TCONS_00004674-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004674-protein
Unique NameTCONS_00004674-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length356

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004674-protein ID=TCONS_00004674-protein|Name=TCONS_00004674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
QPYKFHNLDIELPYSATLTRDEGLHYYREMVTIRRFEQEASKLYKEKVIR
GFCHLYSGQEACAVGMTATLTPDDSVITAYRAHGWTYLKGRSVKQVLAEL
TGRKGGCTQGKGGSMHMYAHEFYGGNGIVGAQVPLGAGVAFAHKYRGNGR
VCVTLYGDGAANQGQIFETFNMAALWDLPCIFVVENNGYGMGTSSNRASA
VDEFYTRGDFIPGISVDGNCVISVREASKYAVDHAKNKGPILLELNTYRY
FGHSMSDPGTSYRTRDEIQETRQKRDPINGFKERLVGLELATQAELKKVD
QEVKKMVDEAVQFARTDAEPPRDDMAMFIYSEGTGGESVRGSDLFTQFPT
NDRLNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002634XLOC_002634Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004674TCONS_00004674Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017597Pyrv_DH_E1_asu_subgrp-y
IPR001017DH_E1
IPR029061THDP-binding
Vocabulary: Biological Process
TermDefinition
GO:0006086acetyl-CoA biosynthetic process from pyruvate
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:0008152 metabolic process
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..344
e-value: 1.1E-86
score: 290.5
NoneNo IPR availableCDDcd02000TPP_E1_PDC_ADC_BCADCcoord: 26..314
e-value: 2.14539E-145
score: 414.971
IPR017597Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup yTIGRFAMTIGR03182TIGR03182coord: 21..330
e-value: 4.3E-129
score: 427.9
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 29..320
e-value: 8.7E-114
score: 379.4
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 16..332

Blast
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BLAST of TCONS_00004674-protein vs. Swiss-Prot (Human)
Match: ODPAT (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1)

HSP 1 Score: 439.499 bits (1129), Expect = 1.582e-154
Identity = 207/339 (61.06%), Postives = 260/339 (76.70%), Query Frame = 0 
Query:   13 PYSATLTRDEGLHYYREMVTIRRFEQEASKLYKEKVIRGFCHLYSGQEACAVGMTATLTPDDSVITAYRAHGWTYLKGRSVKQVLAELTGRKGGCTQGKGGSMHMYAHEFYGGNGIVGAQVPLGAGVAFAHKYRGNGRVCVTLYGDGAANQGQIFETFNMAALWDLPCIFVVENNGYGMGTSSNRASAVDEFYTRGDFIPGISVDGNCVISVREASKYAVDHAKN-KGPILLELNTYRYFGHSMSDPGTSYRTRDEIQETRQKRDPINGFKERLVGLELATQAELKKVDQEVKKMVDEAVQFARTDAEPPRDDMAMFIYSEGTGGESVRGSDLFTQFPT 350
            P +  LTR EGL YYR M+T+RR E +A +LYK+K IRGFCHL  GQEAC VG+ A + P D VIT+YRAHG  Y +G SV+ +LAELTGR+GGC +GKGGSMHMY   FYGGNGIVGAQ PLGAG+A A KY+GN  +C+TLYGDGAANQGQI E FNMAALW LPC+F+ ENN YGMGTS+ RA+A  ++Y RG+FIPG+ VDG  V+ VREA+K+A ++ ++ KGPIL+EL TYRY GHSMSDPG SYRTR+EIQE R KRDPI   ++R+V  +LAT  ELK++  EV+K +D+A QFA TD EP  +++   IYS  +  E VRG++ + +F +
Sbjct:   49 PVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHIYSSDSSFE-VRGANPWIKFKS 386
The following BLAST results are available for this feature:
BLAST of TCONS_00004674-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODPAT1.582e-15461.06Pyruvate dehydrogenase E1 component subunit alpha,... [more]
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