNLFTWADG
EDRKANFNKNVVKAFYSSSLLYDVLTQFSELSEECSMQQRYAKWKATEIH
KCLQRGETPVPGPAGSEFEGTEFGATTSGIGSMQLNDGSANTPYPPANMD
QPGPSGYTPEPVPAPRKPSNQAPPPSSGYVAPAQASVENSHVDFQECSKL
CKYAMSALDYEDVDTAVANLTKALNMLQNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002627XLOC_002627Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004657TCONS_00004657Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023175VPS_Vta1/CALS_N-dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..280
NoneNo IPR availableGENE3D1.20.5.420coord: 239..278
e-value: 2.8E-16
score: 58.2
NoneNo IPR availablePFAMPF04652Vta1coord: 11..154
e-value: 1.6E-44
score: 151.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..232
IPR023175Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domainGENE3D1.25.40.270coord: 1..160
e-value: 6.5E-55
score: 184.9

Blast
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BLAST of TCONS_00004657-protein vs. Swiss-Prot (Human)
Match: VTA1 (Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens GN=VTA1 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.324e-74
Identity = 129/292 (44.18%), Postives = 174/292 (59.59%), Query Frame = 0 
Query:    9 LKQINSYLKLAKEYDKRDPTVAYFCRMYAVHKGIKLDSKSPEAKKFLFGMMDNLENVKKELTGQGD-ESVTNDIVGQAHLENITVNLFTWADGEDRKANFNKNVVKAFYSSSLLYDVLTQFSELSEECSMQQRYAKWKATEIHKCLQRGETPVPGPAGSEFEGTEFGATTSGIGSM--QLNDGSANTPYPPANMD-------QPGPSGYTPEPVPAPRKPSN-------QAPPPSSGYVAPA------QASVENSHVDFQECSKLCKYAMSALDYEDVDTAVANLTKALNML 277
             K I  +L+ A+E+DKRDP VAY+CR+YA+  G+K+DSK+PE +KFL  +MD LE +KK+L   GD E++T +IVG AHLEN  + +F +AD EDR   F+KN++K+FY++SLL DV+T F EL++E    ++YA+WKAT IH CL+ GETP  GP G E +        +G  S+  Q    S+++ Y P+NM        Q  P  + P   PA    S        Q  P +   + PA      Q  V  +  DF    K CKYA SAL YEDV TAV NL KAL +L
Sbjct:   14 FKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQL---GDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLL 302
The following BLAST results are available for this feature:
BLAST of TCONS_00004657-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VTA12.324e-7444.18Vacuolar protein sorting-associated protein VTA1 h... [more]
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